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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025676 ID=TCONS_00025676|Name=TCONS_00025676|organism=Clytia hemisphaerica|type=transcript|length=317bp
GCAAGAATTGGAGAGTTATGGTATAGAGACCTTGGTGTTGGAAGCCGATA
CAGTTAGGACTAGAAGAAAAGCGAACCATATTATGACATATGGTAGCGAC
GCGGCTTTGGATTTTTCCGACGGACATACGGATTTGGACTGGGACTTTGC
ATCTTTCATTAATGGTTTGTCTGCTGAAGATAGGGCTTCAAAATCAGAGC
GAAACGAAGTTGCAAAGCTTTTGAACAAGAAGTTTAGCTCATTGAAAACA
AGTCGAAAACGAGTCCCGTACAAGAGGATATGCAACGGTTCAGTGCAGGT
TGTTGGCCTGCCCGAAG Run BLAST on NCBI transcript from alignment at sc0000542:158563..159357+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025676 ID=TCONS_00025676|Name=TCONS_00025676|organism=Clytia hemisphaerica|type=transcript|length=795bp|location=Sequence derived from alignment at sc0000542:158563..159357+ (Clytia hemisphaerica)
GCAAGAATTGGAGAGTTATGGTATAGAGACCTTGGTGTTGGAAGCCGATA
CAGTTAGGACTAGAAGAAAAGCGAACCATATTATGACATATGGTAGCGAC
GCGGCTTTGGATTTTTCCGACGGACATACGGATTTGGACTGGGACTTTGC
ATCTTTCATTAATGGTTTGTACCATTATACAAATCAATTGATTATTCATT
ACAGTATTACTAACACTTTTTTATATTCCAGCCTTGAACTCAGTTTATTT
CTTTGTAATGAATTacaattttctatatttttccaGGTTTGTCTGCTGAA
GATAGGGCTTCAAAATCAGAGCGAAACGAAGTTGCAAAGCTTTTGAACAA
GAAGTTTAGTAAGTTATNTCGGAATGATAAGAATGGGCAGCgtgaatttc
aaatcaaatggaTAGGGTATGCGGAAAAAACTTGGGTGGATGAAGGCTCA
CTTGACCAGCACGTGATTAATAACTATCTTAGTTCCTTGTAATTATGTTG
TTAATATActaactttttactttttatgagTCTTCTTCATTTATCGCTTT
gtcatttttcatatttgtcACGTATACCAGGTGTCCTGAAAAAAGTTACT
GTGCTGAAATTTGCTATCATGTGAATAAATNAAAgctattttcaatgttt
ttttttcaaataggtTGAATTTATACTTGgattgatttttgtgatttcaa
TAATAACATTTTAGGCTCATTGAAAACAAGTCGAAAACGAGTCCCGTACA
AGAGGATATGCAACGGTTCAGTGCAGGTTGTTGGCCTGCCCGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025676-exon-sc0000542-1491911889:158563..158726 | TCONS_00025676-exon-sc0000542-1491911889:158563..158726 | Clytia hemisphaerica | exon |
| TCONS_00025676-exon-sc0000542-1510915933:158563..158726 | TCONS_00025676-exon-sc0000542-1510915933:158563..158726 | Clytia hemisphaerica | exon |
| TCONS_00025676-exon-sc0000542-1575043694:158563..158726 | TCONS_00025676-exon-sc0000542-1575043694:158563..158726 | Clytia hemisphaerica | exon |
| TCONS_00025676-exon-sc0000542-1491911889:158849..158920 | TCONS_00025676-exon-sc0000542-1491911889:158849..158920 | Clytia hemisphaerica | exon |
| TCONS_00025676-exon-sc0000542-1510915933:158849..158920 | TCONS_00025676-exon-sc0000542-1510915933:158849..158920 | Clytia hemisphaerica | exon |
| TCONS_00025676-exon-sc0000542-1575043694:158849..158920 | TCONS_00025676-exon-sc0000542-1575043694:158849..158920 | Clytia hemisphaerica | exon |
| TCONS_00025676-exon-sc0000542-1491911889:159277..159357 | TCONS_00025676-exon-sc0000542-1491911889:159277..159357 | Clytia hemisphaerica | exon |
| TCONS_00025676-exon-sc0000542-1510915933:159277..159357 | TCONS_00025676-exon-sc0000542-1510915933:159277..159357 | Clytia hemisphaerica | exon |
| TCONS_00025676-exon-sc0000542-1575043694:159277..159357 | TCONS_00025676-exon-sc0000542-1575043694:159277..159357 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000542 | supercontig | sc0000542:158563..159357 + |
Blast
The following BLAST results are available for this feature:
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