TCONS_00025602 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025602
Unique NameTCONS_00025602
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1463

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025602 ID=TCONS_00025602|Name=TCONS_00025602|organism=Clytia hemisphaerica|type=transcript|length=1463bp
ttcATATTTTAGTTTTGAGATGTTCCagttaaaatttgtaaattctTTTT
TGTTAAACTTTTTGCTCGTAACGTCAGGTTTTGGTCTTGACTTGAAGTTT
ACAGAAACGTTTAATGATAAGCGGTATACATTGTATACTTATTTTCGTTC
GGAAGGTTTGACCGAGTTACAATGCATCATCGAATGTACAAATGATGATG
AATGTGGTTCAATCAATCATGaacaaaaacaacaattttgTGAACTCAAT
CAGTTGATGGATGAAAATCATGACGTCACTAACATGGAGTCACAGCAAGG
ATGGAGACACTTCATTAAAAGCAAAAAGAAAACAGAAGCTATTCCATACA
AACACGAAATTATCATCAATGAGGaaatgacACCATCACGAAATCGTGTT
CTGGCCATCATACCGTTTCAAACAGACTATTGGGAAGTATCGTTCAATTT
CATCTTGGAACAAGATTTCCCATACTGGACTAACATTCTTCGATTGGCTG
CACTAGAGCCTGGGCAGAGGACTACCGGATGGCGTATCCCGGGCATTTAC
ATCTATGGCAGAATGCTTGAGATTTGGTCTAGTGAAACAGAACAAGGTGT
TATCAAAAAAGTGTATAATCTCAACCTAAATCAAAAGTATCATCTCAAAG
TTTGGCAATGTGTAGACAAAGATGACTCTAGCAAAGTGCAAAAACTTATT
ATCCTGGATGGTGAAATTATCTCGGTAGTCGAACATGTCAAATTCACAAC
ACCCTTCCGTAATGTGCAATTCTTCTTTGGAGATGTTGGTTATCCTCCAG
CTCCAGTTCGTGTTTCAAATTTGATATACACGCCTGATCTATTATACCAA
GgAACCAGCTTCCCCGCATCCAGTGACGATTTCATACTTCTCAAAAGATT
CAAACGTTGGCCACCTGGTCCTAACTGGCTTATCAGGTTTTATTGGCTAC
TACGTGACAAAGCCGGGTTGAAGACAGACCATTGGCCTAAACCTCTCATG
ATTTACAAGACAATCAATGGCAAAATACATTATTTACCCATGTTTCAAAT
CAATAAGAATACAATGAAATTATatgtttctttttcatcaaatggGAATA
ACGGCAGACGTTTCACAGGTGTTAATTTGGAACCGTTTTTTGGTGGAGCA
CCGCTGCAAATCAAGTTTCGATTTTTTTCGCATTCGGATGGCACATACGA
GGCTAGTTTAAATGTTGATGGTGTTGCAACATACACTATGTCAGTTGATG
ACTATGTTGAGTACGAAGATGTTTATGCTGGAACTGGGGCTTCACCTGAT
GTTGACTTTGTTGTCAGTGACCTAGTTATCAAGGAGGTTGTTTAAAGAAT
TGATCTCGCGCTAAAATGTACAAGTAATCATACTCTTGTCTTGCGAATAG
ACGGGgtggggggtccgaataagcaggagggtagaaagattttctaaatt
ctaataagcgggg
Run BLAST on NCBI

protein sequence of TCONS_00025602-protein

>TCONS_00025602-protein ID=TCONS_00025602-protein|Name=TCONS_00025602-protein|organism=Clytia hemisphaerica|type=polypeptide|length=447bp
SYFSFEMFQLKFVNSFLLNFLLVTSGFGLDLKFTETFNDKRYTLYTYFRS
EGLTELQCIIECTNDDECGSINHEQKQQFCELNQLMDENHDVTNMESQQG
WRHFIKSKKKTEAIPYKHEIIINEEMTPSRNRVLAIIPFQTDYWEVSFNF
ILEQDFPYWTNILRLAALEPGQRTTGWRIPGIYIYGRMLEIWSSETEQGV
IKKVYNLNLNQKYHLKVWQCVDKDDSSKVQKLIILDGEIISVVEHVKFTT
PFRNVQFFFGDVGYPPAPVRVSNLIYTPDLLYQGTSFPASSDDFILLKRF
KRWPPGPNWLIRFYWLLRDKAGLKTDHWPKPLMIYKTINGKIHYLPMFQI
NKNTMKLYVSFSSNGNNGRRFTGVNLEPFFGGAPLQIKFRFFSHSDGTYE
ASLNVDGVATYTMSVDDYVEYEDVYAGTGASPDVDFVVSDLVIKEVV
Run BLAST on NCBI

transcript from alignment at sc0000540:115651..120173-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025602 ID=TCONS_00025602|Name=TCONS_00025602|organism=Clytia hemisphaerica|type=transcript|length=4523bp|location=Sequence derived from alignment at sc0000540:115651..120173- (Clytia hemisphaerica)
TTCATATTTTAGTTTTGAGATGTTCCAGTTAAAATTTGTAAATTCTTTTT
TGTTAAACTTTTTGCTCGTAACGTCAGGTTTTGGTCTTGACTTGAAGTTT
ACAGAAACGTTTAATGATAAGCGGTATACATTGTATACTTATTTTCGTTC
GGAAGGTATGTTAGAGCAACCATGTTAATTACACCCCTGTCTCACAGCCC
CGGTGGAACTGTTTTCTTCAGTGGGGATAAAACTACTATCAAAATCCCAT
CGGGGATAGAAATTTTATTGTTCCAAGGTTAGAAAATCCAGTGGGGATGG
TTTTGGAGTGCAATTTTTAAACTTTGAATTTCTAATGGGGATGAAATCAA
ATCAATATACCAGTGGGGCTGAAATTTCAGGGTATTTTCCCACTCCGGGG
ACGTCAAAAAGGGTGTTTAATTATATTAAGGTTTAACTTAAGGCTTCGTT
TGACTTCAATTCTAAAAACTTAAAACGCTTATTCACTTAATAAAATTCAT
GAGAACTAAAATTAAATCATTTAATTTTTTGAATGCCATATTTTTCTCAT
GCACCAAAGCGATGAGCCGCTTCAGGCCGGTCTCCACTTGCGCGCGCTTC
AATTGCACTTTTTCGAGCTATTGGTCAAAAGAAAAATGAAGCAACTCCAT
TGGCGCGATCTGACGTAACGGTTGAAAAAAGTTGAAATGTGTTCAACTTT
TTTTTGTTTGAGGACGCGTTACATTTTTGTGACGTTAGCAAAAAGGATTG
AAGCCAAAAAGTGCGATCGCAGCACGTGCAAGTGGAAAGTGGCTTCTAGA
GACAAGGACTGTCTTTTTTTAAAAGGTCTTATTAGGTCCAAGGCACGAAA
ATTATACAATTCGGTATTAAAGGGATAATCAGATGGTTTGAGATATTTTG
CCTGCAGATAGCTTCTAGGATTTTAGGAATAAAAACCTCTAAATTTTTCG
GTGTATTTATTTTCTTAACTCAAGTTATGCCAATTTGAAATCTCGAAAAA
TGGGACTTTTCAGGGACTTTTCAAAATTTCAAAGTGGTATAACTTTAGTT
AGGAAAATAAGTACAAAAAAAAATTTAGAAATTTTTCTTAAAATCCAAGA
AGCTATCTATAGGCAAAATATCTCAAACCATCTGATAATCCCTTTAAATA
TTCGGTTGACCACCTCACACTATATATATACACGCTGATCAATACCACTT
TTTATGAATAGAAAGTAGTCTTGATAAATTCCGCTGAGAGTTAATCACCA
TGGCAATAATTTCAAAATGAGATAAATGATGTTCGTGACATAATTTATGA
AAAAGTCTATCGTGTCGAAAACAAAGTCAAGATTGCTGTGTTCTTTTCGA
AGGTTTGACCGAGTTACAATGCATCATCGAATGTACAAATGATGATGAAT
GTGGTTCAATCAATCATGAACAAAAACAACAATTTTGTGAACTCAATCAG
TTGATGGATGAAAATCATGACGTCACTAACATGGAGTCACAGCAAGGATG
GAGACACTTCATTAAAAGCAAAAAGGTAATTAATTTCTCATGCTTAATTT
CTAAAAAAGAGCAACAAGTTTATTATTTTAAGCGTCTACCAGTCTACCCA
ATAATTGATTTTTTACCAATATTTTTTACTTATACATTCCTACCCCTATC
AACCCTTTAATGGCGTGGTCAGTGTTTGCAGGTACTGGTAACGAGTTTAC
AAGGACAATCTTTCCTTATTCTAAACGAGGCCTCCAGTCACATGTCTACA
AGTGAAAAGTTTTAAATGGGATTAGCGCATGACTAAACTCGTCTTTTATA
TATCTTAGATGACTTGGTCCTTTATTCCTTTTAGATCATTTTTAGAGTTC
TATAAATAAACTCCGGTTTAGGAGTTTCTTAAAATCAGTGTTTTTTTCAT
TTGTAATTGTGCGTAAGTCCGATCAATTGCGATAGTCGGCTTCGATTTCC
CGATCTTTCCGGTTTGATTTCCCGATTGAGTTTCCCTTTGCGCTCGCACT
TACTAGGATATACTCTTTTAAATTGTATGCTAGATATATTAAGTAAAGTG
ACCCAGCCGTCTTCACGGCTCTTTTATTCTTATAGGTTTATAATATTAAC
TTTCACTCTATAGAAAACAGAAGCTATTCCATACAAACACGAAATTATCA
TCAATGAGGGTGAGATTCTATTATTTATCCTCTGTAGTTAGTTTTTTTTT
CCATTTATTAGTTCTTTAATAGTTTATTGTTAGCTTAGTTTGGGTTCCTA
CCTCCTGGCGGTATGATCTGGTGGTACTTTTGCGGGAGGCTAGGAACCTT
TAGTTTTGTACTATTTGTTCGTGTTACCTATACATAGATAAAAAAAGAAA
AAAGATTCTATTATACCTGTATTATTATACGCAGTGCTAATGAGTCCCAA
TAGGTTATATCGTAATTCGCTTCGCTGAATACAGGTGGGGGGTGGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAAACAAGGCAAAATTT
GCAGATTTTTCACTACCCCCCCCCCTTTACAAAGCATGCTTTTCTTTTTA
CTTTTCTATCTCCCATTAGACTTAATTCATACATATGGAGACAAAAAAAA
TTACAAAAATTCAAAAAAACGTCTTTCAAAGTCACCTAAACTCATTATAT
TTTTAGAAATGACACCATCACGAAATCGTGTTCTGGCCATCATACCGTTT
CAAACAGACTATTGGGAAGTATCGTTCAATTTCATCTTGGAACAAGATTT
CCCATACTGGACTAACATTCTTCGATTGGCTGCACTAGAGCCTGGGCAGA
GGACTACCGGATGGCGTATCCCGGGCATTTACATCTATGGCAGAATGCTT
GAGATTTGGTCTAGTGAAACAGAACAAGGTGTTATCAAAAAAGTGTATAA
TCTCAACCTAAATCAAAAGTATCATCTCAAAGTTTGGCAATGTGTAGACA
AAGATGACTCTAGCAAAGTGCAAAAACTTATTATCCTGGATGGTGAAATT
ATCTCGGTAGTCGAACATGTCAAATTCACAACACCCTTCCGTAATGTGCA
ATTCTTCTTTGGAGATGTTGGTTATCCTCCAGCTCCAGTTCGTGTTTCAA
ATTTGATATACACGCCTGATCTATTATACCAAGGTAGACTTATTCAATTT
TTAGCCTTCCTCTGATATTTTACTCAGACAAGAAAGGACACGACTATAAT
ATAAACAGTAGACGCCTTCAAGTAGTTAGTTTTTTTGAAGAAAAAAAAAC
AAAACAAAAAAAAAAAAGCAGAAGATTCAACGTAAAGTTTTCATGTTTAC
TTGGTTAGCGTATTATTTCTATGAACTACCACGAAATTCCGTGGAGCTGC
GAATGTTTCTTATTGAAGAGATACCAAAATGCCGAAGGTGCAAAACTTGA
GAAAAATAATTAAAGAATACCCCCTCAAATAAACTTGCCCTTCGAATAAA
CGCCTTCCCTATAGGGGAGCATTTATTTGAAACAAGTAGCTGTAAGACAG
TATAACATGAAGGAGAATTAAAGGAGTTTAAGCTTAACTATACGATGATG
ATAATTGTATCCTTTTAGTATCCAAATAAATTATTTAATAAACACCCCCA
ATCTTTTAAATGCCACTAAAAAAATAATGAACGCCTGGGGTGCTTATTAG
AAGTAATACGGTATACTATACTCGTCTGTATGCTCAATGTAAGATTTTTT
TTGTCTTTTAGGAACCAGCTTCCCCGCATCCAGTGACGATTTCATACTTC
TCAAAAGATTCAAACGTTGGCCACCTGGTCCTAACTGGCTTATCAGGTTT
TATTGGCTACTACGTGACAAAGCCGGGTTGAAGACAGACCATTGGCCTAA
ACCTCTCATGATTTACAAGACAATCAATGGCAAAATACATTATTTACCCA
TGTTTCAAATCAATAAGAATACAATGAAATTATATGTTTCTTTTTCATCA
AATGGGAATAACGGCAGACGTTTCACAGGTGTTAATTTGGAACCGTTTTT
TGGTGGAGCACCGCTGCAAATCAAGTTTCGATTTTTTTCGCATTCGGATG
GCACATACGAGGCTAGTTTAAATGTTGATGGTGTTGCAACATACACTATG
TCAGTTGATGACTATGTTGAGTACGAAGATGTTTATGCTGGAACTGGGGC
TTCACCTGATGTTGACTTTGTTGTCAGTGACCTAGTTATCAAGGAGGTTG
TTTAAAGAATTGATCTCGCGCTAAAATGTACAAGTAATCATACTCTTGTC
TTGCGAATAGACGGGGTGGGGGGTCCGAATAAGCAGGAGGGTAGAAAGAT
TTTCTAAATTCTAATAAGCGGGG

Coding sequence (CDS) from alignment at sc0000540:115651..120173-

>TCONS_00025602 ID=TCONS_00025602|Name=TCONS_00025602|organism=Clytia hemisphaerica|type=CDS|length=6720bp|location=Sequence derived from alignment at sc0000540:115651..120173- (Clytia hemisphaerica)
GAACCAGCTTCCCCGCATCCAGTGACGATTTCATACTTCTCAAAAGATTC
AAACGTTGGCCACCTGGTCCTAACTGGCTTATCAGGTTTTATTGGCTACT
ACGTGACAAAGCCGGGTTGAAGACAGACCATTGGCCTAAACCTCTCATGA
TTTACAAGACAATCAATGGCAAAATACATTATTTACCCATGTTTCAAATC
AATAAGAATACAATGAAATTATATGTTTCTTTTTCATCAAATGGGAATAA
CGGCAGACGTTTCACAGGTGTTAATTTGGAACCGTTTTTTGGTGGAGCAC
CGCTGCAAATCAAGTTTCGATTTTTTTCGCATTCGGATGGCACATACGAG
GCTAGTTTAAATGTTGATGGTGTTGCAACATACACTATGTCAGTTGATGA
CTATGTTGAGTACGAAGATGTTTATGCTGGAACTGGGGCTTCACCTGATG
TTGACTTTGTTGTCAGTGACCTAGTTATCAAGGAGGTTGTTTAAAAATGA
CACCATCACGAAATCGTGTTCTGGCCATCATACCGTTTCAAACAGACTAT
TGGGAAGTATCGTTCAATTTCATCTTGGAACAAGATTTCCCATACTGGAC
TAACATTCTTCGATTGGCTGCACTAGAGCCTGGGCAGAGGACTACCGGAT
GGCGTATCCCGGGCATTTACATCTATGGCAGAATGCTTGAGATTTGGTCT
AGTGAAACAGAACAAGGTGTTATCAAAAAAGTGTATAATCTCAACCTAAA
TCAAAAGTATCATCTCAAAGTTTGGCAATGTGTAGACAAAGATGACTCTA
GCAAAGTGCAAAAACTTATTATCCTGGATGGTGAAATTATCTCGGTAGTC
GAACATGTCAAATTCACAACACCCTTCCGTAATGTGCAATTCTTCTTTGG
AGATGTTGGTTATCCTCCAGCTCCAGTTCGTGTTTCAAATTTGATATACA
CGCCTGATCTATTATACCAAGAAAACAGAAGCTATTCCATACAAACACGA
AATTATCATCAATGAGGGTTTGACCGAGTTACAATGCATCATCGAATGTA
CAAATGATGATGAATGTGGTTCAATCAATCATGAACAAAAACAACAATTT
TGTGAACTCAATCAGTTGATGGATGAAAATCATGACGTCACTAACATGGA
GTCACAGCAAGGATGGAGACACTTCATTAAAAGCAAAAAGTCATATTTTA
GTTTTGAGATGTTCCAGTTAAAATTTGTAAATTCTTTTTTGTTAAACTTT
TTGCTCGTAACGTCAGGTTTTGGTCTTGACTTGAAGTTTACAGAAACGTT
TAATGATAAGCGGTATACATTGTATACTTATTTTCGTTCGGAAGGAACCA
GCTTCCCCGCATCCAGTGACGATTTCATACTTCTCAAAAGATTCAAACGT
TGGCCACCTGGTCCTAACTGGCTTATCAGGTTTTATTGGCTACTACGTGA
CAAAGCCGGGTTGAAGACAGACCATTGGCCTAAACCTCTCATGATTTACA
AGACAATCAATGGCAAAATACATTATTTACCCATGTTTCAAATCAATAAG
AATACAATGAAATTATATGTTTCTTTTTCATCAAATGGGAATAACGGCAG
ACGTTTCACAGGTGTTAATTTGGAACCGTTTTTTGGTGGAGCACCGCTGC
AAATCAAGTTTCGATTTTTTTCGCATTCGGATGGCACATACGAGGCTAGT
TTAAATGTTGATGGTGTTGCAACATACACTATGTCAGTTGATGACTATGT
TGAGTACGAAGATGTTTATGCTGGAACTGGGGCTTCACCTGATGTTGACT
TTGTTGTCAGTGACCTAGTTATCAAGGAGGTTGTTTAAAAATGACACCAT
CACGAAATCGTGTTCTGGCCATCATACCGTTTCAAACAGACTATTGGGAA
GTATCGTTCAATTTCATCTTGGAACAAGATTTCCCATACTGGACTAACAT
TCTTCGATTGGCTGCACTAGAGCCTGGGCAGAGGACTACCGGATGGCGTA
TCCCGGGCATTTACATCTATGGCAGAATGCTTGAGATTTGGTCTAGTGAA
ACAGAACAAGGTGTTATCAAAAAAGTGTATAATCTCAACCTAAATCAAAA
GTATCATCTCAAAGTTTGGCAATGTGTAGACAAAGATGACTCTAGCAAAG
TGCAAAAACTTATTATCCTGGATGGTGAAATTATCTCGGTAGTCGAACAT
GTCAAATTCACAACACCCTTCCGTAATGTGCAATTCTTCTTTGGAGATGT
TGGTTATCCTCCAGCTCCAGTTCGTGTTTCAAATTTGATATACACGCCTG
ATCTATTATACCAAGAAAACAGAAGCTATTCCATACAAACACGAAATTAT
CATCAATGAGGGTTTGACCGAGTTACAATGCATCATCGAATGTACAAATG
ATGATGAATGTGGTTCAATCAATCATGAACAAAAACAACAATTTTGTGAA
CTCAATCAGTTGATGGATGAAAATCATGACGTCACTAACATGGAGTCACA
GCAAGGATGGAGACACTTCATTAAAAGCAAAAAGTCATATTTTAGTTTTG
AGATGTTCCAGTTAAAATTTGTAAATTCTTTTTTGTTAAACTTTTTGCTC
GTAACGTCAGGTTTTGGTCTTGACTTGAAGTTTACAGAAACGTTTAATGA
TAAGCGGTATACATTGTATACTTATTTTCGTTCGGAAGGAACCAGCTTCC
CCGCATCCAGTGACGATTTCATACTTCTCAAAAGATTCAAACGTTGGCCA
CCTGGTCCTAACTGGCTTATCAGGTTTTATTGGCTACTACGTGACAAAGC
CGGGTTGAAGACAGACCATTGGCCTAAACCTCTCATGATTTACAAGACAA
TCAATGGCAAAATACATTATTTACCCATGTTTCAAATCAATAAGAATACA
ATGAAATTATATGTTTCTTTTTCATCAAATGGGAATAACGGCAGACGTTT
CACAGGTGTTAATTTGGAACCGTTTTTTGGTGGAGCACCGCTGCAAATCA
AGTTTCGATTTTTTTCGCATTCGGATGGCACATACGAGGCTAGTTTAAAT
GTTGATGGTGTTGCAACATACACTATGTCAGTTGATGACTATGTTGAGTA
CGAAGATGTTTATGCTGGAACTGGGGCTTCACCTGATGTTGACTTTGTTG
TCAGTGACCTAGTTATCAAGGAGGTTGTTTAAAAATGACACCATCACGAA
ATCGTGTTCTGGCCATCATACCGTTTCAAACAGACTATTGGGAAGTATCG
TTCAATTTCATCTTGGAACAAGATTTCCCATACTGGACTAACATTCTTCG
ATTGGCTGCACTAGAGCCTGGGCAGAGGACTACCGGATGGCGTATCCCGG
GCATTTACATCTATGGCAGAATGCTTGAGATTTGGTCTAGTGAAACAGAA
CAAGGTGTTATCAAAAAAGTGTATAATCTCAACCTAAATCAAAAGTATCA
TCTCAAAGTTTGGCAATGTGTAGACAAAGATGACTCTAGCAAAGTGCAAA
AACTTATTATCCTGGATGGTGAAATTATCTCGGTAGTCGAACATGTCAAA
TTCACAACACCCTTCCGTAATGTGCAATTCTTCTTTGGAGATGTTGGTTA
TCCTCCAGCTCCAGTTCGTGTTTCAAATTTGATATACACGCCTGATCTAT
TATACCAAGAAAACAGAAGCTATTCCATACAAACACGAAATTATCATCAA
TGAGGGTTTGACCGAGTTACAATGCATCATCGAATGTACAAATGATGATG
AATGTGGTTCAATCAATCATGAACAAAAACAACAATTTTGTGAACTCAAT
CAGTTGATGGATGAAAATCATGACGTCACTAACATGGAGTCACAGCAAGG
ATGGAGACACTTCATTAAAAGCAAAAAGTCATATTTTAGTTTTGAGATGT
TCCAGTTAAAATTTGTAAATTCTTTTTTGTTAAACTTTTTGCTCGTAACG
TCAGGTTTTGGTCTTGACTTGAAGTTTACAGAAACGTTTAATGATAAGCG
GTATACATTGTATACTTATTTTCGTTCGGAAGGAACCAGCTTCCCCGCAT
CCAGTGACGATTTCATACTTCTCAAAAGATTCAAACGTTGGCCACCTGGT
CCTAACTGGCTTATCAGGTTTTATTGGCTACTACGTGACAAAGCCGGGTT
GAAGACAGACCATTGGCCTAAACCTCTCATGATTTACAAGACAATCAATG
GCAAAATACATTATTTACCCATGTTTCAAATCAATAAGAATACAATGAAA
TTATATGTTTCTTTTTCATCAAATGGGAATAACGGCAGACGTTTCACAGG
TGTTAATTTGGAACCGTTTTTTGGTGGAGCACCGCTGCAAATCAAGTTTC
GATTTTTTTCGCATTCGGATGGCACATACGAGGCTAGTTTAAATGTTGAT
GGTGTTGCAACATACACTATGTCAGTTGATGACTATGTTGAGTACGAAGA
TGTTTATGCTGGAACTGGGGCTTCACCTGATGTTGACTTTGTTGTCAGTG
ACCTAGTTATCAAGGAGGTTGTTTAAAAATGACACCATCACGAAATCGTG
TTCTGGCCATCATACCGTTTCAAACAGACTATTGGGAAGTATCGTTCAAT
TTCATCTTGGAACAAGATTTCCCATACTGGACTAACATTCTTCGATTGGC
TGCACTAGAGCCTGGGCAGAGGACTACCGGATGGCGTATCCCGGGCATTT
ACATCTATGGCAGAATGCTTGAGATTTGGTCTAGTGAAACAGAACAAGGT
GTTATCAAAAAAGTGTATAATCTCAACCTAAATCAAAAGTATCATCTCAA
AGTTTGGCAATGTGTAGACAAAGATGACTCTAGCAAAGTGCAAAAACTTA
TTATCCTGGATGGTGAAATTATCTCGGTAGTCGAACATGTCAAATTCACA
ACACCCTTCCGTAATGTGCAATTCTTCTTTGGAGATGTTGGTTATCCTCC
AGCTCCAGTTCGTGTTTCAAATTTGATATACACGCCTGATCTATTATACC
AAGAAAACAGAAGCTATTCCATACAAACACGAAATTATCATCAATGAGGG
TTTGACCGAGTTACAATGCATCATCGAATGTACAAATGATGATGAATGTG
GTTCAATCAATCATGAACAAAAACAACAATTTTGTGAACTCAATCAGTTG
ATGGATGAAAATCATGACGTCACTAACATGGAGTCACAGCAAGGATGGAG
ACACTTCATTAAAAGCAAAAAGTCATATTTTAGTTTTGAGATGTTCCAGT
TAAAATTTGTAAATTCTTTTTTGTTAAACTTTTTGCTCGTAACGTCAGGT
TTTGGTCTTGACTTGAAGTTTACAGAAACGTTTAATGATAAGCGGTATAC
ATTGTATACTTATTTTCGTTCGGAAGGAACCAGCTTCCCCGCATCCAGTG
ACGATTTCATACTTCTCAAAAGATTCAAACGTTGGCCACCTGGTCCTAAC
TGGCTTATCAGGTTTTATTGGCTACTACGTGACAAAGCCGGGTTGAAGAC
AGACCATTGGCCTAAACCTCTCATGATTTACAAGACAATCAATGGCAAAA
TACATTATTTACCCATGTTTCAAATCAATAAGAATACAATGAAATTATAT
GTTTCTTTTTCATCAAATGGGAATAACGGCAGACGTTTCACAGGTGTTAA
TTTGGAACCGTTTTTTGGTGGAGCACCGCTGCAAATCAAGTTTCGATTTT
TTTCGCATTCGGATGGCACATACGAGGCTAGTTTAAATGTTGATGGTGTT
GCAACATACACTATGTCAGTTGATGACTATGTTGAGTACGAAGATGTTTA
TGCTGGAACTGGGGCTTCACCTGATGTTGACTTTGTTGTCAGTGACCTAG
TTATCAAGGAGGTTGTTTAAAAATGACACCATCACGAAATCGTGTTCTGG
CCATCATACCGTTTCAAACAGACTATTGGGAAGTATCGTTCAATTTCATC
TTGGAACAAGATTTCCCATACTGGACTAACATTCTTCGATTGGCTGCACT
AGAGCCTGGGCAGAGGACTACCGGATGGCGTATCCCGGGCATTTACATCT
ATGGCAGAATGCTTGAGATTTGGTCTAGTGAAACAGAACAAGGTGTTATC
AAAAAAGTGTATAATCTCAACCTAAATCAAAAGTATCATCTCAAAGTTTG
GCAATGTGTAGACAAAGATGACTCTAGCAAAGTGCAAAAACTTATTATCC
TGGATGGTGAAATTATCTCGGTAGTCGAACATGTCAAATTCACAACACCC
TTCCGTAATGTGCAATTCTTCTTTGGAGATGTTGGTTATCCTCCAGCTCC
AGTTCGTGTTTCAAATTTGATATACACGCCTGATCTATTATACCAAGAAA
ACAGAAGCTATTCCATACAAACACGAAATTATCATCAATGAGGGTTTGAC
CGAGTTACAATGCATCATCGAATGTACAAATGATGATGAATGTGGTTCAA
TCAATCATGAACAAAAACAACAATTTTGTGAACTCAATCAGTTGATGGAT
GAAAATCATGACGTCACTAACATGGAGTCACAGCAAGGATGGAGACACTT
CATTAAAAGCAAAAAGTCATATTTTAGTTTTGAGATGTTCCAGTTAAAAT
TTGTAAATTCTTTTTTGTTAAACTTTTTGCTCGTAACGTCAGGTTTTGGT
CTTGACTTGAAGTTTACAGAAACGTTTAATGATAAGCGGTATACATTGTA
TACTTATTTTCGTTCGGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014366XLOC_014366Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025602-exon-sc0000540-1575043694:120019..120173TCONS_00025602-exon-sc0000540-1575043694:120019..120173Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1575043694:118649..118821TCONS_00025602-exon-sc0000540-1575043694:118649..118821Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1575043694:118015..118060TCONS_00025602-exon-sc0000540-1575043694:118015..118060Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1575043694:116841..117317TCONS_00025602-exon-sc0000540-1575043694:116841..117317Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1575043694:115651..116262TCONS_00025602-exon-sc0000540-1575043694:115651..116262Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1510915933:120019..120173TCONS_00025602-exon-sc0000540-1510915933:120019..120173Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1510915933:118649..118821TCONS_00025602-exon-sc0000540-1510915933:118649..118821Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1510915933:118015..118060TCONS_00025602-exon-sc0000540-1510915933:118015..118060Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1510915933:116841..117317TCONS_00025602-exon-sc0000540-1510915933:116841..117317Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1510915933:115651..116262TCONS_00025602-exon-sc0000540-1510915933:115651..116262Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1491911889:120019..120173TCONS_00025602-exon-sc0000540-1491911889:120019..120173Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1491911889:118649..118821TCONS_00025602-exon-sc0000540-1491911889:118649..118821Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1491911889:118015..118060TCONS_00025602-exon-sc0000540-1491911889:118015..118060Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1491911889:116841..117317TCONS_00025602-exon-sc0000540-1491911889:116841..117317Clytia hemisphaericaexon
TCONS_00025602-exon-sc0000540-1491911889:115651..116262TCONS_00025602-exon-sc0000540-1491911889:115651..116262Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025602-proteinTCONS_00025602-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000540supercontigsc0000540:115651..120173 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0565833	0.110355	0.0320333	0	0.0381529	0.0301489	0	0	0.0476817	0.0295307	0.0573265	0.0188421	3.1987	1.79773	0.851442	0.758566	0.318577	0.391837	9.59382	9.56717	0.41031	0.560377	0.389264	0.796269	1.70103	1.89766	0.077587	0.0828029	0.0314015	0.0639864
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025602 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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