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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025671 ID=TCONS_00025671|Name=TCONS_00025671|organism=Clytia hemisphaerica|type=transcript|length=3661bp
tcaGCCCATACTCCAAATACCTTAATCTTCATATCATATAGGACTTTTAG
TCTAAACTGTCAGCCGTGTACTGTAAGTTGGTATAAAATCCCTCTTTTTC
TAATTCCGACGCCCACCTTCAGTGTTGGTAGTTTAGTAAGCAGTATTGTT
TAAAAGTATTAATTCTTgcaaaaaatgaattaaaatgttacaaaaattaA
CACTCTTCAGAAAGATGGTCCCAAGAAGACTAATAAATTGTCCTGAAAAG
ACCAAAATAGGGTGGTTTCTGTGTCAAACTATGTCCCCAAAGACTTTCTT
TAGTGCATGttaaatagaataaaaaccaCTTCTCTATCTGAAGTAAAATG
GGGTGGTAGCATGCAAAAATTCTCTAAAACCTGTTTATTACTCATACaag
tctgagattttagtacaaCCCTGAATGAAAAGCAATGCGTAACAGTATct
gtttattattttcagtgaaaatttcgtaatttaaaataataactAAAATC
AACCATTCAAAGATGTCCTCACAGAACCTCAACAACCACTTCCAAAATCT
TTTATCCAAcATCGATGGAGGGTTAGCAATTCTGGTTACAGACAGGAGTG
GAGTGCCAATAGTCAAAGTGTTATCAGGGAAATGTCCAGAATCTGCGACC
AGAGGGAGCTTCTTGTCCACCTTTGCTACTGCTACAGAACAGgccAGTAA
ATTGGGTTTATCGAAGAACAAACGTATGATTTGTGTATATGAATCTTTTC
AAGTAGTGATGTTCAACTATCTGCCGTTGGTTGTCACAATTATCACTAGC
ACAAACGCTAACACAGGATTGGTGCTGGATTTAGAAAGAGACATTTCGCC
TGTATTGGATAAATTGAAGTCGCACGTCAGAAACTGATGAAACGTACTTT
TTCTAAACATagACCCGTTTTTTAGGTCTCATCGGTAGCCACCTTCAAAC
AAAACAATGTCATTGCCACTAAAAAGGTTTAtgttattttggtatttttt
tggtataatatTTCTAGCattatataaaaagataatcacCATTTGAAATA
CTTGATCAAAAATACagtagctctagtttagacagcTCTACTATCCAAAa
tcaatgtcttctgacatcaATGAATGCAAAGACTTCTCTTTTCAAAGCAA
GTATTTTAACTGCCAATTTTTTGGCCACTTTTCGCCTATCAATTGGAAAA
GGCGGGCGGAGTCGGCTGTTTAAACTGGAGCTTAAAGTTGATGTATTTCT
TTGAAGCACTTGTTAACACTAAAATCACTTACTATGAAATTGCCTCTTTT
TGAAAGTTTAGCTACATTCAAGAATCTAGCTCGTGAAAATCTAAACATCA
TATCTAAATCACAGCTTGCTCCTCCATTTAGACAATATAATTTTAATAAG
AAAGAATTTTGTATTAATTTATTGTACTAATAATGTTTCGAACTGAATTC
CATTTCAAATTATTCACTTTACAAAATCaatatcaataaaaaaatatttt
tattatcaTGTTAAAAAACGAATTTGTTCATTTCTTGTCCTTGAagtttt
taatttacaagctttttttataagaatagtgtgagggtgagggtcaagta
ttcttaagaaatttccaaaatagagggtgaaatattcttaacgcaTTCTT
ACTTTTTTACACTTGACTTTTATACGAACATgataaatgatcaatttgaa
aGTTTAAGACTCTTTAGTGCACATTGGGAGCTAAGATTATATTTCTGCCT
CGAAGTTTCAATTTAAGTCTAacgaaagaaaagtttttcctGTAAGCCAA
ATaaaatgaatgtatttttatCAACATTTGTGAAACTCACCCTTGAGGGT
AAGGGTGAGTGGGGTATTTTtggggtattcttacgatttgaccaattttc
accctgatattcttataaacgatattcatataaaaaaaagcgtgtatata
cTTTCACTCAAAAAGCTAAAGAGAAAGTTTTTTCCACAAAAATATActtt
ctttcaaagcaagtcCTTGCTTGGAAAATTTCGTTTTTACTTACTGTCAT
TGAAACAATATAGTTTCATAAATTAAGCAAATCTAAATAAAATTAGGGTT
TTCTTTTACATCTTTATAAATTTCACTCTGCATAAAAAATATTCATctta
aataagtttttttttcattcgtGTGTTTCTGTCGAGTCCTTGAGAGATAT
AATTTTATTATGATATATTCAATGTTTTTCCAATGcattttttcagatat
ttttatACTTTCAAGTAGTAAATGGATGGTCCAGTGAAAGCTATTAAACT
ATTGAAACAGAAGTTAATTCTGCAGTGTTTCTGAAAGTTCCTGTGAATAT
TCGCATTTTTTTATACCAACCAAActgaaccaaacagtttttccaATTTC
CAATTTCAGTCTGGTCAAGTGCTTGCTGATCTTGTAGGTCATACATTGGC
TTCAAATCACTCAAATCATAATGAATTTATTTATAACTGGTATTCAAATT
CACGAATAAATTCTTGGGTTGAAACTGGACACATACTTTGGCTTTGTTTG
TGTTGGTGCATAAATCAACAGTTTTGGTCTTACTAATAACTGTCATTCTG
CGTTTTTCTTCATCCCCGCTCACCAGGAAGTTCTGTCTCTTTTCCTcctc
aaacattttctttcgcCTCATTCCTCCAAAACTTTGAATAAGCGAggttt
tgttattgttttgatctTGCGCTCGTTTCCCTTCACCTGAGAACACAGTT
TGAATTGTGAACATTGTGTTTCGTGCTTTTCGGCGGCCGTTCAATTCTTT
GAGTTTGTCGATTGTTTTGAATTTGTGGTCGCGTGGTGCGACATTGTTCT
CTTTAAACCAATCATGAGCAAGTGCTTTGTCAGCATTTAGCCTTGTGTTC
ATATTTTTATCCAGGAGTTTCTCTAACAAATCTTTAGCTTCATTTGACAC
GCCATTCCATAAGGCGGAAGACAAATCAGCTGGGCGTGTTAAGATGTCTC
CGTACATGACTTCTAGACGATCGTTCCAAAATGGCGGATATCCAACTAAT
AGGATGTAGAGAACAACGCCTGCCGCCCATGTATCAACACCATAGTTGAT
TGGGTGTTCTAGAATAACTTCGGGAGCTAAAAACAATGGCATTCCTTGAG
GTTCAACTTTGGTATACTTCTGACCTCGTTCCAACCTCAAAGAGAGGCTG
AAATCACCAATCTTTAAAACTTCTCCGTAGTCACTTTGTTTAAGCCAGAT
ATTTTCTGTTGTTAAGCAACGGTGCACGACGCGCCGTTTACGTAAATATG
ACAACCCTTCGAATAATTGCTTCATGAAGAAGGCTGCATCACGCTCTGTG
TAGGTCGTATAACTTGGCAATTGGTCAAACAGTTTACCATCTTTAACGAA
TTCGGTCACTAAGAACTGCTCTTTGGGCGTATTGAAAATTCGAACCAATT
CTATCACATTCTTATGTTTCAATCTACGCCATATGGTGCCCTCTCTTGAA
AAACGAACGCCCGAGTTTTCGTATCCTGTGCCAGCTTTTGGTAGAATCTT
GACTGCATATTTATTGCCACTCTCTCTTTCGATGCATCTATAGGTGTCAC
CGAATTGGCCTTTATACAAGAAAACCGACATGTCGTATACGTCGTCGAAA
TAAATTCCGTT Run BLAST on NCBI transcript from alignment at sc0000542:129201..144762+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025671 ID=TCONS_00025671|Name=TCONS_00025671|organism=Clytia hemisphaerica|type=transcript|length=15562bp|location=Sequence derived from alignment at sc0000542:129201..144762+ (Clytia hemisphaerica)
tcaGCCCATACTCCAAATACCTTAATCTTCATATCATATAGGACTTTTAG
TCTAAACTGTCAGCCGTGTACTGTAAGTTGGTATAAAATCCCTCTTTTTC
TAATTCCGACGCCCACCTTCAGTGTTGGTAGTTTAGTAAGCAGTATTGTT
TAAAAGTATTAATTCTTgcaaaaaatgaattaaaatgttacaaaaattaA
CACTCTTCAGAAAGATGGTCCCAAGAAGACTAATAAATTGTCCTGAAAAG
ACCAAAATAGGGTGGTTTCTGTGTCAAACTATGTCCCCAAAGACTTTCTT
TAGTGCATGttaaatagaataaaaaccaCTTCTCTATCTGAAGTAAAATG
GGGTGGTAGCATGCAAAAATTCTCTAAAACCTGTTTATTACTCATACaag
tctgagattttagtacaaCCCTGAATGAAAAGCAATGCGTAACAGTATct
gtttattattttcagtgaaaatttcgtaatttaaaataataactAAAATC
AACCATTCAAAGATGTCCTCACAGGTATATATCTTGattttcttgttatt
tttttttaaatgaaaataaggTTTGCATGAAGTGATTTGTAGAATTTACT
TGGTGGGTCAAAAAAAGTGTAACATATTATATTATATGGCTTAATAAAGA
CCAAATCATTAAAAACGGTTTATGATGTCCTTTTATTTTATGTCCGGGTT
GTGCTCAAACATTAATCTTCAAAGGTAGTTTTTCCAACTCTTATAATCAA
CCCTTACTAAAGGAATTCAGAGAAAATTCAGCTTTTGCATTAAATATTCC
ATTGAAAAAAGGACTTGGATAAATATTGTAGATATTTATTCTTTAGTAGT
TTGgttaaataaagttttgaattggTTAGATTTGATTCCTCAATGTTCTC
TATTATTCTATTATTCTATATTTGTTTAAATACTTTCAGAACCTCAACAA
CCACTTCCAAAATCTTTTATCCAAGTAAGTTGTGttgaatttcttcattt
tgactCTTAGTTTTGTCTGGTAAACTTCGATTAAGACATAATATATAATA
TCAACTACTCTTTTGAAtgagaaatttaattttaagatTCTATTTCTCTA
AATTTGCATCTTCCCAATtcgggctcttccagaaaatgtccgtacatgag
ggggggtggaggatataaaatTGTCCAGAGGATagcaaaaattatcaaaa
tttgccttgtccgggcaGTAAATTTGCGCTGTCCGGGGTCAATTTGAGTT
GTCTGGGGGGTCAACTCAtatttgtccaggggtaaaacctgttgtccggg
gggccaaatGTCACTTTGTCCTGGGTAAAttactgaaaattgttatatcc
tccaccccccatattcaaattttttttggaaaagcaaGCCCTTTGTTCTT
TACTGCTTTGAATTAAAGATTTAAGTTTTGATCATCTTTAAAATAGGAAT
CTAAATataattttaaagtctttcagGATGACCTTCGACAGCATTCTGAG
TTTTTTGTATGAAACCATATTTAGTATgtcttttaaaagaataaaaagtc
tGATTACGATATATACTGTCCCTCTTAGAATTATTATATTGATGTGGTTT
TTGTGGCAAAACACTAGGTAAAGTGTCCTTTCGCTGTCAATGGATGCCTT
CCTTTCTAGAATATAGTCTATAataattgttgttgttttttcagcATCGA
TGGAGGGTTAGCAATTCTGGTTACAGACAGGAGTGGAGTGCCAATAGTCA
AAGGTATATTGAGACAAAAACCCAAATGTGAATTTCTTATAACCTgtaca
aaaaatattgatttgtgCCAGAAATATTATTTCCACGCTTTTATAATCAA
GAGTATATCTAAGTTTCCTTAAAAACAATTATCATTTGATACAGTATGAC
TGGGGAATCATAGAAGTGTATATCTTTTCAAGTTCTACTTTAAATTTCTT
CTTGATAAAGAAGTTTCTTTCCTGCGTATACAcaggaaaaatttaattta
tgaacttttaaaaatgtttgtacaaaaatatctttgttaaaaaatatcta
acttgatttcatctccggaggggggggggtacttaggcaaaatgggtgcc
gggtatgtgcgagccataagggtaccttttNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtacaaattcaaaagttagtc
tctgaaagggtcccaaaatcacgaaaatctaaagtttctctctcaaaggg
tcacgatttccaaaaattttgacaaaaatttggtgaaaatcaaaccaaaa
tttggaattaAATGGACCAAATTATTaggaaaagtctctcaaagggtccc
aaaatcaccaaaattttgtctctcaaagggtcgattttcgattttcggct
cggacatacccgtcacctcgcaaacctagtacccccccgggtttCATCTT
ATTGAATTTCTTTCGTATTTGCACGTGTTAGTGTTATCAGGGAAATGTCC
AGAATCTGCGACCAGAGGGAGCTTCTTGTCCACCTTTGCTACTGCTACAG
AACAGGTTGGTTTTTGCTATGGTCTCTGTTTGTTCGTTTTTCTTATTAAT
AAGCCTTGCTTTGTGAAAagattggaaaattttggaaaattttcggaaaa
ttaacaagcgggggagGGCGTTTATTTTGAATCTAAGAGTAAGTTTttgt
ataaattatttttcacagTAGTACCTTTCACTTTTGAATATCTGTGGCTa
atgtttttctgttttttttcttcaggccAGTAAATTGGGTTTATCGAAGA
ACAAACGTATGATTTGTGTATATGAATCTTTTCAAGTAAGTATACACTGA
GCCCTGGAAGAATCTCTTCTCTATACTTTTCCTATAGACGTTTTTCGTGT
TTTCTTAAGTTAGTTCTgtcattatggaagcaaacgctCAAATCTGTAAA
GGGATccccttacgcaaatcgaacgcTTGCTTGGAGGTTGTTTATGTTTT
ATTAAGTTACCTAATTCCCGCCATCATGGaggcaaacgttcgaatttgta
GAGGTgatcccttacgcaaatcgaacccTTTACTTCCATAATGGTAGAAT
TTATGTTTACGCTTACCCCAAACCACTATAACCAGCAATAGCCACAGTTC
CCACCCCCAGCTGCTTTAGtctgagatttttcaaaaattttataggGGGA
GGAGTCTTGTAGTTTCCAATCTTAAGAGGGtgttaaacttaaaaaatgaa
GCGACTTCTTAGGTTATTTTGGTCAGTCATCATCTTTACGTGACTTTATC
AGCACCAAGAGGGGGTTGGTTATTTGAGGggttttaaagtatttttcgCT
AGCCTTTTATATTCAGAAAGGAAACCCCTACAAATAACAGcaccaaacaa
aaatttggttgaTTAATAAGAGAACATTAATCATATGATTGACACTTTTA
ATTCATTGATATTGTAGGTCGCATAGGAAAAGCAAGGAGTTTCTTATTGA
TATGCtgacgatttttttcttctttactttTAGGTAGTGATGTTCAACTA
TCTGCCGTTGGTTGTCACAATTATCACTAGCACAAACGCTAACACAGGTA
GGTctcattttgtattttattgtatCCCGTAGAATCCCGGAGAACCAAAT
TCTTTGATTCCTCTAGCTAGAGAGTTAAACTAGAATCTGTTTATGTATCT
GTCTGTCTCTGCTGCTCCTCAGTTGCTTAAATGCTAACACAAGTATCTCC
CATTCTGTACTTTTTAAGGACTCTTTGGGGAATTCTATCGAATCCCAGAc
aaccatttttttttaattgatcgGAGTGAAATTTTCTCTAGTTAAACCag
ggggggggtgaagcagttactacaagacatcatgccggttagtaccgtgg
tggtgtgccatatgaattggataaaatcacttagtactcaaatgtactaa
ctgcaaaaaagggtggtcccctgctaaaaatttgccaaattttggtacta
actgtgtaaaaaataggattttgtgagaaaatttaaaaaaaagacaatat
tttaccaaaaaagattttggggaagtagattttttttttcaaattttcga
atttttttttttaatcttaaaaaCAACTAGCCGTTAGCGCAGCGTCACAC
GCTGCGGGTCCGAGACGAGTGAATGTCGTGTTTATGGTTAATTTCGGGGA
AAGTAAACATTATTTTTCAAGGGTAATGTGATCTAGGTGGAATTGACAAA
GAGCAAAATTCCTTCGATGAAGGACGATTTAGTAACCTGAAGCCATTTGA
TTTGgcacattttgaaataaatttcaataaaaagcAGAGAAGGCTAAAAG
AGTACCTAAAATCTATCATAAACGTTAACTTTAGTTCCTAATTAGGCCGT
AGAAAAGTATCGTAAAAAGGACACAATAATTCTGCGAAACCTCTAGAGTG
CTCCTAGacagatagatagatagatagatagttTTTGAGTGACGCCGAAA
GTTTACTCTTGATTAATAGGTACCCAACTCTTTCCCGGACAAGATTTAAG
GACTATCGGTTATGTACTTTTGGCAGGGTTTTTCAAAACGGGAAGTCcat
gagaaaatttttcaaagggaCAAAACATATCAAGTTACGTAAAGCTTTGT
TTGTCAAGGAGAAGAGAATAGCATGAATTGCTTTAAAAGAAGGCTGCCAC
AGATCTTAAAGAAGTTTTAAATGGAATGCAACATATTTACAGTAATTTGA
GTGAGTTTTATCTTTTGTCAAGAATGTAATAAATTCGGATACAACATAAA
TTGGCTAtagaaactttaaaaaactaaCATCCACCATGTTGTTTCATGTC
GAAAGACTCGAGCAgtaaatgattgaaaaaaatgaaagttgatGCGAGCG
ACTACCATGTACCACTGTGGTTGGCAGCATGACTGTAATTTTCCAATGGT
ACTGAAATGATCGCGAAATGATCGCGAATGTCTTTTGCCTTTTGTGGCCA
ACTCATGGCAAAGTATGAGCTTTTAATATCACTCAGCCAGTTGAAATCGA
TGTCTACATCTCGTCTTTAGTTGCCGATTATGTACTCGTCTGTGATTGAT
GAGCCTCGTGACGTCATGCGAGCCAAAGCGTTGTACTAAAAATAAACAGT
AAAATTTGTATGCGCTGCAAGGGAAATGAGAAAGGGGAAGTGATATATTT
GGCAAGTATGAAAGGATGAGACTTGggaaatgcaaaattaaaatcttcta
ACTGTTACTTCGACCAAAGATTTAGATGTAGTTTACTTGTACTGAATAGA
AGTAATAAGGTTGCAAAAGTAAAGTAACTTACATTCCAAAGTGATGATTG
GCGATTCCAATCACTATCCGCTTTGTGTGTTGGTATAGTTGAATCACATG
ATTGGTATAAGTTGAGTCATTTTAAAATACACAACATTTTTAATAACTGA
AACACGAAAGTGAATAATGAAAAGGTAGAATAGATACAAAATATTATAGA
TACACATACACACAAACCCAACAATTACGCAAACCCCGATTCTTGATAGC
TTGGAACCCTTAAACTTCAAACTAtcaataaaatgaaagaaacactGAAT
CCTCCACAGAAGAGGTAATAATGTAACACGACAGAAATTCTGTTATTTCA
AAAGCTCAAAGACCAGTCTATACAAGACCACTACTCACAGAGTAGTTCCA
CACTGACATCTTAACAGAGCAAATGGAAGTGTAACAGAGCATATAAAGTC
TATAGAAAGTTATAGAATTTGTGGGTAGACTACATTCTTAGTAAGACACT
TCCCATTTTTGTACCCTTGACCATGGGATTTAGAGACAACCAACCTAACA
CTCTGAAAAGAACGTGTACGTGAGAAAGCAACGTACAATTGGCCGTGAGC
AAAGCAAGGTCTTGCAAGTGAGATTCCAACCTTGTCATAGGTCTGTCCTT
GACTTTTGTTGATTGTCACAGCATAGGCGTACCGGAAATTGGACCCTTTT
TAGCTGAAATGGAAGATTGGTGTCATTGGGACAAAAAGTTATTCTTGGAA
TCAAAGTTCTCGCCCCAGCGGAAAATCCGGACAGAATCTCTGCATCAATC
AGGTTATTTTGTAAACGACAGACTTTCAGACGTGTTCCATTACAAAGGCC
GTCCTTCAATGACAAATTTCTCAATAGCATTATTATAGATCCCTCTTTTA
AATTTAGTCTATGCTTTGGCTTCCCACTTGGTGTGAGCGAATGGAGAAAC
TCTAGTGGATAAAGATCAACTTCTTCTTGGGTGTCAGCCATCACAGAATC
AAAACTAAAGTATGTGCGAACATCACCGCCTAAACATCTTAGAATTTTCT
CATTGATCTCCAATGCTTCATTATTAGTTGGCGTCAATATTACCTTAGTT
GATTGATCATTGTCGTtttggaaattgaatatatgtGGGACCAAATCGGA
GTTCTCGGGTAACACACATTCATCAGGAATTTGGATACATCCTTTAAAAG
GATCATCTGGTTTCGCCGGAAGTGCGCCGGCACCAAGACGAAGTAAGAAC
TCAGAAAATTCTTGTTCTCCAGGCCCTGTCTTCATGTTTGTACGGAGATA
GAATGTTCTAACCAATGCCCAGATGTAGCTACTTTTGAGACATGTTTCTA
CAACCTGTGCCGCAGTGCCTCTCTTAACCACAGGAAGTGTCTGGCGAAAA
TCACCGCCCAGCAAAATAACCTTTCCAGCAAAAGCAACATCACTATTACT
TATATCTCTCAGCATTCGGTCAATAGCTTCTAAAGCATACTTAGAAATCA
TAGAAGCttcatcaaaaatgaaaatgtgcTGGCTTCTCAAAAAGTCAGCA
TGTTTGCTCGTTGGTTTTACATTACATGAACAACCATCATTGACTGGTAC
TGGAAGCTTGAATAAATTATGACAAGTCTTACCACCATCGAGTAGAGTCG
CTGCAATCCCTGTCCAAGAAGAAGTTGCAACACAGAAGGATCGAGCTCTA
GCCTCTTTGATGATGTAATTATATGTGAATGTTTTCCCTGTACCTCCTGG
GCCATCAAGAAAAAACACTTTAGAAGTACCAATATCATTCACAGCAAGAG
AATCAAGCACAGTGTCAGAAATGTTGATTTGCTGAGGATTTAACAGCGGT
CTAATCCTGTCTGCCGCCTGCCTATTCTCTTGAACATTAGGTTCTTCATC
GAGCAAATCAATATTCAAAGGAGGCAGATTAAAATCCACCAAGGCTTTAC
CAGCATCTTCTAAAGTCCTCAGTAGGTAAGCTAAAACCAGCTGTTCAGCA
TGCAATGCATCGTGATACCTCAAAAAGTCTTCCATCATGTACCCCTTGAA
TGATTCCCACAATTCATTTGGGTTATTTGGCCCGCCATGAATAAGTATTg
tagaaaaagtttttctaaTCTTAGCTGGAGAAGAAACATGGACAACTTCA
TCAAGGGTATTGACCCAAATGTTGTCATCCTCCAGAAGACCTCGAGCTAA
ACAGGCTTCCCTGAAAGATTCAAAGATCTGACCATCATAGGTtctcaaat
cttcaaaagaCGTAGCTCCTGGAACATGAAGCAATAAAACTCTCAAAAAG
TATCTTTCTCCTTCCCGGAGGCTGGCACTATACATTCTAGGGATGACTGT
ACCACGTTGTCTAACTTTCCACTTTGATGTGGCTTTGACGAAAACATAAT
TGTTTGGAATATCAGGATAGAAAATAGTCCTTGCAGTTGGGTCTTCTTGG
TTCAATTTAAACCAAGCTGTCAACATGGTGTCNTAAAATAGTCATTGCAG
TTCGGTCTTCTTGGTTCAATTTAAACCAAGCTGTCAACATGGTGTCCTTG
TTTTGAGCTCTCTCTACAGCACCTTCCTCGCCTCCAGGTTGAAAATAAAC
CCTTTGGAAGTTTGGTAAATGTACAGCAAGCCTTGTGATGATGTGCGTTT
GGGTGTGCATGTTGAAGCTAAACAAACGCCAACATGCTTCCGGTGCAGAC
ACATAGCGTGCATCAAGGAaagttttgatttcatcgtgatCAATTCTTTC
AGCGATTTCAATGTGGGCTGAGTCGTGTTCCTTATAGATGTACTTGTATA
AATACTTAACCGCCTTGATGGAAACACAGGCCTCCAAGTTAATGTGTGCA
TTGAACCTTTTACTCAGATATGGATTGTATGGTACAACTGATCGGTTGTC
AAGATCAAAATTTCGAACACGCACAGTTCGACCATCATCAGGTCGGTAGT
AGTGAGGAAAACCATCAACATTAAGGAGCGTACGATCATTGAAACATTTT
GGGTAGTTTTTAGAACAACTACCATCCACCATACAAGGACATTGAGGATT
GAGGGCACCACATGGCCCATGAatcatgtttgttttgattatctCGTATA
GTTCAGGCTCAGTTTCAATATCAGGAATCCTTGCACAAATTAAAGCATCA
ATGTCATCAGCATTTCTTAGTTTAAACTCAGGAGTGAAATGCAAGAGCAT
GTGGCAATGTGGCAGGCCTCTTTTCTGAAATTCTATGACATCGACACGTG
CCACAACCCTACCAAGAACACAATCTTccattatttcttttttcaaagca
TAAAGCTTACAGCGAAAAACACGACAAACTAAATCAGGCCTATCCTTGGT
TGTTTGTTGAGGTAACAAATTGTCAGTGATTTCCTTCCACCTCGGATTAC
AAGTAAAAGTTAGGAAGCAATCAGGTCTACCATACTTTGCAACCACAGCC
ATTGCATCCAAATAGAGCTGGTGCATTGCTCGAGGGGACCCAAGGAAAGT
AGAAGGGAGAACAATAACATTTCCTGCATTCAAGTTCCGCTGGCCAGCAG
CATTTTCAAGGTAATCCATAAGGCCACTATACGAATCAGCCCTTAGATTC
TTTTGATTAAAACGGATGTACTGTAACCTACACCCCTCAACTCGGGTGTA
CGCATCTACAAGAAACTGCTGAAAAAAAATAACCAGACAAATGGAGTGCA
GAGAATTCTTGACGAATAGCCAATCTATAAGCAAAATGTTCAAGCATAGT
CACACGATTTCTAACATTTGTAGCTCGCTCTGCAGCTTGACTCATATTCA
TATCCCAGCCAATATCCCCTCTAGGGTAAATCAAAGGATAAATCATAGGA
TCTATGTTAGAAGAAGTCAACGGCAATCTTTGAAGAGGCTCGTTGTGTGG
GTATACCACAATTACTCGGTTTGCAGGAGGAGCACCGCCCTCCCCTGTGA
AAACTATTGAAACCTGTTCATGCAATGGGGCATTATACCTTCTATTGTCA
TGACCTTCAACCATTCTCATTGTTACTCGTGATACAGGCCGATTTTGTTG
TTGTGCTAATGCGTTCTCCTGCTCCTCAACTACTTTCATATACTTGTAAG
ATGCAGCAAAAGGATTAACATCGTCAAGAACACTCTGTAAGATAGCCATA
ATTTCGCGATCACAATCTGCAGCAGATGGGTTCTGCATCCGTAAGTTCAA
AGCATTCCCTGTCTCAATGATATAAAGCTGAGCATACTGTGGCCGGTGTG
CTTGTTCTGGGAATAGACTACCATATCTATGTACAATTTGTCCACATATT
CTAAAAGTAGGTGGACCCCGACCAGAAGGAGGTGCAATATTGGCAGAAAG
AGAAGCGAAAGCAAAACAGTTATTGTAGAGTCGAATCTTATCTCTAAACT
TCTTAGCTTGGTTTGAAACTCCTGTAAAAAGTTGGTGAAGCTGAGGTGGA
AAAGGTCGCAGCGGGGGAAGCNAGTTCAAAGCATTCCCTGCCTCAATGAT
ATAAAGCTGAGCATACTGTGGCCGGTGTGCTTGTTCTGGGAATAGACTAC
CATATCTATGTACAATTTGTCCACATATTCTAAAAGTAGGTGGACCCCGA
CCAGAAGGAGGTGCAATATTGGCAGAAAGAGAAGCGAAAGCAAAACAGTT
ATTGTAGAGTCGAATCTTATCTCTAAACTTCTTAGCTTGGTTTGAAACTC
CTGTAAAAAGTTGGTGAAGCTGAGGTGGAAAAGGTCGCAGTGGAGGAAGT
ACAACTTTTCCATTTGAGCAACACTTAAAATCATTTTCCCCCTCAAATTT
TAATGCCCCACAAAAAGTACAAAGCTGATCAAATTCACCTAAAGAATGTT
CCTCAGGAAGGAAGGCAGTAGGTGCTATGCCTAAAATACGAGTCCGTCGC
TGTTGGGCTCTTTGGTAAGCATTTTGATGCCATCCAGCAGGCCTGTTTGC
ATTTACATCAGTCCTTCGTTCCCTTTCACGTTGGGAGTTCTGAGCGACCT
TCTTTCATTGGATTCTTCCTCAGTTTCATTTGCACGCTGGACCCGCATTC
GTGCAGCATTTCTCTGTCGGCGTGCTTGTGCTTGTTGTTCTGTTTCACCT
TGCCTTGGATTTCTGATGGTATTTCCAAGCCTGCTAGTTTCACCCTGTCC
TCTGCCTCTATCTTGACCCCTTGCTCTACCTCTGCCCACACCTCGTCCAC
TACCTCTGCCCAAACCTCGTCCTCTGCCTCTACCTTCACCTCGTCCTCTG
CCCTCACCTCGTACTGTGCCTCTTCTTTCAACTCTTCCTCGGGCTCTACC
TCTTGGCGGCAAATTATCATTCAAAGGAGCCAAATTCTCGCTATCGTCTA
AGTTCTCCATCATGGTCAAAATAAATTAGCAACAATCAATTTTAATcaat
tcttaaaaaatatcAAGTTCAAAGGCCAGTGGAATTGTTTATCTGGATAA
AGGAAGATAGATGGATAAGATGTTGAGAAGAGAGTAATTCGATTCTCAAA
TCAAAGTCAAATGCAATGATAGAATTTGCATGGCGATACCAAACCAAAGG
ATACAAACGGTGAAAGATAATAAATAAATGGTAGCATGACTATAtgcata
aaaatgttcgatgCAATTCAATGTTAatcaattcttaaaaaaacatcaaG
TTCAAAGGTCAGTGGCAGATGATGGAATTTGCATGGAGATACAAACCCAA
AGGATACAAACGGTGAAAgataataaataaattgaaGCACGACTAATGCA
TAAAAATTTATGATGCAGTTTAATGTAGTTACTGACTCAAAAATCTATAC
TATAAAATATAAACAGCTTACATTGTATTggtaaaaaaagagaaatatgg
GTAGGACTAAAAGTTAAATTCCAGAAAGCAAACCGATCTTAAAAGCCAAA
CTTTAAAGTATCAAATTTATATATTCTTATAGCTAACAATAGCACTATAG
CAatcttcaaaattaaagataCCTTCTTCACTGACTATGCTCAATCggtc
aattttgaaactgaCCGAAAAGAGACCTATCCCTTGAAGCATTccatatt
tgaaagaaaaagacgGGGGTTAAAGAAAATGAGAAACCGCCTAAAGCCAT
GCACATTATCGACACTCTAAACCCCCCGAAATTGTTGCGAAAAGATGTAT
ACTAAAGGCCTATTTACATCTATTCATTACGGTTTAAAAGACCGTGTAAA
ACGGACTTAAGATTGTAAGGGCTATTTTAGATTGGAGAAAAACAATCCTT
TTCACGGaccaaataaagaaaatgacaaTGTAGAAAGGCCCATATTGCCG
ATTGAAGCCAAAAACAATCCGTTTGacgatcaaaacaaaaaattaatatt
gtaaacacacacgaataagcgtattaatatatagatttgctggttgcaat
agaaatttgaaggtcaaaagcctttttcaaggctaatttcagttagtact
aactgtactaagtgtaccaaggtggtggtgttactaacttcttccgagaa
agcagttagtaggcatgatgtcttgtactaactgcttcacccccccccct
ggttaaACTAGAATCTGAGATGTATGTGTATCTGTTTGTTTGTTTCCTGA
AAACTTTAGACCGGAAACTTACcgaaaatggtcggatttggctcccaaaa
gattttgtagacctgtctgtttttttttttcattttttgaaaattttgat
tttggggaCTTGGGATGAGTTAGCTAAAACTTGGTGGTGGCAgcctgaag
gcttcaaaatttttcgattcCGCCTTCAATTCATTGGAAGCAGACAGAAA
TTCGTTGGTCTGAGTTATGGCTTTTTAGCAGATTTAACTCTATGGATGAT
TTTATTTCCCTCTGCTATCTAATCCTTATTATTGTCTCTTTAGGATTGGT
GCTGGATTTAGAAAGAGACATTTCGCCTGTATTGGATAAATTGAAGTCGC
ACGTCAGAAACTGATGAAACGTACTTTTTCTAAACATaggtatttcaatt
ttttatatgatACCAATACAGGGGCCTGTGAGTATTCGGCTTTATGTTTG
TAAATAGTTCATTTCACATGTTGGCATTGTCGGGTCTCAAACTCTTTGAA
ACCCTCACCTATCCAAAATTTGGTGGCTTTAGAACTTTTTATTGCTTATA
GAGTCAATTTCTAAAGGGCTACAAACACTAAACAATATATTGCCAGACAA
TTATTGCCAGCTCCATTTGCAATATTCCAGCCATATAAGGGATCGCTTAa
cttacaaaaagaaaataccTTATTATTTCAAAGAGCACCTGCCGTTTACA
GTACTTACGACCGTAACATTTATTGTTGAATATTGATCACCAATACATCT
TGTAGTCTAAGTAACCATTAACAGACTTAGATATTCTTTCAAAATGTGTA
CCCTTGTTTAAAGACCCGTTTTTTAGGTCTCATCGGTAGCCACCTTCAAA
CAAAACAATGTCATTGCCACTAAAAAGGTTTAtgttattttggtattttt
ttggtataatatTTCTAGCattatataaaaagataatcacCATTTGAAAT
ACTTGATCAAAAATACagtagctctagtttagacagcTCTACTATCCAAA
atcaatgtcttctgacatcaATGAATGCAAAGACTTCTCTTTTCAAAGCA
AGTATTTTAACTGCCAATTTTTTGGCCACTTTTCGCCTATCAATTGGAAA
AGGCGGGCGGAGTCGGCTGTTTAAACTGGAGCTTAAAGTTGATGTATTTC
TTTGAAGCACTTGTTAACACTAAAATCACTTACTATGAAATTGCCTCTTT
TTGAAAGTTTAGCTACATTCAAGAATCTAGCTCGTGAAAATCTAAACATC
ATATCTAAATCACAGCTTGCTCCTCCATTTAGACAATATAATTTTAATAA
GAAAGAATTTTGTATTAATTTATTGTACTAATAATGTTTCGAACTGAATT
CCATTTCAAATTATTCACTTTACAAAATCaatatcaataaaaaaatattt
ttattatcaTGTTAAAAAACGAATTTGTTCATTTCTTGTCCTTGAagttt
ttaatttacaagctttttttataagaatagtgtgagggtgagggtcaagt
attcttaagaaatttccaaaatagagggtgaaatattcttaacgcaTTCT
TACTTTTTTACACTTGACTTTTATACGAACATgataaatgatcaatttga
aaGTTTAAGACTCTTTAGTGCACATTGGGAGCTAAGATTATATTTCTGCC
TCGAAGTTTCAATTTAAGTCTAacgaaagaaaagtttttcctGTAAGCCA
AATaaaatgaatgtatttttatCAACATTTGTGAAACTCACCCTTGAGGG
TAAGGGTGAGTGGGGTATTTTtggggtattcttacgatttgaccaatttt
caccctgatattcttataaacgatattcatataaaaaaaagcgtgtatat
acTTTCACTCAAAAAGCTAAAGAGAAAGTTTTTTCCACAAAAATATActt
tctttcaaagcaagtcCTTGCTTGGAAAATTTCGTTTTTACTTACTGTCA
TTGAAACAATATAGTTTCATAAATTAAGCAAATCTAAATAAAATTAGGGT
TTTCTTTTACATCTTTATAAATTTCACTCTGCATAAAAAATATTCATctt
aaataagtttttttttcattcgtGTGTTTCTGTCGAGTCCTTGAGAGATA
TAATTTTATTATGATATATTCAATGTTTTTCCAATGcattttttcagata
tttttatACTTTCAAGTAGTAAATGGATGGTCCAGTGAAAGCTATTAAAC
TATTGAAACAGAAGTTAATTCTGCAGTGTTTCTGAAAGTTCCTGTGAATA
TTCGCATTTTTTTATACCAACCAAActgaaccaaacagtttttccaATTT
CCAATTTCAGTCTGGTCAAGTGCTTGCTGATCTTGTAGGTCATACATTGG
CTTCAAATCACTCAAATCATAATGAATTTATTTATAACTGGTATTCAAAT
TCACGAATAAATTCTTGGGTTGAAACTGGACACATACTTTGGCTTTGTTT
GTGTTGGTGCATAAATCAACAGTTTTGGTCTTACTAATAACTGTCATTCT
GCGTTTTTCTTCATCCCCGCTCACCAGGAAGTTCTGTCTCTTTTCCTcct
caaacattttctttcgcCTCATTCCTCCAAAACTTTGAATAAGCGAggtt
ttgttattgttttgatctTGCGCTCGTTTCCCTTCACCTGAGAACACAGT
TTGAATTGTGAACATTGTGTTTCGTGCTTTTCGGCGGCCGTTCAATTCTT
TGAGTTTGTCGATTGTTTTGAATTTGTGGTCGCGTGGTGCGACATTGTTC
TCTTTAAACCAATCATGAGCAAGTGCTTTGTCAGCATTTAGCCTTGTGTT
CATATTTTTATCCAGGAGTTTCTCTAACAAATCTTTAGCTTCATTTGACA
CGCCATTCCATAAGGCGGAAGACAAATCAGCTGGGCGTGTTAAGATGTCT
CCGTACATGACTTCTAGACGATCGTTCCAAAATGGCGGATATCCAACTAA
TAGGATGTAGAGAACAACGCCTGCCGCCCATGTATCAACACCATAGTTGA
TTGGGTGTTCTAGAATAACTTCGGGAGCTAAAAACAATGGCATTCCTTGA
GGTTCAACTTTGGTATACTTCTGACCTCGTTCCAACCTCAAAGAGAGGCT
GAAATCACCAATCTTTAAAACTTCTCCGTAGTCACTTTGTTTAAGCCAGA
TATTTTCTGTTGTTAAGCAACGGTGCACGACGCGCCGTTTACGTAAATAT
GACAACCCTTCGAATAATTGCTTCATGAAGAAGGCTGCATCACGCTCTGT
GTAGGTCGTATAACTTGGCAATTGGTCAAACAGTTTACCATCTTTAACGA
ATTCGGTCACTAAGAACTGCTCTTTGGGCGTATTGAAAATTCGAACCAAT
TCTATCACATTCTTATGTTTCAATCTACGCCATATGGTGCCCTCTCTTGA
AAAACGAACGCCCGAGTTTTCGTATCCTGTGCCAGCTTTTGGTAGAATCT
TGACTGCATATTTATTGCCACTCTCTCTTTCGATGCATCTATAGGTGTCA
CCGAATTGGCCTTTATACAAGAAAACCGACATGTCGTATACGTCGTCGAA
ATAAATTCCGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025671-exon-sc0000542-1491911889:129201..129724 | TCONS_00025671-exon-sc0000542-1491911889:129201..129724 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1510915933:129201..129724 | TCONS_00025671-exon-sc0000542-1510915933:129201..129724 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1575043694:129201..129724 | TCONS_00025671-exon-sc0000542-1575043694:129201..129724 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1491911889:130140..130174 | TCONS_00025671-exon-sc0000542-1491911889:130140..130174 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1510915933:130140..130174 | TCONS_00025671-exon-sc0000542-1510915933:130140..130174 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1575043694:130140..130174 | TCONS_00025671-exon-sc0000542-1575043694:130140..130174 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1491911889:130895..130953 | TCONS_00025671-exon-sc0000542-1491911889:130895..130953 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1510915933:130895..130953 | TCONS_00025671-exon-sc0000542-1510915933:130895..130953 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1575043694:130895..130953 | TCONS_00025671-exon-sc0000542-1575043694:130895..130953 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1491911889:131782..131855 | TCONS_00025671-exon-sc0000542-1491911889:131782..131855 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1510915933:131782..131855 | TCONS_00025671-exon-sc0000542-1510915933:131782..131855 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1575043694:131782..131855 | TCONS_00025671-exon-sc0000542-1575043694:131782..131855 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1491911889:132076..132135 | TCONS_00025671-exon-sc0000542-1491911889:132076..132135 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1510915933:132076..132135 | TCONS_00025671-exon-sc0000542-1510915933:132076..132135 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1575043694:132076..132135 | TCONS_00025671-exon-sc0000542-1575043694:132076..132135 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1491911889:132834..132897 | TCONS_00025671-exon-sc0000542-1491911889:132834..132897 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1510915933:132834..132897 | TCONS_00025671-exon-sc0000542-1510915933:132834..132897 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1575043694:132834..132897 | TCONS_00025671-exon-sc0000542-1575043694:132834..132897 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1491911889:141494..141589 | TCONS_00025671-exon-sc0000542-1491911889:141494..141589 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1510915933:141494..141589 | TCONS_00025671-exon-sc0000542-1510915933:141494..141589 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1575043694:141494..141589 | TCONS_00025671-exon-sc0000542-1575043694:141494..141589 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1491911889:142014..144762 | TCONS_00025671-exon-sc0000542-1491911889:142014..144762 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1510915933:142014..144762 | TCONS_00025671-exon-sc0000542-1510915933:142014..144762 | Clytia hemisphaerica | exon |
| TCONS_00025671-exon-sc0000542-1575043694:142014..144762 | TCONS_00025671-exon-sc0000542-1575043694:142014..144762 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000542 | supercontig | sc0000542:129201..144762 + |
Blast
BLAST of TCONS_00025671 vs. Swiss-Prot (Human)
Match: KCC2G (Calcium/calmodulin-dependent protein kinase type II subunit gamma OS=Homo sapiens GN=CAMK2G PE=1 SV=3) HSP 1 Score: 184.111 bits (466), Expect = 1.512e-48 Identity = 117/368 (31.79%), Postives = 191/368 (51.90%), Query Frame = -1
Query: 2567 FDDVYDMSVFLYKGQFGDTYRCIERESGNKYAVKILPKAGTGYENSGVRFSREGTIWRRLKHKNVIELVRIFNTPKEQFLVTEFVKDGKLFDQLPSYTTYTERDAAFFMKQLFEGLSYLRKRRVVHRCLTTENIWLKQSDYGEVLKIGDFSLSLRLERGQKYTKVEPQGMPLFLAPEVILEHPINYGVDTWAAGVVLYILLVGYPPFWNDRLEVMYGDILTRPADLSSALWNGVSNEAXXXXXXXXXKNMNTRLNADKALAHDWF-KENNVAPRDHKFKTIDKLKELNGRRKARNTMFTIQTVFSGEGKRAQDQNNNKTSLIQSFGGMRRKK------MFEEEKRQNFLVSGDEEKRRMTVISKTKTV 3649
F D Y + L KG F RC+++ S +YA KI+ + + RE I R LKH N++ L + +LV + V G+LF+ + + Y+E DA+ + Q+ E ++++ + +VHR L EN+ L G +K+ DF L++ ++ G++ G P +L+PEV+ + P VD WA GV+LYILLVGYPPFW++ +Y I D S W+ V+ EAK+L+ ++L N R+ AD+AL H W + + VA H+ +T++ L++ N RRK + + T V S A+ N K S GG++++K + + +N LVS +E + + +T
Sbjct: 10 FTDDYQLFEELGKGAFSVVRRCVKKTSTQEYAAKIINTKKLSARDHQ-KLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ-GEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTMLV-SRNFSAAKSLLNKK-----SDGGVKKRKSSSSVHLMPQSNNKNSLVSPAQEPAPLQTAMEPQTT 369
The following BLAST results are available for this feature:
|
