TCONS_00025601 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025601
Unique NameTCONS_00025601
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2225

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025601 ID=TCONS_00025601|Name=TCONS_00025601|organism=Clytia hemisphaerica|type=transcript|length=2225bp
TTTCTATTCAACCTTTTGTTACTATCATGTTTcaaccatttttatttttc
tagccTTTTTACTAAATAAGATCTCAAAGTAAAAATAGGCTTTAACATCA
AGCCACACATGCAACCATCTTAACACTCAAGAGACATGCGAAGTAGAGAT
GATTATTTGATATGCTTTGGTGCTTTTCTTGTACAATGTGGAGTTTTTGG
AATACACAAcaattttggtttgtttttcgaCAGTTTATATAAAGGTTATA
ACGttgaaatatctcaaatagcaTGGATCGGCTCTTGTGGAATGGGTACA
ACTTTCTTAGTCAGCCCTTTAGCACACATCATTTATAACCGATTCGGATT
CAATCGGCTACTTGGACTCTCAATCGTATTATGTCTTGTTGGTTGGCTTT
CATCATCCTTCGTTGAGAATGTCCANTGTATTATGCCTTGTTGGTTGGCT
TTCATCATCCTTCGTTGAAAATGTCCAATTTTTGATATTCACATACAGTG
TTTTGTGGGGGACTGGAGCTGGTTTTGCAAATTACGCGGGAACATTGATT
ATCAACCAATCATTTTACGGCGAGCAACTTTCATTCGCTAATGGTCTCGC
ATCGAGTGGAACCGGATTTGGAGCTTTGATTTTAGGTCAATTACTAACTT
GGATGCTACGTGAATTTGGATACAGGTGGACTTTCCGCGCCTGCGCATTA
GTCCCTTTATTTTATGTGTTCTTATTTTATTCTCACAAACTTAGACGAAA
ACAAAATGATGTAGAACCTTTTCATGGAAAATTTAACGAAACTTCAGAAG
ATGGAGCgctagaaaatcaaaaattaaaaagcgaCGATAACAACAATAAC
TTAGACAACGAGACGCCAAAACCATCGAAACCGACAAAAGCATTTAACTT
GAGCGAACTTATTGATAAAGAGCTGTGGCGCAACATGAAATTCATTATTT
ATCTTGCTGGTGTGTCTGTCTACTTGTTTGGAGCATTCAttccttttgtt
tttctgATTTCACACGCGATGGAGAACAACATCACCAAAGAAAATGCTCA
GTTTCTCATCTCCATTCTCTCCATTGTATCCACAATCACCAAAATATTCA
GTGGAGTCTTCTTAACAATGCAAAACGTCATCGATAGATTCTCGCTACTC
CTTGCTGCAATGTTCATAGCTGCTCTATCTAACATTATTGCAGCTAGGGG
CACCACTTACTGGCATTTCTGCATTTTTTCCATCATTGCTGGACTATGTG
AAGGATGTTTTGTTGGACAACTACCAGCAGTGGCTGTTGGCTTATTACCA
TCGAAAGATAAAGTTGCTGCTGCGATTGGGATAATGTTTTCGGTGATTTC
AATTCCACTTATGTTGGGCCCTTTGATTGCAGGCTACATGGTAAAAGGTG
ACTCCTTCGTTGCACCGTTCTATATCGCAACATCCGTGAGTTTCGTTGGT
GCTCTTCTTGGTGCCATCTCAAAATTTCTTGATGCTAATGATAAATCGCA
CATGGAAGACGAAGAAGAACAGGTCAAAATGACCTGCAATGGAGAACATT
CATTACCTTTACATTACATTTAGATCAAGACGATTTGACAAAAACCTTAC
CGTTGGTCGTTACAACTGTTTGAGAAATTACTTTTCAGATTTACAACTGA
TAacttttgtaacatttttacgaatgaaaaaaagagaaacattaTAACCT
TTGCTGGCgagggaaaattttcaaaatctgttatgttttctttcattcat
gaatttaaaagaaattcttGAGAATTCTCCCCGTGCATACACGAAAACAT
CAAATGTTGGTTGTAATCTATATCTCAAAGGTTTATCCCATCAAATAGTT
ATATATCTTCCTGCGTCACTCGgttcataaaaaataattttcaattttgg
aaatccaaaataGTTTTCATCAATTCGTCTCGAAGACTATTTGATTAATT
CATGGTAGGCAGGTAGTCAGGATCTTCAACTCCATAGATAAATGAAAATT
CTGGCTCTGGCTGGCTGCTAATTTTCTTGAGATACATATTTACTCGGGTT
CGAACATCACAAAAACACCAATATTCCCCCGCAATCTCGCATCCAGAACC
ACTTGCATCACCTTTTTATTTCATTGATGGAAGTTGGTGCAAAAATTGTC
GACAATATAAATCAAACAACCAAAAAATCTTCGGTTTTTCCACAGCTATT
TCCCAGGCCTTTCTTGAGCGTTATC
Run BLAST on NCBI

protein sequence of TCONS_00025601-protein

>TCONS_00025601-protein ID=TCONS_00025601-protein|Name=TCONS_00025601-protein|organism=Clytia hemisphaerica|type=polypeptide|length=384bp
MSXVLCLVGWLSSSFVENVQFLIFTYSVLWGTGAGFANYAGTLIINQSFY
GEQLSFANGLASSGTGFGALILGQLLTWMLREFGYRWTFRACALVPLFYV
FLFYSHKLRRKQNDVEPFHGKFNETSEDGALENQKLKSDDNNNNLDNETP
KPSKPTKAFNLSELIDKELWRNMKFIIYLAGVSVYLFGAFIPFVFLISHA
MENNITKENAQFLISILSIVSTITKIFSGVFLTMQNVIDRFSLLLAAMFI
AALSNIIAARGTTYWHFCIFSIIAGLCEGCFVGQLPAVAVGLLPSKDKVA
AAIGIMFSVISIPLMLGPLIAGYMVKGDSFVAPFYIATSVSFVGALLGAI
SKFLDANDKSHMEDEEEQVKMTCNGEHSLPLHYI
Run BLAST on NCBI

transcript from alignment at sc0000540:80261..84881-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025601 ID=TCONS_00025601|Name=TCONS_00025601|organism=Clytia hemisphaerica|type=transcript|length=4621bp|location=Sequence derived from alignment at sc0000540:80261..84881- (Clytia hemisphaerica)
TTTCTATTCAACCTTTTGTTACTATCATGTTTCAACCATTTTTATTTTTC
TAGCCTTTTTACTAAATAAGATCTCAAAGTAAAAATAGGCTTTAACATCA
AGCCACACATGCAACCATCTTAACACTCAAGAGACATGCGAAGTAGAGAT
GATTATTTGATATGCTTTGGTGCTTTTCTTGTACAATGTGGAGTTTTTGG
AATACACAACAATTTTGGTTTGTTTTTCGACAGTTTATATAAAGGTTATA
ACGTTGAAATATCTCAAATAGGTAAGTCTTTTTAATTACACTTAGTATTT
CATGACTTGGAAATCCTTCACAAAAATTTTATTTGTGAACTATCTATATT
TCTATTATTTGACGTCAGATTAAATTTTTGTTTATCCATTCAAGTTGCCT
AGTATTTTATAGTTATCATAGCTACACCCCAGAGGCAGGGGAGGCACACG
ATTTTAAAACGACAAATACCGTAAAATTTCAGCCTGCTTGGAAAATTTTA
TGACCCGAGAACAATAGAGTTTCTATCACCATTGATATTTTGAGAGAAAT
TTTCATCCTCGCGTGGGAATAAGGGGCTGTGAGACAGGGGTGTTTTACTG
TACTACTGTACTGTACTACGATTTTGATTTTTCTCTTCAAAATTTTCAGC
ATGGATCGGCTCTTGTGGAATGGGTACAACTTTCTTAGTCAGCCCTTTAG
CACACATCATTTATAACCGATTCGGATTCAATCGGCTACTTGGACTCTCA
ATCGTATTATGTCTTGTTGGTTGGCTTTCATCATCCTTCGTTGAGAATGT
CCANTGTATTATGCCTTGTTGGTTGGCTTTCATCATCCTTCGTTGAAAAT
GTCCAATTTTTGATATTCACATACAGTGTTTTGTGGGGGACTGGAGCTGG
TTTTGCAAATTACGCGGGAACATTGATTATCAACCAATCATTTTACGGCG
AGCAACTTTCATTCGCTAATGGTCTCGCATCGAGTGGAACCGGATTTGGA
GCTTTGATTTTAGGTCAATTACTAACTTGGATGCTACGTGAATTTGGATA
CAGGTGGACTTTCCGCGCCTGCGCATTAGTCCCTTTATTTTATGTGTTCT
TATTTTATTCTCACAAACTTAGACGAAAACAAAATGATGTAGAACCTTTT
CATGGAAAATTTAACGAAACTTCAGAAGATGGAGCGCTAGAAAATCAAAA
ATTAAAAAGCGACGATAACAACAATAACTTAGACAACGAGACGCCAAAAC
CATCGAAACCGACAAAAGCATTTAACTTGAGCGAACTTATTGATAAAGAG
CTGTGGCGCAACATGAAATTCATTATTTATCTTGCTGGTGTGTCTGTCTA
CTTGTTTGGAGCATTCATTCCTTTTGTTTTTCTGGTGAGTCTGAGTTCGA
ATAATTTCGTGCATTTTACTTCAAAACAAAATATTAGCTATAGAAAATAT
TCGGGCTAGTTACTTATAAGTTAATTGGTCCAGCGCGCAGCAGAATGAAC
CTTTAAAAAGCAACTGATCGAAAAGATTTTGTCTTTGTCGGGGCCTGTGC
GCGCAATAAATTAACAAGTCCAGGCTAANNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTATGTTTTGGATTGAATTGGTAGTAGA
GTCAAATTTCCCGGTTAGATTAAAGGGTTGTTTCAGGTAGGGTCAGGTAG
GGTTAGGGCTAGGGTTGGGGATGGGTTTTAACCCCTGGTTAGGGTTTTAG
CCCCCGGGTAGAGTTTGAAGTAAAAACTCTTAGGTTCAAATCAGGCTATT
TAGAGCAAAATAAGGGGCCTTCTCTTTGACAGCTGAAAATATTCTTAGAG
ATTAATAAACGGGGGGGGGTCCTAATAAGGTCCGGGNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTTATATGTGCTTTGTATTTGTATATA
GTGGGTTCGAATCCCATCAGCGGCAAAAGTTTCGAAATATCGGGAAATGC
ATCAAAAACTTTCAAAACTTAGCAAAAAGAAAGTGTCAAAGAATAGAAGC
TCAGAGTGGAGGATGGGAAGGAAATTTTTTTGCGTCACTTAAGGAACTCG
GTACGAACTACATTGGGTTATTGCCACGTCAGCTGGACCTTCACGCCGCT
CCGGCATCTTGTTTTTTATTGGATACGCCTAGATAGGATTTTTTTTTTCT
TTGATGTTACATAATATTTTCCCTCTTTTNAACTTACTTTACTTACGTAC
TCTTGATTTTGGTCATCTGAGGTAACAAAACCTTATATTCAACCTATCAT
ATTCACCAAGGTTAATTTCTACTAAACTTACTCCATATCATCTGTTAACT
ATTGAAATAAATCAAACTGATAGAGTTTGGTTCTTAATAAAAAATATTTT
ATAACCTTTCAGATTTCACACGCGATGGAGAACAACATCACCAAAGAAAA
TGCTCAGTTTCTCATCTCCATTCTCTCCATTGTATCCACAATCACCAAAA
TATTCAGTGGAGTCTTCTTAACAATGCAAAACGTCATCGATAGATTCTCG
CTACTCCTTGCTGCAATGTTCATAGCTGCTCTATCTAACATTATTGCAGC
TAGGGGCACCACTTACTGGCATTTCTGCATTTTTTCCATCATTGCTGGAC
TATGTGAAGGATGTTTTGTTGGACAACTACCAGCAGTGGCTGTTGGCTTA
TTACCATCGAAAGATAAAGTTGCTGCTGCGATTGGGATAATGTTTTCGGT
GATTTCAATTCCACTTATGTTGGGCCCTTTGATTGCAGGTCAGTATTATC
AGAAAACACTTTGAAAGCAAAAATTTGAACCCTGTCTCTTGTTGAAATAC
GGGCTTTTCGGATGTTTCTGATTTGGATCAATATCAATGTAAAGAAGTTT
TTCGTGTCTCTTAATTTACGTAATTTCTGCTATTATGAAAGAAAACATTC
GAATCTGTAGAGGCAATCCTTTACGCAAATCGAACTTTTGCTTCTATATA
ATGGACGGGTCTACTTAACTTAACAAAACACGAATAAAACCTCTATATGT
ATACCAATAATAATAGACCTGAACCTACCTTGACTTACCATAGGGTGTTA
GATATATTTACTTTACTACTCACACGTATCGTGTTCTAATGGGTTCCCGG
GGGGGCGCACTGACCTTGACAGTCGACAGGACGTTAAATCCTGTCAGATA
TGAATGTATGATGAATTAGGGACCTTGTCAGAACAAAAACCCTGTCAGAT
GCCATCAGAGTCTTAAAAAGGGACCCAAACCAGCGGAACATCCCCGTACT
CAAATCTGTCTAAGTGACCCCCAAATAGATTTCCTTTTCTAGTTCACCAC
GTTAACTTTGCATCTGTTCATCTTATAGGCTACATGGTAAAAGGTGACTC
CTTCGTTGCACCGTTCTATATCGCAACATCCGTGAGTTTCGTTGGTGCTC
TTCTTGGTGCCATCTCAAAATTTCTTGATGCTAATGATAAATCGCACATG
GAAGACGAAGAAGAACAGGTCAAAATGACCTGCAATGGAGAACATTCATT
ACCTTTACATTACATTTAGATCAAGACGATTTGACAAAAACCTTACCGTT
GGTCGTTACAACTGTTTGAGAAATTACTTTTCAGATTTACAACTGATAAC
TTTTGTAACATTTTTACGAATGAAAAAAAGAGAAACATTATAACCTTTGC
TGGCGAGGGAAAATTTTCAAAATCTGTTATGTTTTCTTTCATTCATGAAT
TTAAAAGAAATTCTTGAGAATTCTCCCCGTGCATACACGAAAACATCAAA
TGTTGGTTGTAATCTATATCTCAAAGGTTTATCCCATCAAATAGTTATAT
ATCTTCCTGCGTCACTCGGTTCATAAAAAATAATTTTCAATTTTGGAAAT
CCAAAATAGTTTTCATCAATTCGTCTCGAAGACTATTTGATTAATTCATG
GTAGGCAGGTAGTCAGGATCTTCAACTCCATAGATAAATGAAAATTCTGG
CTCTGGCTGGCTGCTAATTTTCTTGAGATACATATTTACTCGGGTTCGAA
CATCACAAAAACACCAATATTCCCCCGCAATCTCGCATCCAGAACCACTT
GCATCACCTTTTTATTTCATTGATGGAAGTTGGTGCAAAAATTGTCGACA
ATATAAATCAAACAACCAAAAAATCTTCGGTTTTTCCACAGCTATTTCCC
AGGCCTTTCTTGAGCGTTATC

Coding sequence (CDS) from alignment at sc0000540:80261..84881-

>TCONS_00025601 ID=TCONS_00025601|Name=TCONS_00025601|organism=Clytia hemisphaerica|type=CDS|length=3465bp|location=Sequence derived from alignment at sc0000540:80261..84881- (Clytia hemisphaerica)
GCTACATGGTAAAAGGTGACTCCTTCGTTGCACCGTTCTATATCGCAACA
TCCGTGAGTTTCGTTGGTGCTCTTCTTGGTGCCATCTCAAAATTTCTTGA
TGCTAATGATAAATCGCACATGGAAGACGAAGAAGAACAGGTCAAAATGA
CCTGCAATGGAGAACATTCATTACCTTTACATTACATTTAGATTTCACAC
GCGATGGAGAACAACATCACCAAAGAAAATGCTCAGTTTCTCATCTCCAT
TCTCTCCATTGTATCCACAATCACCAAAATATTCAGTGGAGTCTTCTTAA
CAATGCAAAACGTCATCGATAGATTCTCGCTACTCCTTGCTGCAATGTTC
ATAGCTGCTCTATCTAACATTATTGCAGCTAGGGGCACCACTTACTGGCA
TTTCTGCATTTTTTCCATCATTGCTGGACTATGTGAAGGATGTTTTGTTG
GACAACTACCAGCAGTGGCTGTTGGCTTATTACCATCGAAAGATAAAGTT
GCTGCTGCGATTGGGATAATGTTTTCGGTGATTTCAATTCCACTTATGTT
GGGCCCTTTGATTGCAGATGTCCANTGTATTATGCCTTGTTGGTTGGCTT
TCATCATCCTTCGTTGAAAATGTCCAATTTTTGATATTCACATACAGTGT
TTTGTGGGGGACTGGAGCTGGTTTTGCAAATTACGCGGGAACATTGATTA
TCAACCAATCATTTTACGGCGAGCAACTTTCATTCGCTAATGGTCTCGCA
TCGAGTGGAACCGGATTTGGAGCTTTGATTTTAGGTCAATTACTAACTTG
GATGCTACGTGAATTTGGATACAGGTGGACTTTCCGCGCCTGCGCATTAG
TCCCTTTATTTTATGTGTTCTTATTTTATTCTCACAAACTTAGACGAAAA
CAAAATGATGTAGAACCTTTTCATGGAAAATTTAACGAAACTTCAGAAGA
TGGAGCGCTAGAAAATCAAAAATTAAAAAGCGACGATAACAACAATAACT
TAGACAACGAGACGCCAAAACCATCGAAACCGACAAAAGCATTTAACTTG
AGCGAACTTATTGATAAAGAGCTGTGGCGCAACATGAAATTCATTATTTA
TCTTGCTGGTGTGTCTGTCTACTTGTTTGGAGCATTCATTCCTTTTGTTT
TTCTGGCTACATGGTAAAAGGTGACTCCTTCGTTGCACCGTTCTATATCG
CAACATCCGTGAGTTTCGTTGGTGCTCTTCTTGGTGCCATCTCAAAATTT
CTTGATGCTAATGATAAATCGCACATGGAAGACGAAGAAGAACAGGTCAA
AATGACCTGCAATGGAGAACATTCATTACCTTTACATTACATTTAGATTT
CACACGCGATGGAGAACAACATCACCAAAGAAAATGCTCAGTTTCTCATC
TCCATTCTCTCCATTGTATCCACAATCACCAAAATATTCAGTGGAGTCTT
CTTAACAATGCAAAACGTCATCGATAGATTCTCGCTACTCCTTGCTGCAA
TGTTCATAGCTGCTCTATCTAACATTATTGCAGCTAGGGGCACCACTTAC
TGGCATTTCTGCATTTTTTCCATCATTGCTGGACTATGTGAAGGATGTTT
TGTTGGACAACTACCAGCAGTGGCTGTTGGCTTATTACCATCGAAAGATA
AAGTTGCTGCTGCGATTGGGATAATGTTTTCGGTGATTTCAATTCCACTT
ATGTTGGGCCCTTTGATTGCAGATGTCCANTGTATTATGCCTTGTTGGTT
GGCTTTCATCATCCTTCGTTGAAAATGTCCAATTTTTGATATTCACATAC
AGTGTTTTGTGGGGGACTGGAGCTGGTTTTGCAAATTACGCGGGAACATT
GATTATCAACCAATCATTTTACGGCGAGCAACTTTCATTCGCTAATGGTC
TCGCATCGAGTGGAACCGGATTTGGAGCTTTGATTTTAGGTCAATTACTA
ACTTGGATGCTACGTGAATTTGGATACAGGTGGACTTTCCGCGCCTGCGC
ATTAGTCCCTTTATTTTATGTGTTCTTATTTTATTCTCACAAACTTAGAC
GAAAACAAAATGATGTAGAACCTTTTCATGGAAAATTTAACGAAACTTCA
GAAGATGGAGCGCTAGAAAATCAAAAATTAAAAAGCGACGATAACAACAA
TAACTTAGACAACGAGACGCCAAAACCATCGAAACCGACAAAAGCATTTA
ACTTGAGCGAACTTATTGATAAAGAGCTGTGGCGCAACATGAAATTCATT
ATTTATCTTGCTGGTGTGTCTGTCTACTTGTTTGGAGCATTCATTCCTTT
TGTTTTTCTGGCTACATGGTAAAAGGTGACTCCTTCGTTGCACCGTTCTA
TATCGCAACATCCGTGAGTTTCGTTGGTGCTCTTCTTGGTGCCATCTCAA
AATTTCTTGATGCTAATGATAAATCGCACATGGAAGACGAAGAAGAACAG
GTCAAAATGACCTGCAATGGAGAACATTCATTACCTTTACATTACATTTA
GATTTCACACGCGATGGAGAACAACATCACCAAAGAAAATGCTCAGTTTC
TCATCTCCATTCTCTCCATTGTATCCACAATCACCAAAATATTCAGTGGA
GTCTTCTTAACAATGCAAAACGTCATCGATAGATTCTCGCTACTCCTTGC
TGCAATGTTCATAGCTGCTCTATCTAACATTATTGCAGCTAGGGGCACCA
CTTACTGGCATTTCTGCATTTTTTCCATCATTGCTGGACTATGTGAAGGA
TGTTTTGTTGGACAACTACCAGCAGTGGCTGTTGGCTTATTACCATCGAA
AGATAAAGTTGCTGCTGCGATTGGGATAATGTTTTCGGTGATTTCAATTC
CACTTATGTTGGGCCCTTTGATTGCAGATGTCCANTGTATTATGCCTTGT
TGGTTGGCTTTCATCATCCTTCGTTGAAAATGTCCAATTTTTGATATTCA
CATACAGTGTTTTGTGGGGGACTGGAGCTGGTTTTGCAAATTACGCGGGA
ACATTGATTATCAACCAATCATTTTACGGCGAGCAACTTTCATTCGCTAA
TGGTCTCGCATCGAGTGGAACCGGATTTGGAGCTTTGATTTTAGGTCAAT
TACTAACTTGGATGCTACGTGAATTTGGATACAGGTGGACTTTCCGCGCC
TGCGCATTAGTCCCTTTATTTTATGTGTTCTTATTTTATTCTCACAAACT
TAGACGAAAACAAAATGATGTAGAACCTTTTCATGGAAAATTTAACGAAA
CTTCAGAAGATGGAGCGCTAGAAAATCAAAAATTAAAAAGCGACGATAAC
AACAATAACTTAGACAACGAGACGCCAAAACCATCGAAACCGACAAAAGC
ATTTAACTTGAGCGAACTTATTGATAAAGAGCTGTGGCGCAACATGAAAT
TCATTATTTATCTTGCTGGTGTGTCTGTCTACTTGTTTGGAGCATTCATT
CCTTTTGTTTTTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014365XLOC_014365Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025601-proteinTCONS_00025601-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025601-exon-sc0000540-1575043694:84611..84881TCONS_00025601-exon-sc0000540-1575043694:84611..84881Clytia hemisphaericaexon
TCONS_00025601-exon-sc0000540-1575043694:83498..84232TCONS_00025601-exon-sc0000540-1575043694:83498..84232Clytia hemisphaericaexon
TCONS_00025601-exon-sc0000540-1575043694:81694..82069TCONS_00025601-exon-sc0000540-1575043694:81694..82069Clytia hemisphaericaexon
TCONS_00025601-exon-sc0000540-1575043694:80261..81103TCONS_00025601-exon-sc0000540-1575043694:80261..81103Clytia hemisphaericaexon
TCONS_00025601-exon-sc0000540-1510915933:84611..84881TCONS_00025601-exon-sc0000540-1510915933:84611..84881Clytia hemisphaericaexon
TCONS_00025601-exon-sc0000540-1510915933:83498..84232TCONS_00025601-exon-sc0000540-1510915933:83498..84232Clytia hemisphaericaexon
TCONS_00025601-exon-sc0000540-1510915933:81694..82069TCONS_00025601-exon-sc0000540-1510915933:81694..82069Clytia hemisphaericaexon
TCONS_00025601-exon-sc0000540-1510915933:80261..81103TCONS_00025601-exon-sc0000540-1510915933:80261..81103Clytia hemisphaericaexon
TCONS_00025601-exon-sc0000540-1491911889:84611..84881TCONS_00025601-exon-sc0000540-1491911889:84611..84881Clytia hemisphaericaexon
TCONS_00025601-exon-sc0000540-1491911889:83498..84232TCONS_00025601-exon-sc0000540-1491911889:83498..84232Clytia hemisphaericaexon
TCONS_00025601-exon-sc0000540-1491911889:81694..82069TCONS_00025601-exon-sc0000540-1491911889:81694..82069Clytia hemisphaericaexon
TCONS_00025601-exon-sc0000540-1491911889:80261..81103TCONS_00025601-exon-sc0000540-1491911889:80261..81103Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000540supercontigsc0000540:80261..84881 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.131879	0	0	0	0.150624	0.326405	0.316869	1.67337	1.308	1.74634	5.21468	9.88454	13.1531	0.360248	0.086132	2.7276	3.46741	14.2692	11.0219	20.9819	22.3936	5.99464	9.93037	7.80858	8.90525	1.47932	1.96521	0.205044	0.18097
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011701MFS
IPR020846MFS_dom
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
Blast
[Close]
BLAST of TCONS_00025601 vs. Swiss-Prot (Human)
Match: MOT10 (Monocarboxylate transporter 10 OS=Homo sapiens GN=SLC16A10 PE=1 SV=1)

HSP 1 Score: 86.6557 bits (213), Expect = 1.166e-17
Identity = 86/367 (23.43%), Postives = 169/367 (46.05%), Query Frame = 2 
Query:  440 VGWLSSSFVENVQFLIFTYSVLWGTGAGFANYAGTLIINQSFYGEQLSFANGLASSGTGFGALILGQLLTWMLREFGYRWTFRACALVPLFYVFL--FYSHKLRRKQNDVEPFHGKFNETSEDGALENQKLKSXXXXXXXXXETPKPSKPTKAFNLSELIDKELWRNMKFIIYLAGVSVYLFGAFIPFVFLISHAMENNITKENAQFXXXXXXXXXXXXXXFSGVFLTMQNVIDRFSLLLAAMFIAALSNIIAARGTTYWHFCIFSIIAGLCEGCFVGQLPAVAVGLLPSKDKVAAAIGIMFSVISIPLMLGPLIAGYMV-KGDSFVAPFYIATSVSFVGALLGAISKFLDANDKSHMEDEEEQVKM 1531
            VG +SSSFV +++ L  TY +++  G  FA Y  +L+I   ++ ++L   NG+ ++G+    ++L  LL  ++   G  +T R   +  +F +FL  F    L     D E             +L ++K               K S P K FN +      +++   + ++  G+ + LFG F+P+V L+ H  E    ++N + ++  + + S + ++  G        + +  L + + F   L +++    + +       +I GL +GCF+  +  +A  L+ ++D V+ AIG +   +SIP+ +GP IAG +  K  S+   FY+A     +G  +     ++ +  +  +     + KM
Sbjct:  154 VGLMSSSFVSSIEPLYLTYGIIFACGCSFA-YQPSLVILGHYFKKRLGLVNGIVTAGSSVFTILLPLLLRVLIDSVGLFYTLRVLCIF-MFVLFLAGFTYRPLATSTKDKE-------SGGSGSSLFSRK---------------KFSPPKKIFNFA------IFKVTAYAVWAVGIPLALFGYFVPYVHLMKHVNERFQDEKNKEVVLMCIGVTSGVGRLLFGRIADYVPGVKKVYLQVLSFFFIGLMSMMIPLCSIFGALIAVCLIMGLFDGCFISIMAPIAFELVGAQD-VSQAIGFLLGFMSIPMTVGPPIAGLLRDKLGSYDVAFYLAGVPPLIGGAVLCFIPWIHSKKQREISKTTGKEKM 489
The following BLAST results are available for this feature:
BLAST of TCONS_00025601 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MOT101.166e-1723.43Monocarboxylate transporter 10 OS=Homo sapiens GN=... [more]
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