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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025747 ID=TCONS_00025747|Name=TCONS_00025747|organism=Clytia hemisphaerica|type=transcript|length=934bp
TCTTTGTCATTTAAAGAAAAGTAAGTGTCCTTGCACTGTTGATATTTTCA
TTGATATAGGGTAATAGGATGTTTTTCTATCATTTTTACGTCAGAGACAT
ATTTACAAAACATACTGTATTTATAAAAGTATTCCAGTGTACGTATTCTA
TAAACATAAAACAAAGGGGGCCCCAACAAACAACATAAACAACCTGAAGT
GACGCTGAAAACCTTTTTCGCATTTTAGTAAGAGAGATTGGGAAAGTATC
AAAGATGACGTTTCAGTGAGtggaaaactttcaaaagatACTTACTCCTG
TTATCGAAAAGGAACGCTACTTGTAAAGGGAAGAAGATATAAACGTTCAA
CAAAAGCCATCAACAGCGTTGTCCTTGTTTCATTAAATTCAACGTCTTTT
GTTTTCCAAATCGATTATTTCACCGTCGAGCAGAAATGCGTATATTTTCA
TGGgattcagatcaaaacaaaaatggactCAATTGCTCCTGGGATTATTC
GTTCTTCTAAAATGGCTGTCGTTGAGGAAGAGTGCTCTGATGTTAAGAAA
GTTGATGCAGAATTTATCAAAGAAAAGCTACTAATGATTGACGGTAACGA
AGACTTCAAATGTATTTCCCGACTACCTAATCACTTTGAATCAGATTAAA
ACAACGATCAAACAATGCCATCCAATCAAGCttgattataaaattttatt
catGTAGTTATATCTCATATTTGTATGTTGCCGTTAATCTATCTATGCGA
AATAAAATAAACTACTTTTCTGAAAAACGCAAGTTTTCTTCATTCTTTTC
TGTGCCCAGGCGacataaacaaatattttcagccGTGAGTGAGAGTGGTA
GGAAGTGGTAGCCAGAAATCAAATACCTTAAGTATTATCTTATATTCTCA
TGACAGGTTGTTAAACTCCAatgctaaagctctg Run BLAST on NCBI transcript from alignment at sc0000545:121500..122559+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025747 ID=TCONS_00025747|Name=TCONS_00025747|organism=Clytia hemisphaerica|type=transcript|length=1060bp|location=Sequence derived from alignment at sc0000545:121500..122559+ (Clytia hemisphaerica)
TCTTTGTCATTTAAAGAAAAGTAAGTGTCCTTGCACTGTTGATATTTTCA
TTGATATAGGGTAATAGGATGTTTTTCTATCATTTTTACGTCAGAGACAT
ATTTACAAAACATACTGTATTTATAAAAGTATTCCAGTGTACGTATTCTA
TAAACATAAAACAAAGGGGGCCCCAACAAACAACATAAACAACCTGAAGT
GACGCTGAAAACCTTTTTCGCATTTTAGTAAGAGAGATTGGGAAAGTATC
AAAGATGACGTTTCAGTGAGtggaaaactttcaaaagatACTTACTCCTG
TTATCGAAAAGGAACGCTACTTGTAAAGGGAAGAAGATATAAACGTTCAA
CAAAAGCCATCAACAGCGTTGTCCTTGTTTCATTAAATTCAACGTCTTTT
GTTTTCCAAATCGATTATTTCACCGTCGAGCAGAAATGCGTATATTTTCA
TGGgattcagatcaaaacaaaaatggactCAATTGCTCCTGGGATTATTC
GTTCTTCTAAAATGGCTGTCGTTGAGGAAGAGTGGTgagtgttttaaaaa
aattaaaagagattattatgatttttgaatttcttttccaGGTTAACTTA
AACTTAAGGAGACCTACAGCCCGTAACGTTGAACTTGAATTCTTCTGCTT
CATATTTTAGCTCTGATGTTAAGAAAGTTGATGCAGAATTTATCAAAGAA
AAGCTACTAATGATTGACGGTAACGAAGACTTCAAATGTATTTCCCGACT
ACCTAATCACTTTGAATCAGATTAAAACAACGATCAAACAATGCCATCCA
ATCAAGCttgattataaaattttattcatGTAGTTATATCTCATATTTGT
ATGTTGCCGTTAATCTATCTATGCGAAATAAAATAAACTACTTTTCTGAA
AAACGCAAGTTTTCTTCATTCTTTTCTGTGCCCAGGCGacataaacaaat
attttcagccGTGAGTGAGAGTGGTAGGAAGTGGTAGCCAGAAATCAAAT
ACCTTAAGTATTATCTTATATTCTCATGACAGGTTGTTAAACTCCAatgc
taaagctctg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025747-exon-sc0000545-1491911889:121500..122033 | TCONS_00025747-exon-sc0000545-1491911889:121500..122033 | Clytia hemisphaerica | exon |
| TCONS_00025747-exon-sc0000545-1510915933:121500..122033 | TCONS_00025747-exon-sc0000545-1510915933:121500..122033 | Clytia hemisphaerica | exon |
| TCONS_00025747-exon-sc0000545-1575043694:121500..122033 | TCONS_00025747-exon-sc0000545-1575043694:121500..122033 | Clytia hemisphaerica | exon |
| TCONS_00025747-exon-sc0000545-1491911889:122160..122559 | TCONS_00025747-exon-sc0000545-1491911889:122160..122559 | Clytia hemisphaerica | exon |
| TCONS_00025747-exon-sc0000545-1510915933:122160..122559 | TCONS_00025747-exon-sc0000545-1510915933:122160..122559 | Clytia hemisphaerica | exon |
| TCONS_00025747-exon-sc0000545-1575043694:122160..122559 | TCONS_00025747-exon-sc0000545-1575043694:122160..122559 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000545 | supercontig | sc0000545:121500..122559 + |
Blast
The following BLAST results are available for this feature:
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