TCONS_00025821 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025821
Unique NameTCONS_00025821
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2081

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025821 ID=TCONS_00025821|Name=TCONS_00025821|organism=Clytia hemisphaerica|type=transcript|length=2081bp
AATTTGCACTCAATGCTGAGAAGGAGTACCAGATATACAAAGGTCCGAAT
CTTGCTTTGAGTAGACCAACATATCAATCAAGCAACAATCGATGGGATGC
GGAACTAAGTTTTTTGGCAGTAGATGGCAAATATAAACAGTGTGAAGAGC
GAGATGATGGAATCTCAATGACTGGTTACGGTCATGGACAATCTTGGAGG
GTGATACTTGACGATGTTTACAAAATGACTTCTGTACTTCTCTACAATAT
TATCGACTACCGCAGTTCTAAAGAATTATCAAATGTCAATATCTATGTGG
AAGATGTCGGTGGTAAAAGTCATCTCTGTGCAAACACAGGTAATATGAAC
AGGGTCTACATCAAAGAGTTTAAATGTAAAGCTGGAGCCGTTGGTAATGT
TGTGACACTTCGTAAACAAGCTTCCGGTGGCATACGTTTGTGTGAAGTTG
TTGTTTACGGAGAGAAAGtggAGCGAGGACAGGCTCAAAATCTTGCTTTG
CATCGTCCAACAACTCAATCAAGCACTTTGAGACATCATGCAAGCGGTCA
TGCTGTAGATGGTCAAAAAGCCACATGCTCACTTTCTCAAAACACGTGTT
CCAAAACAGACATCACGTGGCATGGTAGAAAAACGTGGTGGGAGGTCTCT
TTAGATAATTCCTACCATATTGATCACGTGGTCATCTATGGATGTGGCAG
TTCATTGGCGgatattgttattttctctATCGAAGAAGAGGAAGGTTTTG
ATTTCAACAGAGACCGTGGAAGACAACCACGAGATTATTATGGAGGGGAG
ACGCGTCCTAATAGTGTACAACAAACCGTttcaatttgtaaaaatgtcgt
TAATGTTAATGATTCGCTCAATGTTCACAATTTCAAGTGTGATGCGCCAG
CTTTTGGGAATATTCTCCGGATTGAGAAGAAGCACTACGGAAATTATGAT
GAAAAATTNAATATCTATGTGGAAGATGTCGGTGGTAAAAGTCATCTCTG
TGCAAACACAGGTAATATGAACAGGGTCTACATCAAAGAGTTTAAATGTA
AAGCTGGAGCCGTTGGTAATGTTGTGACACTTCGTAAACAAGCTTCCGGT
GGCATACGTTTGTGTGAAGTTGTTGTTTACGGAGAGAAAGtggAGCGAGG
ACAGGCTCAAAATCTTGCTTTGCATCGTCCAACAACTCAATCAAGCACTT
TGAGACATCATGCAAGCGGTCATGCTGTAGATGGTCAAAAAGCCACATGC
TCACTTTCTCAAAACACGTGTTCCAAAACAGACATCACGTGGCATGGTAG
AAAAACGTGGTGGGAGGTCTCTTTAGATAATTCCTACCATATTGATCACG
TGGTCATCTATGGATGTGGCAGTTCATTGGCGgatattgttattttctct
ATCGAAGAAGAGGAAGGTTTTGATTTCAACAGAGACCGTGGAAGACAACC
ACGAGATTATTATGGAGGGGAGACGCGTCCTAATAGTGTACAACAAACCG
TttcaatttgtaaaaatgtcgtTAATGTTAATGATTCGCTCAATGTTCAC
AATTTCAAGTGTGATGCGCCAGCTTTTGGGAATATTCTCCGGATTGAGAA
GAAGCACTACGGAAATTATGATGAAAAATTGCAATTGTGTGAAGTGGAAG
TCTATGGTCACGAATTTTTAAGTTACGCTGCTGGGAAGGAGAATCTAGCT
TATCGTGGAGATACGAAGCAATCGAGCTACTATGATGGATCACACTGGTC
AAGTAAATACGACAGTTCACATGCCGTNAGCAATCGAGCTACTATGATGG
ATCACACTGGTCAAGTTAATACGACAGTTCACATGCCGCCAATGGTAATA
AAATGAATTGTCGACTTCCACAAAACACTTTGAGTGTAATTGGTGCAAGA
CGTTACCGTGACAGTTGGTGGCAAGTTCGTTTACATGCGCTCTCTAAAGT
CGAAAGTGTCATCATTTACAATCGCGAAGATTGCTGTAGTCAGTGGCGGC
CTgacagggggtgcagggtgtgcagtgcaccacccagaaagatctgagag
gggcgccaaaagagctttttaagggggcgcc
Run BLAST on NCBI

protein sequence of TCONS_00025821-protein

>TCONS_00025821-protein ID=TCONS_00025821-protein|Name=TCONS_00025821-protein|organism=Clytia hemisphaerica|type=polypeptide|length=617bp
FALNAEKEYQIYKGPNLALSRPTYQSSNNRWDAELSFLAVDGKYKQCEER
DDGISMTGYGHGQSWRVILDDVYKMTSVLLYNIIDYRSSKELSNVNIYVE
DVGGKSHLCANTGNMNRVYIKEFKCKAGAVGNVVTLRKQASGGIRLCEVV
VYGEKVERGQAQNLALHRPTTQSSTLRHHASGHAVDGQKATCSLSQNTCS
KTDITWHGRKTWWEVSLDNSYHIDHVVIYGCGSSLADIVIFSIEEEEGFD
FNRDRGRQPRDYYGGETRPNSVQQTVSICKNVVNVNDSLNVHNFKCDAPA
FGNILRIEKKHYGNYDEKXNIYVEDVGGKSHLCANTGNMNRVYIKEFKCK
AGAVGNVVTLRKQASGGIRLCEVVVYGEKVERGQAQNLALHRPTTQSSTL
RHHASGHAVDGQKATCSLSQNTCSKTDITWHGRKTWWEVSLDNSYHIDHV
VIYGCGSSLADIVIFSIEEEEGFDFNRDRGRQPRDYYGGETRPNSVQQTV
SICKNVVNVNDSLNVHNFKCDAPAFGNILRIEKKHYGNYDEKLQLCEVEV
YGHEFLSYAAGKENLAYRGDTKQSSYYDGSHWSSKYDSSHAXSNRATMMD
HTGQVNTTVHMPPMVIK
Run BLAST on NCBI

transcript from alignment at sc0000549:55782..59946+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025821 ID=TCONS_00025821|Name=TCONS_00025821|organism=Clytia hemisphaerica|type=transcript|length=4165bp|location=Sequence derived from alignment at sc0000549:55782..59946+ (Clytia hemisphaerica)
AATTTGCACTCAATGCTGAGAAGGAGTACCAGATATACAAAGGTATTAAT
AATCTTTGATAAAATTGACCAAGAGTGACCAATTAGGTTTTTCCGTTTTT
ATAGATTCCCTTTCTTAAAGGAACATTAAagtaataaaatgtaaacattg
caagaaccacgtgtcattaaaaagaacaattaaagtcacgtgtccaaaac
aaacgtaaaacaattgaacaatcaaaattagccacaTTTGGCttgatgtt
ttattttgacatgtgacatttgttttgattttgtatccgctgcatacagt
ttgtttacaaatttcgcaagtactgttatgtccctttaagctaAGTAAAC
TATTCTTctgtttaaaattaaaactGCAACGTTGAAAATTATGCTTATTT
GAGATACTCTCAAACGGTTATCCTTTCATACCCACTACCTAATCTCTTAG
AAGATCTAAGAGGGGATTCACTATTTACAAGAATCGTTAAGATTGGGTTA
GAAGTTAAATCTTGAAACAATAACATctattctttattttcaaagaatga
cgcatctctattgtttcaaaTAACCAATGAGtaaagcatcttgtaaaaac
tacATGTCATCTGACTTTCACCCCTCGGAAATAAGTTGCAGTTCACTTTA
ACAATTGTTTTTATACACCCTTGTTTTTACAGGTCCGAATCTTGCTTTGA
GTAGACCAACATATCAATCAAGCAACAATCGATGGGATGCGGAACTAAGT
TTTTTGGCAGTAGATGGCAAATATAAACAGTGTGAAGAGCGAGATGATGG
AATCTCAATGACTGGTTACGGTCATGGACAATCTTGGAGGGTGATACTTG
ACGATGTTTACAAAATGACTTCTGTACTTCTCTACAATATTATCGACTAC
CGCAGTTCTAAAGAATTATCAAATGTCAATATCTATGTGGAAGATGTCGG
TGGTAAAAGTCATCTCTGTGCAAACACAGGTAATATGAACAGGGTCTACA
TCAAAGAGTTTAAATGTAAAGCTGGAGCCGTTGGTAATGTTGTGACACTT
CGTAAACAAGCTTCCGGTGGCATACGTTTGTGTGAAGTTGTTGTTTACGG
AGAGAAAGGTAAGTTTATAATTTTCAATGACTTTCTCTTTTGACAACTCC
TAACTTCATCGCTTTCACCAAACATTAACAACATATCTAAAGACGTATCT
AATCTTGAGACCTGGGTGAGATCtatgtttcaaatatttccccTTCGCTT
CTTAGCCTCTGAAAAACAATTTGAAGGAGAGTGTCGACTATAAAAGAAAT
GAACAAAATTCAGGGCGCATGACGCGCTATATATACTGTAGGGCACTTGA
TGCACGTGACCCCTTAGCAGACTCCCTGTATCCACCACTGCTGACCTATT
TAATAgtaaagaaaatcattttttctttagtggAGCGAGGACAGGCTCAA
AATCTTGCTTTGCATCGTCCAACAACTCAATCAAGCACTTTGAGACATCA
TGCAAGCGGTCATGCTGTAGATGGTCAAAAAGCCACATGCTCACTTTCTC
AAAACACGTGTTCCAAAACAGACATCACGTGGCATGGTAGAAAAACGTGG
TGGGAGGTCTCTTTAGATAATTCCTACCATATTGATCACGTGGTCATCTA
TGGATGTGGCAGTTCATTGGCGgatattgttattttctctATCGAAGAAG
AGGAAGGTTTTGATTTCAACAGAGACCGTGGAAGACAACCACGAGATTAT
TATGGAGGGGAGACGCGTCCTAATAGTGTACAACAAACCGTttcaatttg
taaaaatgtcgtTAATGTTAATGATTCGCTCAATGTTCACAATTTCAAGT
GTGATGCGCCAGCTTTTGGGAATATTCTCCGGATTGAGAAGAAGCACTAC
GGAAATTATGATGAAAAATTNAATATCTATGTGGAAGATGTCGGTGGTAA
AAGTCATCTCTGTGCAAACACAGGTAATATGAACAGGGTCTACATCAAAG
AGTTTAAATGTAAAGCTGGAGCCGTTGGTAATGTTGTGACACTTCGTAAA
CAAGCTTCCGGTGGCATACGTTTGTGTGAAGTTGTTGTTTACGGAGAGAA
AGGTAAGTTTATAATTTTCAATGACTTTCTCTTTTGACAACTCCTAACTT
CATCGCTTTCACCAAACATTAACAACATATCTAAAGACGTATCTAATCTT
GAGACCTGGATGAGATCtatgtttcaaatatttccccTTCGCTTCTTAGC
CTCTGAAAAACAATTTGAAGGAGAGTGTCGACTATAAAAGAAATGAACAA
AATTCAGGGCGCATGACGCGCTATATATACTGTAGGGCACTTGATGCACG
TGACCCCTTAGCAGACTCCCTGTATCCACCACTGCTGACCTATTTAATAg
taaagaaaatcattttttctttagtggAGCGAGGACAGGCTCAAAATCTT
GCTTTGCATCGTCCAACAACTCAATCAAGCACTTTGAGACATCATGCAAG
CGGTCATGCTGTAGATGGTCAAAAAGCCACATGCTCACTTTCTCAAAACA
CGTGTTCCAAAACAGACATCACGTGGCATGGTAGAAAAACGTGGTGGGAG
GTCTCTTTAGATAATTCCTACCATATTGATCACGTGGTCATCTATGGATG
TGGCAGTTCATTGGCGgatattgttattttctctATCGAAGAAGAGGAAG
GTTTTGATTTCAACAGAGACCGTGGAAGACAACCACGAGATTATTATGGA
GGGGAGACGCGTCCTAATAGTGTACAACAAACCGTttcaatttgtaaaaa
tgtcgtTAATGTTAATGATTCGCTCAATGTTCACAATTTCAAGTGTGATG
CGCCAGCTTTTGGGAATATTCTCCGGATTGAGAAGAAGCACTACGGAAAT
TATGATGAAAAATTGCAATTGTGTGAAGTGGAAGTCTATGGTCACGAATG
TAAGTTCTCTTCTCTGATGCATAGCAGGTCCTGGcaatgtaaatttattt
tcatagcAATAAAAATTTTACCTGTCAGGATCTGGTATGAACCTCCGTTC
AACACAtctaaaatcttgaaaattcaaTGTCGATGAATGGGCAACAAGCA
TCAaggttttttatgtttttttaaaaacagcatGAACATGTAGACATCGC
TATTTTTGGGCTTAAACGAAGCGGACTCTGGCTCTGCCCAGGcagtacaa
aatgcataaaactcGAGAAATTAAATTATGAGAAATTAAGGATAAACCtt
gaaaaaatcagccattttgatgacgtcatagacAGAAAAATCAGAATAAC
TTTATGTATAAACAAGCTAAAGGTCTCAAATTTCGACAGCAGTGTCTTTG
AAAGCATTAAACTTTTTGCAGATATCAGCatattttagtcaaaaatgctt
tgattaattttagattttttaatcaTTGACTATCTTATAGTCCAAAACGA
AATCTTTATCCCGAAtaacaaaatgacaaaaagccGATCGATCGAGACAC
TCCACGCGTGAGGAAGTCTTCGTATGTTCCTCACTCTACTACCGCGTAAA
TTTTTCTTCAGCAGCCTTATCTGGCAGTATTACTCAGTTACATAATTTTC
CCGCGATTGGAGTTTTCAATATGGACGATAAATCGTCTAGAGTTAGTCCT
TTACTGGTGGGAACTAGACAAATTTTTGGTTCTTTTTTCCATCGGGTCGA
CAATATAGGGTATTCCAAagtaaattgatttttaaacttttttttccagT
TTTAAGTTACGCTGCTGGGAAGGAGAATCTAGCTTATCGTGGAGATACGA
AGCAATCGAGCTACTATGATGGATCACACTGGTCAAGTAAATACGACAGT
TCACATGCCGTNAGCAATCGAGCTACTATGATGGATCACACTGGTCAAGT
TAATACGACAGTTCACATGCCGCCAATGGTAATAAAATGAATTGTCGACT
TCCACAAAACACTTTGAGTGTAATTGGTGCAAGACGTTACCGTGACAGTT
GGTGGCAAGTTCGTTTACATGCGCTCTCTAAAGTCGAAAGTGTCATCATT
TACAATCGCGAAGATTGCTGTAGTCAGTGGCGGCCTgacagggggtgcag
ggtgtgcagtgcaccacccagaaagatctgagaggggcgccaaaagagct
ttttaagggggcgcc

Coding sequence (CDS) from alignment at sc0000549:55782..59946+

>TCONS_00025821 ID=TCONS_00025821|Name=TCONS_00025821|organism=Clytia hemisphaerica|type=CDS|length=9270bp|location=Sequence derived from alignment at sc0000549:55782..59946+ (Clytia hemisphaerica)
TTTGCACTCAATGCTGAGAAGGAGTACCAGATATACAAAGGTCCGAATCT
TGCTTTGAGTAGACCAACATATCAATCAAGCAACAATCGATGGGATGCGG
AACTAAGTTTTTTGGCAGTAGATGGCAAATATAAACAGTGTGAAGAGCGA
GATGATGGAATCTCAATGACTGGTTACGGTCATGGACAATCTTGGAGGGT
GATACTTGACGATGTTTACAAAATGACTTCTGTACTTCTCTACAATATTA
TCGACTACCGCAGTTCTAAAGAATTATCAAATGTCAATATCTATGTGGAA
GATGTCGGTGGTAAAAGTCATCTCTGTGCAAACACAGGTAATATGAACAG
GGTCTACATCAAAGAGTTTAAATGTAAAGCTGGAGCCGTTGGTAATGTTG
TGACACTTCGTAAACAAGCTTCCGGTGGCATACGTTTGTGTGAAGTTGTT
GTTTACGGAGAGAAAGtggAGCGAGGACAGGCTCAAAATCTTGCTTTGCA
TCGTCCAACAACTCAATCAAGCACTTTGAGACATCATGCAAGCGGTCATG
CTGTAGATGGTCAAAAAGCCACATGCTCACTTTCTCAAAACACGTGTTCC
AAAACAGACATCACGTGGCATGGTAGAAAAACGTGGTGGGAGGTCTCTTT
AGATAATTCCTACCATATTGATCACGTGGTCATCTATGGATGTGGCAGTT
CATTGGCGgatattgttattttctctATCGAAGAAGAGGAAGGTTTTGAT
TTCAACAGAGACCGTGGAAGACAACCACGAGATTATTATGGAGGGGAGAC
GCGTCCTAATAGTGTACAACAAACCGTttcaatttgtaaaaatgtcgtTA
ATGTTAATGATTCGCTCAATGTTCACAATTTCAAGTGTGATGCGCCAGCT
TTTGGGAATATTCTCCGGATTGAGAAGAAGCACTACGGAAATTATGATGA
AAAATTNAATATCTATGTGGAAGATGTCGGTGGTAAAAGTCATCTCTGTG
CAAACACAGGTAATATGAACAGGGTCTACATCAAAGAGTTTAAATGTAAA
GCTGGAGCCGTTGGTAATGTTGTGACACTTCGTAAACAAGCTTCCGGTGG
CATACGTTTGTGTGAAGTTGTTGTTTACGGAGAGAAAGtggAGCGAGGAC
AGGCTCAAAATCTTGCTTTGCATCGTCCAACAACTCAATCAAGCACTTTG
AGACATCATGCAAGCGGTCATGCTGTAGATGGTCAAAAAGCCACATGCTC
ACTTTCTCAAAACACGTGTTCCAAAACAGACATCACGTGGCATGGTAGAA
AAACGTGGTGGGAGGTCTCTTTAGATAATTCCTACCATATTGATCACGTG
GTCATCTATGGATGTGGCAGTTCATTGGCGgatattgttattttctctAT
CGAAGAAGAGGAAGGTTTTGATTTCAACAGAGACCGTGGAAGACAACCAC
GAGATTATTATGGAGGGGAGACGCGTCCTAATAGTGTACAACAAACCGTt
tcaatttgtaaaaatgtcgtTAATGTTAATGATTCGCTCAATGTTCACAA
TTTCAAGTGTGATGCGCCAGCTTTTGGGAATATTCTCCGGATTGAGAAGA
AGCACTACGGAAATTATGATGAAAAATTGCAATTGTGTGAAGTGGAAGTC
TATGGTCACGAATTTTTAAGTTACGCTGCTGGGAAGGAGAATCTAGCTTA
TCGTGGAGATACGAAGCAATCGAGCTACTATGATGGATCACACTGGTCAA
GTAAATACGACAGTTCACATGCCGTNAGCAATCGAGCTACTATGATGGAT
CACACTGGTCAAGTTAATACGACAGTTCACATGCCGCCAATGGTAATAAA
ATGATTTGCACTCAATGCTGAGAAGGAGTACCAGATATACAAAGGTCCGA
ATCTTGCTTTGAGTAGACCAACATATCAATCAAGCAACAATCGATGGGAT
GCGGAACTAAGTTTTTTGGCAGTAGATGGCAAATATAAACAGTGTGAAGA
GCGAGATGATGGAATCTCAATGACTGGTTACGGTCATGGACAATCTTGGA
GGGTGATACTTGACGATGTTTACAAAATGACTTCTGTACTTCTCTACAAT
ATTATCGACTACCGCAGTTCTAAAGAATTATCAAATGTCAATATCTATGT
GGAAGATGTCGGTGGTAAAAGTCATCTCTGTGCAAACACAGGTAATATGA
ACAGGGTCTACATCAAAGAGTTTAAATGTAAAGCTGGAGCCGTTGGTAAT
GTTGTGACACTTCGTAAACAAGCTTCCGGTGGCATACGTTTGTGTGAAGT
TGTTGTTTACGGAGAGAAAGtggAGCGAGGACAGGCTCAAAATCTTGCTT
TGCATCGTCCAACAACTCAATCAAGCACTTTGAGACATCATGCAAGCGGT
CATGCTGTAGATGGTCAAAAAGCCACATGCTCACTTTCTCAAAACACGTG
TTCCAAAACAGACATCACGTGGCATGGTAGAAAAACGTGGTGGGAGGTCT
CTTTAGATAATTCCTACCATATTGATCACGTGGTCATCTATGGATGTGGC
AGTTCATTGGCGgatattgttattttctctATCGAAGAAGAGGAAGGTTT
TGATTTCAACAGAGACCGTGGAAGACAACCACGAGATTATTATGGAGGGG
AGACGCGTCCTAATAGTGTACAACAAACCGTttcaatttgtaaaaatgtc
gtTAATGTTAATGATTCGCTCAATGTTCACAATTTCAAGTGTGATGCGCC
AGCTTTTGGGAATATTCTCCGGATTGAGAAGAAGCACTACGGAAATTATG
ATGAAAAATTNAATATCTATGTGGAAGATGTCGGTGGTAAAAGTCATCTC
TGTGCAAACACAGGTAATATGAACAGGGTCTACATCAAAGAGTTTAAATG
TAAAGCTGGAGCCGTTGGTAATGTTGTGACACTTCGTAAACAAGCTTCCG
GTGGCATACGTTTGTGTGAAGTTGTTGTTTACGGAGAGAAAGtggAGCGA
GGACAGGCTCAAAATCTTGCTTTGCATCGTCCAACAACTCAATCAAGCAC
TTTGAGACATCATGCAAGCGGTCATGCTGTAGATGGTCAAAAAGCCACAT
GCTCACTTTCTCAAAACACGTGTTCCAAAACAGACATCACGTGGCATGGT
AGAAAAACGTGGTGGGAGGTCTCTTTAGATAATTCCTACCATATTGATCA
CGTGGTCATCTATGGATGTGGCAGTTCATTGGCGgatattgttattttct
ctATCGAAGAAGAGGAAGGTTTTGATTTCAACAGAGACCGTGGAAGACAA
CCACGAGATTATTATGGAGGGGAGACGCGTCCTAATAGTGTACAACAAAC
CGTttcaatttgtaaaaatgtcgtTAATGTTAATGATTCGCTCAATGTTC
ACAATTTCAAGTGTGATGCGCCAGCTTTTGGGAATATTCTCCGGATTGAG
AAGAAGCACTACGGAAATTATGATGAAAAATTGCAATTGTGTGAAGTGGA
AGTCTATGGTCACGAATTTTTAAGTTACGCTGCTGGGAAGGAGAATCTAG
CTTATCGTGGAGATACGAAGCAATCGAGCTACTATGATGGATCACACTGG
TCAAGTAAATACGACAGTTCACATGCCGTNAGCAATCGAGCTACTATGAT
GGATCACACTGGTCAAGTTAATACGACAGTTCACATGCCGCCAATGGTAA
TAAAATGATTTGCACTCAATGCTGAGAAGGAGTACCAGATATACAAAGGT
CCGAATCTTGCTTTGAGTAGACCAACATATCAATCAAGCAACAATCGATG
GGATGCGGAACTAAGTTTTTTGGCAGTAGATGGCAAATATAAACAGTGTG
AAGAGCGAGATGATGGAATCTCAATGACTGGTTACGGTCATGGACAATCT
TGGAGGGTGATACTTGACGATGTTTACAAAATGACTTCTGTACTTCTCTA
CAATATTATCGACTACCGCAGTTCTAAAGAATTATCAAATGTCAATATCT
ATGTGGAAGATGTCGGTGGTAAAAGTCATCTCTGTGCAAACACAGGTAAT
ATGAACAGGGTCTACATCAAAGAGTTTAAATGTAAAGCTGGAGCCGTTGG
TAATGTTGTGACACTTCGTAAACAAGCTTCCGGTGGCATACGTTTGTGTG
AAGTTGTTGTTTACGGAGAGAAAGtggAGCGAGGACAGGCTCAAAATCTT
GCTTTGCATCGTCCAACAACTCAATCAAGCACTTTGAGACATCATGCAAG
CGGTCATGCTGTAGATGGTCAAAAAGCCACATGCTCACTTTCTCAAAACA
CGTGTTCCAAAACAGACATCACGTGGCATGGTAGAAAAACGTGGTGGGAG
GTCTCTTTAGATAATTCCTACCATATTGATCACGTGGTCATCTATGGATG
TGGCAGTTCATTGGCGgatattgttattttctctATCGAAGAAGAGGAAG
GTTTTGATTTCAACAGAGACCGTGGAAGACAACCACGAGATTATTATGGA
GGGGAGACGCGTCCTAATAGTGTACAACAAACCGTttcaatttgtaaaaa
tgtcgtTAATGTTAATGATTCGCTCAATGTTCACAATTTCAAGTGTGATG
CGCCAGCTTTTGGGAATATTCTCCGGATTGAGAAGAAGCACTACGGAAAT
TATGATGAAAAATTNAATATCTATGTGGAAGATGTCGGTGGTAAAAGTCA
TCTCTGTGCAAACACAGGTAATATGAACAGGGTCTACATCAAAGAGTTTA
AATGTAAAGCTGGAGCCGTTGGTAATGTTGTGACACTTCGTAAACAAGCT
TCCGGTGGCATACGTTTGTGTGAAGTTGTTGTTTACGGAGAGAAAGtggA
GCGAGGACAGGCTCAAAATCTTGCTTTGCATCGTCCAACAACTCAATCAA
GCACTTTGAGACATCATGCAAGCGGTCATGCTGTAGATGGTCAAAAAGCC
ACATGCTCACTTTCTCAAAACACGTGTTCCAAAACAGACATCACGTGGCA
TGGTAGAAAAACGTGGTGGGAGGTCTCTTTAGATAATTCCTACCATATTG
ATCACGTGGTCATCTATGGATGTGGCAGTTCATTGGCGgatattgttatt
ttctctATCGAAGAAGAGGAAGGTTTTGATTTCAACAGAGACCGTGGAAG
ACAACCACGAGATTATTATGGAGGGGAGACGCGTCCTAATAGTGTACAAC
AAACCGTttcaatttgtaaaaatgtcgtTAATGTTAATGATTCGCTCAAT
GTTCACAATTTCAAGTGTGATGCGCCAGCTTTTGGGAATATTCTCCGGAT
TGAGAAGAAGCACTACGGAAATTATGATGAAAAATTGCAATTGTGTGAAG
TGGAAGTCTATGGTCACGAATTTTTAAGTTACGCTGCTGGGAAGGAGAAT
CTAGCTTATCGTGGAGATACGAAGCAATCGAGCTACTATGATGGATCACA
CTGGTCAAGTAAATACGACAGTTCACATGCCGTNAGCAATCGAGCTACTA
TGATGGATCACACTGGTCAAGTTAATACGACAGTTCACATGCCGCCAATG
GTAATAAAATGATTTGCACTCAATGCTGAGAAGGAGTACCAGATATACAA
AGGTCCGAATCTTGCTTTGAGTAGACCAACATATCAATCAAGCAACAATC
GATGGGATGCGGAACTAAGTTTTTTGGCAGTAGATGGCAAATATAAACAG
TGTGAAGAGCGAGATGATGGAATCTCAATGACTGGTTACGGTCATGGACA
ATCTTGGAGGGTGATACTTGACGATGTTTACAAAATGACTTCTGTACTTC
TCTACAATATTATCGACTACCGCAGTTCTAAAGAATTATCAAATGTCAAT
ATCTATGTGGAAGATGTCGGTGGTAAAAGTCATCTCTGTGCAAACACAGG
TAATATGAACAGGGTCTACATCAAAGAGTTTAAATGTAAAGCTGGAGCCG
TTGGTAATGTTGTGACACTTCGTAAACAAGCTTCCGGTGGCATACGTTTG
TGTGAAGTTGTTGTTTACGGAGAGAAAGtggAGCGAGGACAGGCTCAAAA
TCTTGCTTTGCATCGTCCAACAACTCAATCAAGCACTTTGAGACATCATG
CAAGCGGTCATGCTGTAGATGGTCAAAAAGCCACATGCTCACTTTCTCAA
AACACGTGTTCCAAAACAGACATCACGTGGCATGGTAGAAAAACGTGGTG
GGAGGTCTCTTTAGATAATTCCTACCATATTGATCACGTGGTCATCTATG
GATGTGGCAGTTCATTGGCGgatattgttattttctctATCGAAGAAGAG
GAAGGTTTTGATTTCAACAGAGACCGTGGAAGACAACCACGAGATTATTA
TGGAGGGGAGACGCGTCCTAATAGTGTACAACAAACCGTttcaatttgta
aaaatgtcgtTAATGTTAATGATTCGCTCAATGTTCACAATTTCAAGTGT
GATGCGCCAGCTTTTGGGAATATTCTCCGGATTGAGAAGAAGCACTACGG
AAATTATGATGAAAAATTNAATATCTATGTGGAAGATGTCGGTGGTAAAA
GTCATCTCTGTGCAAACACAGGTAATATGAACAGGGTCTACATCAAAGAG
TTTAAATGTAAAGCTGGAGCCGTTGGTAATGTTGTGACACTTCGTAAACA
AGCTTCCGGTGGCATACGTTTGTGTGAAGTTGTTGTTTACGGAGAGAAAG
tggAGCGAGGACAGGCTCAAAATCTTGCTTTGCATCGTCCAACAACTCAA
TCAAGCACTTTGAGACATCATGCAAGCGGTCATGCTGTAGATGGTCAAAA
AGCCACATGCTCACTTTCTCAAAACACGTGTTCCAAAACAGACATCACGT
GGCATGGTAGAAAAACGTGGTGGGAGGTCTCTTTAGATAATTCCTACCAT
ATTGATCACGTGGTCATCTATGGATGTGGCAGTTCATTGGCGgatattgt
tattttctctATCGAAGAAGAGGAAGGTTTTGATTTCAACAGAGACCGTG
GAAGACAACCACGAGATTATTATGGAGGGGAGACGCGTCCTAATAGTGTA
CAACAAACCGTttcaatttgtaaaaatgtcgtTAATGTTAATGATTCGCT
CAATGTTCACAATTTCAAGTGTGATGCGCCAGCTTTTGGGAATATTCTCC
GGATTGAGAAGAAGCACTACGGAAATTATGATGAAAAATTGCAATTGTGT
GAAGTGGAAGTCTATGGTCACGAATTTTTAAGTTACGCTGCTGGGAAGGA
GAATCTAGCTTATCGTGGAGATACGAAGCAATCGAGCTACTATGATGGAT
CACACTGGTCAAGTAAATACGACAGTTCACATGCCGTNAGCAATCGAGCT
ACTATGATGGATCACACTGGTCAAGTTAATACGACAGTTCACATGCCGCC
AATGGTAATAAAATGATTTGCACTCAATGCTGAGAAGGAGTACCAGATAT
ACAAAGGTCCGAATCTTGCTTTGAGTAGACCAACATATCAATCAAGCAAC
AATCGATGGGATGCGGAACTAAGTTTTTTGGCAGTAGATGGCAAATATAA
ACAGTGTGAAGAGCGAGATGATGGAATCTCAATGACTGGTTACGGTCATG
GACAATCTTGGAGGGTGATACTTGACGATGTTTACAAAATGACTTCTGTA
CTTCTCTACAATATTATCGACTACCGCAGTTCTAAAGAATTATCAAATGT
CAATATCTATGTGGAAGATGTCGGTGGTAAAAGTCATCTCTGTGCAAACA
CAGGTAATATGAACAGGGTCTACATCAAAGAGTTTAAATGTAAAGCTGGA
GCCGTTGGTAATGTTGTGACACTTCGTAAACAAGCTTCCGGTGGCATACG
TTTGTGTGAAGTTGTTGTTTACGGAGAGAAAGtggAGCGAGGACAGGCTC
AAAATCTTGCTTTGCATCGTCCAACAACTCAATCAAGCACTTTGAGACAT
CATGCAAGCGGTCATGCTGTAGATGGTCAAAAAGCCACATGCTCACTTTC
TCAAAACACGTGTTCCAAAACAGACATCACGTGGCATGGTAGAAAAACGT
GGTGGGAGGTCTCTTTAGATAATTCCTACCATATTGATCACGTGGTCATC
TATGGATGTGGCAGTTCATTGGCGgatattgttattttctctATCGAAGA
AGAGGAAGGTTTTGATTTCAACAGAGACCGTGGAAGACAACCACGAGATT
ATTATGGAGGGGAGACGCGTCCTAATAGTGTACAACAAACCGTttcaatt
tgtaaaaatgtcgtTAATGTTAATGATTCGCTCAATGTTCACAATTTCAA
GTGTGATGCGCCAGCTTTTGGGAATATTCTCCGGATTGAGAAGAAGCACT
ACGGAAATTATGATGAAAAATTNAATATCTATGTGGAAGATGTCGGTGGT
AAAAGTCATCTCTGTGCAAACACAGGTAATATGAACAGGGTCTACATCAA
AGAGTTTAAATGTAAAGCTGGAGCCGTTGGTAATGTTGTGACACTTCGTA
AACAAGCTTCCGGTGGCATACGTTTGTGTGAAGTTGTTGTTTACGGAGAG
AAAGtggAGCGAGGACAGGCTCAAAATCTTGCTTTGCATCGTCCAACAAC
TCAATCAAGCACTTTGAGACATCATGCAAGCGGTCATGCTGTAGATGGTC
AAAAAGCCACATGCTCACTTTCTCAAAACACGTGTTCCAAAACAGACATC
ACGTGGCATGGTAGAAAAACGTGGTGGGAGGTCTCTTTAGATAATTCCTA
CCATATTGATCACGTGGTCATCTATGGATGTGGCAGTTCATTGGCGgata
ttgttattttctctATCGAAGAAGAGGAAGGTTTTGATTTCAACAGAGAC
CGTGGAAGACAACCACGAGATTATTATGGAGGGGAGACGCGTCCTAATAG
TGTACAACAAACCGTttcaatttgtaaaaatgtcgtTAATGTTAATGATT
CGCTCAATGTTCACAATTTCAAGTGTGATGCGCCAGCTTTTGGGAATATT
CTCCGGATTGAGAAGAAGCACTACGGAAATTATGATGAAAAATTGCAATT
GTGTGAAGTGGAAGTCTATGGTCACGAATTTTTAAGTTACGCTGCTGGGA
AGGAGAATCTAGCTTATCGTGGAGATACGAAGCAATCGAGCTACTATGAT
GGATCACACTGGTCAAGTAAATACGACAGTTCACATGCCGTNAGCAATCG
AGCTACTATGATGGATCACACTGGTCAAGTTAATACGACAGTTCACATGC
CGCCAATGGTAATAAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014512XLOC_014512Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025821-exon-sc0000549-1491911889:55782..55823TCONS_00025821-exon-sc0000549-1491911889:55782..55823Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1510915933:55782..55823TCONS_00025821-exon-sc0000549-1510915933:55782..55823Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1575043694:55782..55823TCONS_00025821-exon-sc0000549-1575043694:55782..55823Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1491911889:56464..56889TCONS_00025821-exon-sc0000549-1491911889:56464..56889Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1510915933:56464..56889TCONS_00025821-exon-sc0000549-1510915933:56464..56889Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1575043694:56464..56889TCONS_00025821-exon-sc0000549-1575043694:56464..56889Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1491911889:57212..57883TCONS_00025821-exon-sc0000549-1491911889:57212..57883Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1510915933:57212..57883TCONS_00025821-exon-sc0000549-1510915933:57212..57883Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1575043694:57212..57883TCONS_00025821-exon-sc0000549-1575043694:57212..57883Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1491911889:58206..58730TCONS_00025821-exon-sc0000549-1491911889:58206..58730Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1510915933:58206..58730TCONS_00025821-exon-sc0000549-1510915933:58206..58730Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1575043694:58206..58730TCONS_00025821-exon-sc0000549-1575043694:58206..58730Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1491911889:59531..59946TCONS_00025821-exon-sc0000549-1491911889:59531..59946Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1510915933:59531..59946TCONS_00025821-exon-sc0000549-1510915933:59531..59946Clytia hemisphaericaexon
TCONS_00025821-exon-sc0000549-1575043694:59531..59946TCONS_00025821-exon-sc0000549-1575043694:59531..59946Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025821-proteinTCONS_00025821-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000549supercontigsc0000549:55782..59946 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0483348	0.0942681	0.0547271	0	2.54211	1.23619	0.745704	1.51259	1.26265	1.4631	0	1.31982	0	0	0	0	0.145139	0	0	0	0	0	0.166259	0.100769	0	0	0	0	0.107296	0.273293
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006585FTP1
IPR008979Galactose-bd-like
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025821 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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