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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025688 ID=TCONS_00025688|Name=TCONS_00025688|organism=Clytia hemisphaerica|type=transcript|length=950bp
ttgatCTTTCAACCTACCTGACATACCAGTAAAACAAGTACTTGGAATCC
TTTCataatttctttaaaagaaGGAATACCTTTTGCACGCCTTTCACATG
CACCAGTAAGACTTGTTTCCATTTGAATTCTTATTTATTACATCTCATAT
TTTACTTACAGACAACCGGTAAGGTACCAGTTTTTGCCCTGTCAAGCAGT
TCCATCttgaaaatttattattatCAGCAGTCTTTTCACTCACTGGCTAC
CAGAACAggttttttgtttgaatttttgagaGCGATGTTAATATTTCTCT
GACATCTCATACATTACTTACACCCAACCAGTAGTATACCAGTTTTCTTT
CTTGCACACACAGCTCTTAGCTTGAAAATCTGTTACTCTCAGCTATCAGT
TATTACCACTCACTGGTTAGAGGAACCGGTTTTTTGCTGTAACCTTTTAG
AATTTTATTTGAGAGAGATGTCAATATTCCATGTAATGTACAATTGTAAT
CGAATTTCCAGATTAGCAAGACAAATTTAATTAGAAATTATATGACCACC
TTGTGACCTTAGATCATCCACATTAACAGGAGAAACTTAATTAGAAAATT
AATCTATGAGCGCCTTGTGACCTTAGATCAAAAGATGGgacatttttgtt
aaattttttcgcAGAACCCAAATATAGTACCTTATAAACCATTTATCAGA
GTGGGTTTTAGTATGTTTATGGTTTTAGgcaataatttgaatttttgcat
CTGACTCTAGTACacgtttcctttttttttgcgacccagctgacacacaa
cgctgtttcaacgttcatctaacgttatatggacgttaaataaacgttgg
gGAGATAGGAAATGAAAAGTTTCCAGCCTTAGGCAAAATAAACTAAATTT
GTTGCTCTAcaggcccgaccgaccctgatttaactggaagttttgaaaaa Run BLAST on NCBI transcript from alignment at sc0000542:65178..66127 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025688 ID=TCONS_00025688|Name=TCONS_00025688|organism=Clytia hemisphaerica|type=transcript|length=950bp|location=Sequence derived from alignment at sc0000542:65178..66127 (Clytia hemisphaerica)
tttttcaaaacttccagttaaatcagggtcggtcgggcctgTAGAGCAAC
AAATTTAGTTTATTTTGCCTAAGGCTGGAAACTTTTCATTTCCTATCTCc
ccaacgtttatttaacgtccatataacgttagatgaacgttgaaacagcg
ttgtgtgtcagctgggtcgcaaaaaaaaaggaaacgtGTACTAGAGTCAG
atgcaaaaattcaaattattgcCTAAAACCATAAACATACTAAAACCCAC
TCTGATAAATGGTTTATAAGGTACTATATTTGGGTTCTgcgaaaaaattt
aacaaaaatgtcCCATCTTTTGATCTAAGGTCACAAGGCGCTCATAGATT
AATTTTCTAATTAAGTTTCTCCTGTTAATGTGGATGATCTAAGGTCACAA
GGTGGTCATATAATTTCTAATTAAATTTGTCTTGCTAATCTGGAAATTCG
ATTACAATTGTACATTACATGGAATATTGACATCTCTCTCAAATAAAATT
CTAAAAGGTTACAGCAAAAAACCGGTTCCTCTAACCAGTGAGTGGTAATA
ACTGATAGCTGAGAGTAACAGATTTTCAAGCTAAGAGCTGTGTGTGCAAG
AAAGAAAACTGGTATACTACTGGTTGGGTGTAAGTAATGTATGAGATGTC
AGAGAAATATTAACATCGCtctcaaaaattcaaacaaaaaaccTGTTCTG
GTAGCCAGTGAGTGAAAAGACTGCTGataataataaattttcaaGATGGA
ACTGCTTGACAGGGCAAAAACTGGTACCTTACCGGTTGTCTGTAAGTAAA
ATATGAGATGTAATAAATAAGAATTCAAATGGAAACAAGTCTTACTGGTG
CATGTGAAAGGCGTGCAAAAGGTATTCCttcttttaaagaaattatGAAA
GGATTCCAAGTACTTGTTTTACTGGTATGTCAGGTAGGTTGAAAGatcaa
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025688-exon-sc0000542-1491911889:65178..66127 | TCONS_00025688-exon-sc0000542-1491911889:65178..66127 | Clytia hemisphaerica | exon |
| TCONS_00025688-exon-sc0000542-1510915933:65178..66127 | TCONS_00025688-exon-sc0000542-1510915933:65178..66127 | Clytia hemisphaerica | exon |
| TCONS_00025688-exon-sc0000542-1575043694:65178..66127 | TCONS_00025688-exon-sc0000542-1575043694:65178..66127 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000542 | supercontig | sc0000542:65178..66127 . |
Blast
The following BLAST results are available for this feature:
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