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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025577 ID=TCONS_00025577|Name=TCONS_00025577|organism=Clytia hemisphaerica|type=transcript|length=917bp
ATTTAAACAATACTCTtctacacCGAAAAGTTAATGTCTACATTTGTGAT
TACCAGGGGCGGGAATAATGAGGGCAATACACCCTGCGTGAGCTAACGCC
CTATGAGTTCTCGGTGTATTATTGTAAACTCTGAAAGGAATACCTCTGAa
acaaaatgaaacttttttcgGTTTTCGATTTGTCTTTTTACGTTGTGAGT
CCAGTatatgtttttgttgttgtccTGGTATAAAATTTTTGGGTACCGTT
GTTTTAAAACTTAACTGatgaatttgtttgttttggtgtttctgTGCTAC
TGAGATGGAACTAACGGTAGAGATGGAGTGAGTTGAACCGTGTGCCGAAT
CTGTTGAACAGGATGATTCGCTACCACTATCGTTCATATATAAGTCTTCG
TGAACCGAAACTCGTTTATAGTCGTTATTACTCGGTTTTCGTTTATTATT
AAAACTTTCACGTAAATTTTTATCAATCAGTTCGATTTCTTTTGGATGTT
GGGGTAACACTCGAGGCGTGTAATTTGCAGAACGAGTTTTCTTTCCGACG
TTATTTTTATTGACGTCATATTTATTAGAGTCTTGTTTATCGTTTCGCGA
TTTTCGGTATTCGTCCCGAACTTTAAGTCGGTGCGTTCTCGGTGAATCTT
CCAAATCAGCGATCATATTATCGGGAGGGTTCGGTCGTTTTATGTATCTC
GGTTCACTTTTACGTCCGCCATTATTGTTATCATTTTTATTAGTTTCCAT
AGGGATATCGTTACTGTAGTTACTATTATAAGACGAGCCTAATCTACCGT
CTGACATATCCGAACGAATTCCCTCGTCCTCCTCAAAAATTTCCGGGGGT
TCTGTATGTTCGAGTTTCATCAAATATTCTTGGACACGTTGATGACTTTT
GACTTCCTCTACTTCTA Run BLAST on NCBI transcript from alignment at sc0000539:86880..88062- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025577 ID=TCONS_00025577|Name=TCONS_00025577|organism=Clytia hemisphaerica|type=transcript|length=1183bp|location=Sequence derived from alignment at sc0000539:86880..88062- (Clytia hemisphaerica)
ATTTAAACAATACTCTTCTACACGTCTTTTTTTTTTTAAGAAACACACTT
TTAAGAAACATGAGGCTCAGAATGCCTAAAAACTAAGAAATATCTAAGAA
ACATGCTGAGGCTGAGAATGAGAAAATAACATTTTTTAATTCGTTTTTTT
ATAAGAACCTTCCAAGGCTAATTATGTCAAAAAGTTTAGAAACATGTAAG
AAACATTTAAAGCTCAAAAGGCCGATTTCTTAAGAAACATTGAGGCTGCT
TGGTAAAACTAGTTTCTTTAAAAAAAAAGACGTGTATAGCGAAAAGTTAA
TGTCTACATTTGTGATTACCAGGGGCGGGAATAATGAGGGCAATACACCC
TGCGTGAGCTAACGCCCTATGAGTTCTCGGTGTATTATTGTAAACTCTGA
AAGGAATACCTCTGAAACAAAATGAAACTTTTTTCGGTTTTCGATTTGTC
TTTTTACGTTGTGAGTCCAGTATATGTTTTTGTTGTTGTCCTGGTATAAA
ATTTTTGGGTACCGTTGTTTTAAAACTTAACTGATGAATTTGTTTGTTTT
GGTGTTTCTGTGCTACTGAGATGGAACTAACGGTAGAGATGGAGTGAGTT
GAACCGTGTGCCGAATCTGTTGAACAGGATGATTCGCTACCACTATCGTT
CATATATAAGTCTTCGTGAACCGAAACTCGTTTATAGTCGTTATTACTCG
GTTTTCGTTTATTATTAAAACTTTCACGTAAATTTTTATCAATCAGTTCG
ATTTCTTTTGGATGTTGGGGTAACACTCGAGGCGTGTAATTTGCAGAACG
AGTTTTCTTTCCGACGTTATTTTTATTGACGTCATATTTATTAGAGTCTT
GTTTATCGTTTCGCGATTTTCGGTATTCGTCCCGAACTTTAAGTCGGTGC
GTTCTCGGTGAATCTTCCAAATCAGCGATCATATTATCGGGAGGGTTCGG
TCGTTTTATGTATCTCGGTTCACTTTTACGTCCGCCATTATTGTTATCAT
TTTTATTAGTTTCCATAGGGATATCGTTACTGTAGTTACTATTATAAGAC
GAGCCTAATCTACCGTCTGACATATCCGAACGAATTCCCTCGTCCTCCTC
AAAAATTTCCGGGGGTTCTGTATGTTCGAGTTTCATCAAATATTCTTGGA
CACGTTGATGACTTTTGACTTCCTCTACTTCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025577-exon-sc0000539-1575043694:88040..88062 | TCONS_00025577-exon-sc0000539-1575043694:88040..88062 | Clytia hemisphaerica | exon |
| TCONS_00025577-exon-sc0000539-1575043694:86880..87773 | TCONS_00025577-exon-sc0000539-1575043694:86880..87773 | Clytia hemisphaerica | exon |
| TCONS_00025577-exon-sc0000539-1510915933:88040..88062 | TCONS_00025577-exon-sc0000539-1510915933:88040..88062 | Clytia hemisphaerica | exon |
| TCONS_00025577-exon-sc0000539-1510915933:86880..87773 | TCONS_00025577-exon-sc0000539-1510915933:86880..87773 | Clytia hemisphaerica | exon |
| TCONS_00025577-exon-sc0000539-1491911889:88040..88062 | TCONS_00025577-exon-sc0000539-1491911889:88040..88062 | Clytia hemisphaerica | exon |
| TCONS_00025577-exon-sc0000539-1491911889:86880..87773 | TCONS_00025577-exon-sc0000539-1491911889:86880..87773 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000539 | supercontig | sc0000539:86880..88062 - |
Blast
The following BLAST results are available for this feature:
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