TCONS_00025549 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025549
Unique NameTCONS_00025549
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2147

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025549 ID=TCONS_00025549|Name=TCONS_00025549|organism=Clytia hemisphaerica|type=transcript|length=2147bp
gcaaaatataaataaaagagaGATGTAATAAATTCTAAACTAATGACACT
GGATCAAGTCTATACTCCATCATGATGCAACAATATATGGATAATGATAT
TGAAGATATTGTTGATGAGATCACCAACGAGAAATTCATCACATTCTGTG
GTATAGATGGATGTAATGAAACTATTCTAGATGCTGTTCGAGAACTTGTC
AAAAGTAGCGTGGAACGTTTGGTATGGACTGAAAAGAAGAGTAGAGATGA
AGTCATTTCAATGGAATCACCTAAATTAGAGGCTATGTTCCGAAATGAGA
AAAGAACCTATGAGTCAATGTCTACTCGAGCATATGAGAGACTGAGGAAC
AGTAGGCAACAACCAAATATTCAATCTTCGTGGAGCAATTCAAGCACCTC
AAACAATCACCAACAGGTCTCCTGCAGCCAACAACAAACGGTACAGACAG
AAAAAGATGTCCCCAAGGTTACACAGATACAATCATTCGTACAGAAGCCA
ATCCATACATTAGTACAGCCAAATACTACCAAAGCAGCAAACACAACAAC
AACGACTGCCTCCAAAAGCAAAGTCATTGATTCTTCTTCAAAATTAGATA
TAGAAATATCTTATTACGAGCAAGACGTTGATGTTTGGTCACGTGTAAAA
GGTCTGGAGATTCGCGGTCAGACTTACAAAGTGTCGAGCAATGGGTCTTG
TCCAACCTGTGGCCACAAATCCAACATTTTTGTCATCCTCGACCAAGAGC
GACGTTCCTTCAGACGAAAGCCATGATGGCGACCACCACCGCAACCAATC
AGACGGAGATTTTGACCACGATCGAGAAGATGGAAGCAGTGTAGATGACG
AGGAAGAATATGATGAAGGGCATGTTGATATCGAGTTCTATCGCAAGGTT
GTCTCTTGGTTTGTCCTTGATGATTATGTTGATGAGAATGACTCTTTGAT
ACCAGaCGAAGAGAAAGACATGATTCGCACTATGTTAGCTTTAGAACAAG
CTCGAAACGATTTTATTGATGGCAAAATGAAAGTACGCCTACCAACTCCT
GATCCACCCGCGGTAGAAGAATCGAATGACGTCATCTTAATCTCGTCCCC
AGAGCACCAAGATGAAGATTCGAATGGTATACCTTCGAAGTCGAATTCGA
ACGGAAGTTCGCCTCGAAGTAAACAAACCGAACATGGTTTTGACAACGAG
AAAGCAAAGAAAGTGCcagaaaaagaaaagtACGACCTTGAAGATTTTCC
GGTGTCCACGAACGGTGCTTGTCCGTATTGCCACTCTAACAACGTCGTCT
ACATCATTCTCAAGGAGAGCGAAAACGAAAAACGACAGTTACCTGATTTG
TTGGTCCGGTTGGTGGGTGATGGGAAAGCGGAGGTTAACGTCAAAGGTGA
TGACGAATGGCCATCCTTCCAATGTCGGAATTGCACTTACGGCTTCAACT
TGGACTGGAACAAAACCAACTTAGAGAAAATTTTCTATCCTACACATCAT
GACAAATCAAAATCTACTTGGAGCAGACCATTAGCTAATTCAACAGTGAC
GAGTACGACGTCCTTGACCCTAAACCGGCCTATCGGAGTCGGACAACATC
CTATGGCACCCGGCATTCCAAGCGCAATGGCTTCGCAGCAGCATGTACCA
CACCTTTCGACTCTACCTCGGGTCCCCTTTCCTCAACCTTTCATACCGCC
TCTCATGTGGGGTCCAATGATCCCACCACCAATGCCCTTCCCTGGTATGA
TACCACATCCTCTACCGATGCAGCCTGCTCCTATGTATCCTATGGCCAGC
GTCTCTCAACAACCAGTAAGGAGTGTGATACCTCAGGGTGCAGTACCTGT
CCCTTCGTCACAGGTGCCGATCACAGTCGCCTCCCAACTTCTTGCAGCCG
CGCAAAAGGCTAAAGAGAGTCAACCAGCGCCAACACCTCAGCAGCCCCTT
TCACAGCCTACCAACGTTGCTAGTGCTAACATTTCGGAAGACGAAAAAAT
CAAAGCAGTTATGGCGCAACAGGCAACTGTTTCCGGAATCGACCCTGCAC
AGTATGAGAAAGCGAAAGTCCCTCATCCCATGTATGTTTGCTACCGATGT
GGAGGGAAAGGACATTTTGTTCGACAGTGCCCAACTCACgaggtaag
Run BLAST on NCBI

transcript from alignment at sc0000539:124284..142596+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025549 ID=TCONS_00025549|Name=TCONS_00025549|organism=Clytia hemisphaerica|type=transcript|length=18313bp|location=Sequence derived from alignment at sc0000539:124284..142596+ (Clytia hemisphaerica)
gcaaaatataaataaaagagaGATGTAATAAATTCTAAACTAATGACACT
GGATCAAGTCTATACTCCATCATGATGCAACAATATATGGATAATGATAT
TGAAGATATTGTTGATGAGATCACCAACGAGAAATTCATCACATTCTGTG
GTATAGATGGATGTAATGAAACTATTCTAGATGCTGTTCGAGAACTTGTC
AAAAGTAGCGTGGAACGTTTGGTATGGACTGAAAAGAAGAGTAGAGATGA
AGTCATTTCAATGGAATCACCTAAATTAGAGGCTATGTTCCGAAATGAGA
AAAGAACCTATGAGTCAATGTCTACTCGAGCATATGAGAGACTGgtattg
attttaatatttttgattttttttgtttttaattctgAATGAGTGCGTGA
TGATTATAACATGATAATTATTCATAACATTTTATCCGATCTTTTCTTAA
ACATTTTGACACCTTTTGTTTGtgataaaaaatctaaaattgataaattt
tttattgaaataatatGTAAGTACCTAAAATCGGCCCCTTCGTTTACCAT
GGTTTGCCATTATTAGTTGTCCAAGTCTGCTATATGACtgtaaaaacatc
caaatttcatattaattgtcattgAAACCTGTATTCGGTtaatattcact
tttttctcCAATGATAGAGAAACAGTAGGCAACAACCAAATATANattga
tttttaatatttttgaattcttttgtttttaattctGAATGAGTGCGTGA
TGATTATAACATGATAATTATTCATAGCATTTTATCCGATCTTTTCTTAA
ACATTTTGACACCTTTTGTTGGggataaaaaatctaaaattgataaattt
tttattgaaataatatGTAAGTACCTAAAATCCGCCCCTTCGTTTTTACC
ATGGTTTGCCATTATTAGTTGTCCAAGTCTGCTATATGACtgtaaaaaca
tccaaatttcATATTAATTGTCCTTGAAACCTGCAATCGGTtaatattca
cttttttctcCAATTATAGAGGAACAGTAGGCAACAACCAAATATTCAAT
CTTCGTGGAGCAATTCAAGCACCTCAAACAATCACCAACAGGTCTCCTGC
AGCCAACAACAAACGGTATATtttagtattcatgatatgcaccactggag
agtcttctgagaactttcaaaattttccacccaatacgtcacttaaacaa
tagaaaaccAATAAAGTAAACCAATGAGCGAGGTAAGCGTTTTTATGGCA
GGGGACTACCACTGTCAACCTCGTGtgttttcttaataaataattcatta
taattattttttttaaataaaaaatcaagacGAAAGTGCTCGGTACCAAG
TCAGACTTAACTGATGAtagttttcaacattttgtcCCCCAAGTTGTTGT
TGGTTGACTCCAGATGTGATTTAAAAGATCAGTTGGATctttttgccact
aatttttaCCCTATCCTACTAAAAATTGTATTTAGCAGATTGTATATAAT
CACTACAGATAAAGATTAAATTGAAACATTTAAAGGACTCACTGCACATT
ATCTGGTCTTATCAAAATGCAATCTATTTTATCAGGTACAGACAGAAAAA
GATGTCCCCAAGGTTACACAGATACAATCATTCGTACAGAAGCCAATCCA
TACATTAGTACAGCCAAATACTACCAAAGCAGCAAACACAACAACAACGA
CTGCCTCCAAAAGCAAAGTCATTGATTCTTCTTCAAAATTAGATATAGAA
ATATCTTATTACGAGCAAGAGTAAGTTATCAGTCACTGATTTACCTATAA
TAAAGTGTTAAAATTTTAAGGAATGGTTGCATTAAACAATTCTTCTTAAG
CATATCTAAGGCAATTACAGGCAATTATAACCCGAAGTCcacttaaaaag
atttttgatagatTTGATGGTGCGATTAAGTGGCTCGGTAGTATATGTTA
GTGCTTAGATGGACTGacgactgtaaaacagtccacCAGATCTGGCCAGA
TTGTAGTTGTTTTTTGAAGATAAAAATAGGATGAAGCAACGTTTTTATTT
AATGTTTAAAGACTCAATTATACTCCTGCTTTACTTCTAGGGTGACTTCC
CAAATGATTCTTGATTGCTCTCAAGGGAatactttctttaaaaatctgCA
TTGCTTGATTTACCTTTCAGCGTTGATGTTTGGTCACGTGTAAAAGGTCT
GGAGATTCGCGGTCAGACTTACAAAGTGTCGAGCAATGGGTCTTGTCCAA
CCTGTGGCCACAAATCCAACATTTTTGTCATCCTCGACCAGTAAGTATAA
TTAGTATATTAAGCTGGGTTGTTTACAAAATATAGCTATCGTCAACCGTA
ACTCAAAATAGGATTTGGTTTTACCCAGGGCGACTTTTCTTTTTGCCTTG
TAACTCCGGGAAACTCTAATTCTATTTATACTAATAGCTTTTGGTGCATG
GGTACATTATAGGTATTAAATAACACAATGTACTCAATCAAAGAATGAGA
GAATCCGCATAACGaatctttatttttatcaaattagggtatttttttta
ttcaggtATTTATTTAGCCAAATATTTACAACAGTAATTTTTGCTATAAA
ATATTGACAATAAGACGGTTTCAATATCACGTTGCAGTCTGGTTAttatg
agaaaaatataaaatgaacaATTTAGAAATAGGAATTAAGAGCTTtaaat
gaataaattttagTTGTCTGGGTCTTGGACTTTTAGTCgaatttattttt
taaggaTATTATTACGGATTTACCAATACCGCCGAAAAATAGGTCCTTTG
AGAttaattttaatatttattggTTTATGTAGAGTGTTAGATTTGAAGAT
TTGTATTTTTCTGATAAAGTAAAAGTTACGGTAAgtgaattttcaacaaa
atgtgTTTGAAACGATGACCTTGAGTGTAATGTTCATCTGGATCCATGAC
TCGACGTGACAAACACAATTGCTGTCATGTCTACTCACAAATCATTGTAT
GATCTTTTTGTAAAGCAAGGCAAACAGGTGAGGCTCTactatttgacaaa
atatccgggtgaaaatattatatattattgCTATAGAATAGTTCGTTATT
TACGGCTTTTTAGCTCATGTTTTCGTTCCTTTTAACTAGCCTCTAATTAT
TTTTCGTCTTATTCTCTTTTAGCCTGTTTCCCGCTGGAGATATGCCAGAA
CTACTGAATACATTGCTGAGTCAAGGAAAGGCTGTCCTATGGTCAAGCAA
ACAAAACATGAATTGCAAGGTTCGCATAGAAGAGTTTTTTATCTTATAGA
ACccttttttagttaaaattatgaactttttattaaaatttgttaaaatt
atttaaatttatTGTGTATTTTTGTATGTGTGTCTTTGTTTGTCTATGTG
GCGTATTCCGTTATattatatcatttttaattacttGGTTACAGTAAGTC
GAGTATTGTTACATACAACAATTGGGTTATGGCCTTTTTAAAACTAACAG
CGGTAATTTTGGctccttttttattttggtagGTATATCTTTATCATTTT
ACTTTTAGTAACTTTTATTTACTATTTAGCATAATTTGAACTATATGTAC
agcattttctaaaaaaacctttttttttcttcatcgaTTTCCGTCTAGGA
TCCGCCCACTTTCTTATGTAGTGGAAATTGTCCTTTTACGAACATCAAGA
AATGTGGATTCAATTTGGATTGGAAGCAAACAGACctggaaagaattttt
tcaaaaagtcggGGAGCTCAAGAGGTAGAACATCAATCTTCCTTTTAATT
TCttgtcttttactttttttaaatacactacatttctctttccttttttt
tttgatacattCTCAATCCTGTCTTGATTTCTAGCGTAGCAATATTTTGA
CGACAgtatctttctttttcttttctaggATGACCATGGTAAGGGAatac
aaagattaaaaaaaagaagaagataatTACCAATATCTTACTTTACTGTG
ATGCTGCTCAATAGATATtctgaaaatacatttttgtcaaaaatatattt
ggttTTTGGTCTTGtgttataacaaaaataaatctcGCGTAAAACGAAGA
AACATTCTCACGAAGAGAATGGATTACGAGTCAATTTTCATAGATTGaag
tacagttgactctcgctaattcgaattgGAACTCTCtcatttgttcgaat
tacagagacattcgaatttaaaaaatatttaaagagggtttctccttgac
ggggattgtgaataagttcgaattataagGAGATTCGAGTGTTAGAaatt
cgaataagagagagtcTGCTGTATTACAGAAATCTAATCCACGTCAAAAG
TTTGATAAGGTAGAATTTTTGATTTATCTAATTGTTTGTGTTGTAGAGAG
CGACGTTCCTTCAGACGAAAGCCATGATGGCGACCACCACCGCAACCAAT
CAGACGGAGATTTTGACCACGATCGAGAAGATGGAAGCAGTGTAGATGAC
GAGGAAGAATATGATGAAGGGCATGTTGATATCGAGTTCTATCGCAAGGT
TGTCTCTTGGTTTGTCCTTGATGATTATGTTGATGAGAATGACTCTTTGA
TACCAGGTACTACTGTAGTAATTCACACAATAGAATGTTTCCAGGcttaa
atggaaaattttttataaacGATTATTTTGATGATGATTCCACAAACTTA
TTGCGGtcttaatttcaaggccgtaaTAAATAAGGTATCagctagacgat
gttatcgtccgttacagtgatagtaaaggcgggaaaaaatggcggtatgg
cgttatggcggtatacggaaaaaaatcggcgggagagttaaTAAGTCGAG
ACTATAATATGGTTCTGTATATAAGAAATTTAGTGTCATTTTAAATCTGC
CTTGGTTTTTATACTACTGATTGGTATTTTCCCATTAAACTTTATAATTT
CTTGGGATTTCTTAACATGGATGATTCTCCTTTCAtcctcttttcttttt
caatgtcTCAAAAACTTTTTGGGTAGAAAGAAATTCAAGCTCAAATCAAA
GCAAGATCGACATACTGCAAAAGCTATTTACAATTTACaagctggaactt
ttttacTTCCCCTGCAAATATTATCATGAGATTTTCATCCACTATGTTTT
TTATCAACATAAAAGTCGCAAATTGCAACAGATTGCAAGCATTTATACTT
CCAATAATTTTTATGTTTGCTTTTGTCTTTGAGCAATGGTGGCGGGGTAA
GATACTAGAACTttctattttcttaaaatggacttttttatataaaagga
ATAGAAATAAGGATTATAATCATCAGGCAAAAAATAACAAACCAACAAAC
TTATAtgatttcatgtttttaaggAATCTTATAAAGCTTAGCTAGATATT
CTTgttgcaaagaaattacaaactcttaaaaaaaatgactgttgataaaa
attagttattcttagaaaagaaagtgtagttccaagaaaatataaaggga
ATAAAAGGGAGAGGGTAtccaaaaagaaagatattatttCTTGGAATCTC
AGTTTCTCTCTCCCgcctatttttattttgttttgatttttttcgaatAC
CGAACACGGCTGGCCTCGCATACTGACACTCAAATTCATAcgattttggc
tgtttttgtattttgcgccaaaatcgtatagtctaagactggcaactcta
ccgactgtaaactcttttcggcaaaaaaacccgtttgcgaactttcttcg
gctttgggcttttttctttgatagtgATTCGAGATAACATAGTCTAGGTA
TCAGCAGGAGGCATTTCAAAGTCAAAGTAAGTGACCTCTATAACCAATGC
ACCGCGAACCCTGGGTCTTTACTGCTTCTTCTGGGTTGTTTCGGTACTGT
ACGGCTTCAGAATTTTTCacatttgctttttcttttagaCGAAGAGAAAG
ACATGATTCGCACTATGTTAGCTTTAGAACAAGCTCGAAACGATTTTATT
GATGGCAAAATGAAAGTACGCCTACCAACTCCTGATCCACCCGCGGTAGA
AGAATCGAATGACGTCATCTTAATCTCGTCCCCAGAGCACCAAGATGAAG
ATTCGAATGGTATACCTTCGAAGTCGAATTCGAACGGAAGTTCGCCTCGA
AGTAAACAAACCGAACATGGTTTTGACAACGAGAAAGCAAAGAAAGTGCc
agaaaaagaaaaggtatGTTTTAAGTTTATTAGACGAGATCAAATtgatt
tattgttctacgggcccgacctaCCCTGTACTTTCCAAAATCGATTGAAT
AATAAGATAAGATTGAAGTTGCAAAGTTTCAGGGATAGACTTGATAAGTT
TTTTTGCTGATATCTTTAACTGAACCTGTTGAAAATTGTGAATTCAGTCT
tcccgtagaacaataaattaaatttgtctcGCCTTATTTGACTTTGGTCA
TTCATCACACCCCCTTTTGTTCTGAATGAAGCACTGAGCTTTGTATTTAA
CCTTGAGGAAGTTTCTCGATCAGACATTTTTTTNCCCTTTTGTTCTGAAT
GAAGCACTGAGCTTTGTATATAACCTTGAGGAAGTTTCTCGATCAGACAT
CTGGAATTTTTTTGTGGTACCCTACTagtggtagcactactcaattGCGG
TGTatatgcatcgagagcgctagcgACTATACTTTGGATGATGTAGTGCC
GTTGGATGTTAATATTTAACAATGCAATGGTTTCTTTGCGTGTACCAATT
TCAAAAGAGCGCCGATCAAAGTAACAaacacctcactaaaaaccgggatt
tttcatcttgtttcttagtgagttccactttgacgatttttgaaaaatag
aagcctttcaagtgttttgatgCAAATTCGAGTTTTCCCTACTGCAaggg
cttcaaaagtttaaagtgacttcaagaaatcgaatgtttggagcccgaaa
acctgggctcaaaacattcgaaaaagtcgcaaagtggaatagacgtttat
gttcaaaagctcatttaatattcatcccaaatttgaatgaaaaagattaA
GACTGTGCGCCGAAGTAGGCAtattctcttacggagccatgacCTGTATA
TTGAATCCGTGTCATTCGCGGAGAATCAGAATCTACTCGGAGATTGTTCT
GCTTAAAATTTGTTTGGAACATTGCCAAATCGCCTGAAAAAACAAATTGG
TTTGTATGACCGAATACTATATAAAAATACTGACCTATTTTACTGTGTTG
CACGGGTTATAAACGACATCAATCtactttttcatattttagtACGACCT
TGAAGATTTTCCGGTGTCCACGAACGGTGCTTGTCCGTATTGCCACTCTA
ACAACGTCGTCTACATCATTCTCAAGGAGAGCGAAAACGAAAAACGACAG
TTACCTGATTTGTTGGTCCGGTTGGTGGGTGATGGGAAAGCGGAGGTTAA
CGTCAAAGGtatagagattttttttcagtttggtTTGTCACgtaactttt
taaactttttgaggGGCGACGGTCATGGTGCCATGGCGCCAGCACCTGAA
GTTTCCGGTTCTAATCGACATTCTTTCCAATGAACACTGGGCATCCACGT
GAAATATTGACTCTATCTACCAATTTCCACTGTTATGAGAGATAACATTT
GATTTTCGCAAAGCAATCGCCTTTCCGAATTCGAATAATTTCTATCATAT
TTTTATCATTGTGCTTACCTGAAAGGTCCTCAATCTTGGACGGATTATGA
agctaaaggcttggggacacgagaagattttttcgcgttggtgcaataca
acatgctccatccccgGGTCCATCCCACTGATCTGAAACgttttctcgtg
tctccaccccatttttctttctaccaataaaagttaAATCTCACTTtagt
cccagggacaaaatcagcatgtcttttgggtatttccctcactttttgtc
ccacgaaacaaaaaaagaaatcataggacacacacttttttcttgtgttg
gtgggatggagcatgaaaaaaacttctcgtgtccccaagccttaagacAT
GTTCATTGCCAAGAGTTCTTATTTATGCCTGGCGAATTTCGCCGGTCAAA
GGCACGAAAAGAATTACAATTCGCCGTTCGAAAAGTTCGGTTCGCTGTct
caagtacatatttacgctaatcaatacactgcgCTTGCTAAGAATTCACC
GGCATTCTAGAAATCGCCAGAGTTAAATTTTCATCCTCCagcctaccaaa
aacaaagcaaaactcCTAAAATACAAGCGTTTTGATTGACAATGGTCAAA
CTACTAAAAAAAGCGATATTTTATATTTCACATGTGCAAAAGATGACCGA
CGGCGTTTCTTtcgggggactgggtaagcgacGGGATAAAAATCAGAATT
GCCTTGGAAGTCAAAATACTAGTAAGGGAAGAATGCAAAAAATAAACTAG
ATGTTTTCAGATGTTCCCAAAAAGTAACCAAACTAAATCTGAtggaaata
cagttgacgctctctaattcgatcttcaaggggaatttgattttcatcga
ataagggNgcttggggacacgagaagattttttcgcgttggtgcaataca
acatgctccatccccgGGTCCATCCCACTAATCTGAAACgttttctcgtg
tctccaccccatttttctttctaccaataaaagttaaatctcacttttgc
ccagggacaaaatcagcatgtcttttgggtatttccctcactttttgtcc
catgaaacaaaaaaagaaatcataggacacacacttttttcttgtgttgg
tgggatggagcatgaaaaaaacttctcgtgtctcCAAGCCTTAAGACATG
TTCATTGCCAAGAGCACAGATATCATATTCCTTTAATTAGTCAGTGATCA
GTGGTCAAGAGCTATTGTTTGCTGTTATGTCGTTTATCGTCGgtttatat
aaaataaaataccaGGGTTCTTATTTATGCCCGGCGAATTTCGCCGGTCC
AAGGCACGAAAAGAATTACAATTCGCCGTTCGAAGTTCGGTTCGCTGTct
caagtacatatttacgctaatcaatacactgcgCTTGCTAAGAATTCACC
GGCATTCTAGAAATCGCCagagttaaattttcattctccagcctaccaaa
aacaaagcaaaactcCTGAAATACAAGCGTTTTGATTTGGTCAAACTACA
AAAAAAGCGATATTTTATATTTCACACGTGCAAAATATGACCGACGGCGT
TTCTTtcgggggactgggtaagcgacGGGATAAAAATCAGAATTGCCTTG
GAAGTCAAAATACTAGTAAGGGAAGAATGCAAAAAATAAACTAGATGTTT
TCAGATGTTCCCAAAAAGTAACCAAACTAAATCTGAtggaaatacagttg
acgctctctaattcgatcttcaaggggaattagattttcatcgaataagg
gagcttatcgaataaagGAACGTCGTTTTTATATGAGTTTCTTgctgacg
gggactttaaatttcatcgaataagggagcctatcgaatggtttaacgtc
gaattagagagcgtcaactgtataagaaaaattcgaaacatttccTTTTC
CTCGCTGGCAAATGTATCCGTCATACTATAAAGTTCTTACGTATGCTTGT
CAAGGATATTCTCAATATAACAATTAATGTCGCGTGTGTTAATCAGAAAA
TGAGTGATTTGTGGAAAAGCTCTTTCCCGATTCtcctagcccggggtcca
cttaaagcttttttatagactggatggcgcgattaagtggcccggtagta
tatggtaatatgcttttgcttaggcggactgttaAACAGTCaattggctc
attatttttttctgatttttcgcacaaagatgtgtaactataaaccctcg
aatgtgacggagcccgattttcgaaagaaaaatttggggggcaaatttgg
atcaaaaaacggctaaaaacgggttttttggactttgtgaaaaatcggat
cattaattttttctgattttttgcatgaaggTTTTTGCATGAaggtaggg
taccatcataggtaaaagatggctcaagcagatttttgcgaaagaatttt
gttggctcaaaaaaacgcatgtttatctataagaatcactattaataagc
aaacgtcaatgttcttagtcaaattactcttttttgctcatgagggctta
cttttgaagaatatgtgtgtttagatgaaattttggttgcttggcgtgtt
tttatagaaaaactggccaaattcgatattttttNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNtattagcttttctcgagattggctctttcattctt
tatgattttttgcacaaagatgcataactataaaccctcgaatgtgacgg
agctcgattttcggaggtaaaaaaatttgggtaaatttcagctaaaaaac
ggctaaaagattttttgcataaaagcaggtaaaagatggctcaagcagat
ttttgttaaaaaataatttttcatctcaaaaaaacggatctttatctata
agaatcactattaataagcatacatcaatattCTTGgccaaattactaaa
ttttttaatgagatgtttttttgttcacgaagtcttgaatatgaaagaat
gtttcaagagcatgaaattttggtttctaatcgcacgatgggttattttt
tcttatttggcNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNattttcctcgtccttttggactcggaaaattaataacaaaaaaatca
ctcgtgcaattatattcgaattgcactcgttatcatgtgattacatatac
taaacgttttttttgaTAAGAAACAAACTACTAactttaatagatcgtca
ctaattgtgttctgaatgattgtttaatggtcacgctcacatcaattata
tatgtgttaaatgcataaccaggtaggtccataaaagtatcacttgtttt
catAAGAAAGCGGCCATattagagtccgcgaagccttaaaatgtttttaa
acttgttcttaacattttggccatcgaagccttatgttctgttatagttt
gtttttataaaaaaccttTACTTACTTTTTGTTTACCTTTGGTATCTGTT
TATTAACCACAGGTGATGACGAATGGCCATCCTTCCAATGTCGGAATTGC
ACTTACGGCTTCAACTTGGACTGGAACAAAACCAACTTAGAGAAAATTTT
CTATCCTACACATCATGACAAATCAAAATCTACTTGGAGCAGACCATTAG
CTAATTCAACAGTGACGAGTACGACGTCCTTGACCCTAAACCGGCCTATC
GGAGTCGGACAACATCCTATGGCACCCGGCATTCCAAGGTTAGAAAAAgt
cattttgtttttaactCGTTCCAGAATTAAGTGATCATTTTTCTGACATT
ATTGTATGCCAAATACTATGAGATcaatctttttggacctacctcggagg
tcctataaattaaccgatgtccgtccgttcgttcgttcgtctgttcgttc
gtccgtctgttaccagcttttctcaggatNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNtttccctacaacccttccctctccccccatcaacaatcaatgatga
atttattgtgttgtgtattttcgctaaacgctatattttctgactgattt
ttttccatttttcttttcgcattgctatctaactttaatcatcaggtagg
tccattcagcatattgcttgttttttttcgtgCTACATAACTAAATGTAT
TCATCCGTTTTTAGCTGCTATGTTATCTATTAGCTCTATGTCGTTGACCA
ACATAGTTTGGGGTTAGGTTCTTTTACTTTATGTGGCGCTAGCACGAAAA
AGGTCCAGGACCGAACCAAAATTATAATGAAGAGAGAAAAAAAGCTACCT
GTCAATAACGTTTTGGCAAAAGTGTCTTCTCAAAGTTTAAGATGGCAAct
cgttttctcaaaaatttctgTATTCGTTTTTCAGCGCAATGGCTTCGCAG
CAGCATGTACCACACCTTTCGACTCTACCTCGGGTCCCCTTTCCTCAACC
TTTCATACCGCCTCTCATGTGGGGTCCAATGATCCCACCACCAATGCCCT
TCCCTGGTATGATACCACATCCTCTACCGATGCAGCCTGCTCCTATGTAT
CCTATGGCCAGCGTCTCTCAACAACCAGTAAGGAGTGTGATACCTCAGGG
TGCAGTACCTGTCCCTTCGTCACAGGTATTGTTTCCATATTGTTTTgtta
cgttttttttatttaaataatcTTGAAAAATCCATTTTAAAGATTTCATC
TTGGATATAACGGATTGAATTCCTACATTAATCATCAATTTATTCATGGC
ATGGACATAATATCACATTTTAAAAAAACCTATAGAAAAGTTTCCTTGCC
AGGTTACACATATGAGAATCTAAACTTTTCATATTGTGTATTTTTAAATG
GGCAAATCCAGAAAAAAGAATTTACTCTGTGGTGAGGcgaatatttttga
aaggtcAAACCTCACTCTGGANAGAAAAAAAGCTACCTGTCAATAACGTT
TTGGCAAAAGTGTCTTCTCAAAGTTTAAGATGGCAActcgttttctcaaa
aatttctgTATTCGTTTTTCAGCGCAATGGCTTCGCAGCAGCATGTACCA
CACCTTTCGACTCTACCTCGGGTCCCCTTTCCTCAACCTTTCATACCGCC
TCTCATGTGGGGTCCAATGATCCCACCACCAATGCCCTTCCCTGGTATGA
TACCACATCCTCTACCGATGCAGCCTGCTCCTATGTATCCGATGGGCAGC
GTCTCTCAACAACCAGTAAGGAGTGTGATACCTCAGGGTGCAGTACCTGT
CCCTTCGTCACAGGTATTTTTTCCATATTGTTTTGTTACttacgtttttt
tatttaaataaccTTGAAAAATCCATTTTAAAGATTTCATCTTGGATATA
ACGGATTGAATTCCCACATTAATCATCAATTTATTCATGGCATGGACATA
ATATCACATTTTAAAAAAACCTATAGAAAAGTTTCCTTACCAGGTTACAC
ATATGAGAATCTAAACTTTTCATATTGTGCATTTTTAAATGGGCAAATCC
AGAAAAAAGAATTTACTCTGTGGTGAGGcgaatatttttgaaaggtcAAA
CCTCACTCTGGATTATTTTTTGCCGGAGAATTAGAGTCCCTCCTGTTTTT
TTGGACGCTTTGGTTTTTCACGAAATTTCACTGACCCTGATCTTCCAGAT
TCTTGAGTGCACCCCTTTACGGAAAATAATGAGCTCCTCAACATGGGaga
agattttcatttttgaatagTCCAATGTGATTCGTATATCTGCTTTCTCT
TAGGTGCCGATCACAGTCGCCTCCCAACTTCTTGCAGCCGCGCAAAAGGC
TAAAGAGAGTCAACCAGCGCCAACACCTCAGCAGCCCCTTTCACAGGTTA
GATTTCCACATTTGTAAGGtcttcttttaaagaaaatatgacAGAGACAG
TAATTAGAGTAGGTGAATTCTTTATTGTAACGTCGGAAAAGCCCTTGGTT
TAAGCAAAGTTAAAACAAGACAAAACTGaatccgaaaattgattttgcta
TGGATCAGTGTGGAGTCAGATCATAAACaacaacaagacgacttaaagtc
gaaaatttcgcacaatacttgaacatcaacgacgaagacgcgtgaaacgt
gactcctgcagactccttacacaaaatatacacaatgtattgtacacaca
ggtcatagatgtcatagataccctgtttttttttatgaaaaatctcaatc
cgttaaaaaaaagattccttaaaaaatgcgactaaagaattctattctat
aaagcgtaaacaaaatctttcaattcagaataattcagagaactgcaata
tacttgagaaaaataatttaaattttttttgaaaacgaagaagaaaaaat
gaacttttcattctttgatgccagaaacctcattttgtgctttgaaggaa
cttgtgataaagacccctttcacttgcgcaaagtttatatcaacttcctt
ataaacagtagaatttatctaaaattgagaaaaatggctagtcagaaaaa
tctgttgtatactatcttcgccatcttcgtcatcgaaaaataaaaatttg
ccaaaattcaaaaaattttggttttttggaaagaataccttccagtcaac
aaaaaatattattacgaaaaagtctgaaaatcctttttaagaagtctatg
agcaaaaattgatatttttaaattttgcctgtaatgtGCTTGGGCACGCT
TGGGCAAGCTCCAACCTTCGAcaggcaaaaaatgaaattgtcaattttga
ccaatagactttttttaacgaattttcaaacgttttcgtaataatatttt
atgttcactggagggtcttcttttcaaaaaaacaaaaatttttgaatttt
ggcaaattttgatttttcgatgacgtcatcattttatgacgtcattttgc
cttgtTTCCTTTATATCTCctaatatattcattttcagatataggttgtg
acctttttcttcatcagtttttcTACTAAtggttcaaaatgaaaatccta
attagcaaaaggtgtatcaagatcggtgaagtttgattagtttgatttat
taccttgttgcccattccTTTTACATTCCGACAGCTTATTAGCAGACGTC
CATGCTAAAGCTTAAAGTGCgtgccaatatctatcatcccatcggggagg
aaaagctggaacttttactaaccaaactcatcgaacaccaatcaaacttc
attagataaaaaaatgtcatcattaacgagggaccgctgtacattgtgcg
gtggtgtacggttgggctggatctaaatgtcctttgtacgacggtgaaaa
taggttaatttggAATCTGCTGTATTATCTGTACACCCCACCTTTCCCAC
CGCAAATCACCGTACAATGACAATGTACGACAGTGTCTAGGCAGGGTCGT
TTTGATTATacaaaatgattgctgaatttcaattgacatgatttctaaga
aataccgtgagatcgggtaacttgcatgcataagccctcaaatgaatgac
ccatttggtcattaaaatacaaagttaaatcaaaacaaaaatggtaggct
agagctgcaagcagagctgcgtagttcatttgttttgaaattttgctgct
ttgattggtcagtcatttgatggctgtgcaagttaccctctactgatgca
agttacccgacttcacggtacttgctaaaactgactgtttgtcacaactg
gtttcactattaacacataactatctggtgaaaaaaggaaaaaatattat
acctgtgctgtttgtagttttggtgaagaagagaagaaagggttaataat
gttgttgtttgttgtggaaaattaactctttttgtactacttactgagca
tgatcaatttattggtgcattcactaactacacaaacaaaaaatacttag
tagtaaacaaatattaaacctctttaaacactctacaaaagaccagaaaa
tatgataaaaatttgtacagcagcagcaagtttcaaaagcatgtctgatg
tgcaatcaagcagtcattaaaaagttctcacgatgaatgtttacaaaggc
ttggttacacttcttgcactagcgtattttatttattgagaaaagccctg
ttttttatcactttttatctttgtgagtgagtccacctttagaatatttg
ccgtagtacgcccgcagccatacgcccacgccataatttgcgccccaaaa
aatgTCTCGCCAGACACGCGGAAGgctattgtaatactttcgctaagcga
aattNTATGTATCCGATGGGCAGCGTCTCTCAACAACCAGTAAGGAGTGT
GATACCTCAGGGTGCAGTACCTGTCCCTTCGTCACAGGTATTTTTTCCAT
ATTGTTTTGTTACttacgtttttttatttaaataaccTTGAAAAATCCAT
TTTAAAGATTTCATCTTGGATATAACGGATTGAATTCCCACATTAATCAT
CAATTTATTCATGGCATGGACATAATATCACATTTTAAAAAAACCTATAG
AAAAGTTTCCTTACCAGGTTACACATATGAGAATCTAAACTTTTCATATT
GTGCATTTTTAAATGGGCAAATCCAGAAAAAAGAATTTACTCTGTGGTGA
GGcgaatatttttgaaaggtcAAACCTCACTCTGGATTATTTTTTGCCGG
AGAATTAGAGTCCCTCCTGTTTTTTTGGACGCTTTGGTTTTTCACGAAAT
TTCACTGACCCTGATCTTCCAGATTCTTGAGTGCACCCCTTTACGGAAAA
TAATGAGCTCCTCAACATGGGagaagattttcatttttgaatagTCCAAT
GTGATTCGTATATCTGCTTTCTCTTAGGTGCCGATCACAGTCGCCTCCCA
ACTTCTTGCAGCCGCGCAAAAGGCTAAAGAGAGTCAACCAGCGCCAACAC
CTCAGCAGCCCCTTTCACAGGTTAGATTTCCACATTTGTAAGGtcttctt
ttaaagaaaatatgacAGAGACAGTAATTAGAGTAGGTGAATTCTTTATT
GTAACGTCGGAAAAGCCCTTGGTTTAAGCAAAGTTAAAACAAGACAAAAC
TGaatccgaaaattgattttgctaTGGATCAGTGTGGAGTCAGATCATAA
ACAacaataatttcatttttttgaaaaactaatatTTCGCCTCACAACAA
AAGCATCGTTAGAGTGATAGTAATACTGttaattttaatcaaaaatcaac
TAGCGGGACAAATTCAAGTCTCTAGAGGCTTTCATTTTAATATCTCTGCC
ATCTTAAAAAGTCCAaacacataaactcgctatttaaCTGACCCTGTTCG
CACTAAGTTCTTGTATTATTTTCGAAAAGTACTGGGCGGTGTTTTAAAAG
CTGTGTAgtaatctaaagaaaaaaacaagcaaTCAAAATTACCACGATTA
CCTCATTTTACTTTATAGCCTACCAACGTTGCTAGTGCTAACATTTCGGA
AGACGAAAAAATCAAAGCAGTTATGGCGCAACAGGCAACTGTTTCCGGAA
TCGACCCTGCACAGTAAGACAATGCTCACACGTCTCTGTTTGTCAGGTGG
CTCCTTAACGAAATACATATGGAGCCTCCGTAACATGAACCTTTTTTACT
CTAATGTCCCCTTAACTCGAAAGAATTTGCTGGTCccttctataactcga
acaaatttgtgttcccgtACGTTTTCGAGTTATAAAAACTCGACTGTACA
TATATTTTGTATTAAACATGAAAAACCCTTGCTGAACTTTTGATGGGTCT
GAAAGAAGGATAGCTTCATGTGGAGCTTTTTCAAATAACACTGGATTGAC
CTCTGATCGTATCTGGGGCAAAAACCAACCTTGATAAAAATTACTTTGAA
AACAAGATTCTTGTAGGCTCAAACATCTGGGAAGGAACAGAATATATTTG
ACAAATTCCCGTTTTAGGTATGAGAAAGCGAAAGTCCCTCATCCCATGTA
TGTTTGCTACCGATGTGGAGGGAAAGGACATTTTGTTCGACAGTGCCCAA
CTCACgaggtaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014344XLOC_014344Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025549-exon-sc0000539-1491911889:124284..124627TCONS_00025549-exon-sc0000539-1491911889:124284..124627Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:124284..124627TCONS_00025549-exon-sc0000539-1510915933:124284..124627Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:124284..124627TCONS_00025549-exon-sc0000539-1575043694:124284..124627Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1491911889:125303..125398TCONS_00025549-exon-sc0000539-1491911889:125303..125398Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:125303..125398TCONS_00025549-exon-sc0000539-1510915933:125303..125398Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:125303..125398TCONS_00025549-exon-sc0000539-1575043694:125303..125398Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1491911889:125869..126053TCONS_00025549-exon-sc0000539-1491911889:125869..126053Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:125869..126053TCONS_00025549-exon-sc0000539-1510915933:125869..126053Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:125869..126053TCONS_00025549-exon-sc0000539-1575043694:125869..126053Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1491911889:126454..126573TCONS_00025549-exon-sc0000539-1491911889:126454..126573Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:126454..126573TCONS_00025549-exon-sc0000539-1510915933:126454..126573Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:126454..126573TCONS_00025549-exon-sc0000539-1575043694:126454..126573Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1491911889:128680..128889TCONS_00025549-exon-sc0000539-1491911889:128680..128889Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:128680..128889TCONS_00025549-exon-sc0000539-1510915933:128680..128889Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:128680..128889TCONS_00025549-exon-sc0000539-1575043694:128680..128889Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1491911889:130222..130496TCONS_00025549-exon-sc0000539-1491911889:130222..130496Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:130222..130496TCONS_00025549-exon-sc0000539-1510915933:130222..130496Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:130222..130496TCONS_00025549-exon-sc0000539-1575043694:130222..130496Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1491911889:131576..131741TCONS_00025549-exon-sc0000539-1491911889:131576..131741Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:131576..131741TCONS_00025549-exon-sc0000539-1510915933:131576..131741Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:131576..131741TCONS_00025549-exon-sc0000539-1575043694:131576..131741Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1491911889:135646..135871TCONS_00025549-exon-sc0000539-1491911889:135646..135871Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:135646..135871TCONS_00025549-exon-sc0000539-1510915933:135646..135871Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:135646..135871TCONS_00025549-exon-sc0000539-1575043694:135646..135871Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1491911889:136968..137208TCONS_00025549-exon-sc0000539-1491911889:136968..137208Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:136968..137208TCONS_00025549-exon-sc0000539-1510915933:136968..137208Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:136968..137208TCONS_00025549-exon-sc0000539-1575043694:136968..137208Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1491911889:138337..138429TCONS_00025549-exon-sc0000539-1491911889:138337..138429Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:138337..138429TCONS_00025549-exon-sc0000539-1510915933:138337..138429Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:138337..138429TCONS_00025549-exon-sc0000539-1575043694:138337..138429Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1491911889:142002..142096TCONS_00025549-exon-sc0000539-1491911889:142002..142096Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:142002..142096TCONS_00025549-exon-sc0000539-1510915933:142002..142096Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:142002..142096TCONS_00025549-exon-sc0000539-1575043694:142002..142096Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1491911889:142501..142596TCONS_00025549-exon-sc0000539-1491911889:142501..142596Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1510915933:142501..142596TCONS_00025549-exon-sc0000539-1510915933:142501..142596Clytia hemisphaericaexon
TCONS_00025549-exon-sc0000539-1575043694:142501..142596TCONS_00025549-exon-sc0000539-1575043694:142501..142596Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000539supercontigsc0000539:124284..142596 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.243059	0	0	0.328609	0.45089	0.686818	3.08414	0.68155	0.00137548	2.8833	0.000131153	0.190275	0.192354	0.22958	0.444561	0.418681	0.0185323	0.644638	0.421701	2.14025e-08	0	2.28717e-05	0	0.525756	1.69021	0.220877	0.120951	0	3.09128e-06
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025549 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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