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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00025922 ID=TCONS_00025922|Name=TCONS_00025922|organism=Clytia hemisphaerica|type=transcript|length=629bp
AAAAACTTGGAATAATTCCTAGTAATGTTGAATGGGGTTCCCAATCTGGT
GATGTTTTTAAATATCAATCCGTTGATTTCATGAAACCTGTCATTGATTA
TGTTGATCGGCTAATCAATTATGGAAATAAGGTTGTTGTATTTCAAGGCC
AACTTGATATGATTTGTGATACACCAGGAGCAGAAAAAATGGATCAATAA
AGTCAAATGGCCAGGACTTTCCACATTCAAATCAACACCAAGAAAGCCTA
TTTATCTACCCGAAAGTGGCAAGAACACACAAGTTTTCGTTAAAACATAT
GAGAATTTTAGCTTATATTACATTATGAATGCTGGTCATATGGTTCCCTC
TGACAATGGACCGATGGCTCTGCAAATGGTGGATGAAATTATCAATTCAT
AAAACTTTTAAGGGATATTGCGAACTTGAAGATACTGATATTACTCTAGT
AAAGATCTAAACTAAGATCAACTCCGAAATCTGTCAAAAAATAATGAACT
ATAATATCAGAATTAGAAAGCCAGATAGCTTGTTGCAGTCATAATAGGCA
CATTTCCTAGCACTAGCATGTGATAAATATGTATAAACACAGATAAACAT
GATAAGCATTGTAATTATTCAAACTTTTC Run BLAST on NCBI transcript from alignment at sc0000555:61516..63107+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00025922 ID=TCONS_00025922|Name=TCONS_00025922|organism=Clytia hemisphaerica|type=transcript|length=1592bp|location=Sequence derived from alignment at sc0000555:61516..63107+ (Clytia hemisphaerica)
AAAAACTTGGAATAATTCCTAGTAATGTTGAATGGGGTTCCCAATCTGGT
GATGTTTTTAAATATCAATCCGTTGATTTCATGAAACCTGTCATTGATTA
TGTTGATCGGCTAATCAATTATGGAAATAAGGTTGTTGTATTTCAAGGCC
AACTTGATATGATTTGTGATACACCAGGAGCAGAAAAAATGGATCAATAA
AGTCAAATGGCCAGGACTTTCCACATTCAAATCAACACCAAGAAAGCCTA
TTTATCTACCCGAAAGTGGCAAGAACACACAAGTTTTCGTTAAAACATAT
GAGAATTTTAGCTTATATTACATTATGAATGCTGGTCATATGGTTCCCTC
TGACAATGGACCGATGGCTCTGCAAATGGTGGATGAAATTATCAATTCAT
AAAACTTTTAAGGGATATTGCGAACTTGAAGATACTGATATTACTCTAGT
AAAGATCAAAACTAAGATCAACTCTGAAATCTGGTAAAAAACAATGAACT
TTAATATCAGAATTAAAAGAACCAGATAGCTTGTTGTAGTCATAATAGGC
ACAAGCTATGTGATAAATATGTNacgctggagttcttttgtttatatctc
ggagaaaaatttttcaaacgacttgaaactttctgacttttaataaaatc
ttattaagagtacttgtacaaAATTCTAGGGTCATaagttgtccagatca
ggttttatgactttattgtgaaacataaCATAAAACCcaactaaaatcct
taaaactcaaaattttaaagtgctgataacttctaaactatttattcaat
cattttcaaattttgacacgtgataggcattgataatacaaatttaaaaa
atttaaagaataattttgaaaatgatgacgtcactcatcttcagcataga
ttttaagaaaaaatcttcatggaaattgcaaaaccggcaatcatgttaaa
gaacagtgttttacctttcagaatcttcaaacagaatcgaaatatcttta
ttggttcgactgtaatagacatttttgtaaaccatatatttgggcttttt
ttcgacaggtggaaattttgtgatgacgtcatcagtttttgaatgacgac
atcatttttttttcttcttggaaaattgtatcatgatggagaacatctgt
accaaatttcatggccatagctcttctagatcgaaaataatcgagggtgg
tagattctacccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNcccccccccccccctggggatacgaaagtaaa
aaaagcttggggctaatagggttaagggtGTTGCAAACTTGAAGATACTG
ACATTACTCTAGTAAAGATCTAAACTAAGATCAACTCCGAAATCTGTCAA
AAAATAATGAACTATAATATCAGAATTAGAAAGCCAGATAGCTTGTTGCA
GTCATAATAGGCACATTTCCTAGCACTAGCATGTGATAAATATGTATAAA
CACAGATAAACATGATAAGCATTGTAATTATTCAAACTTTTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00025922-exon-sc0000555-1491911889:61516..61954 | TCONS_00025922-exon-sc0000555-1491911889:61516..61954 | Clytia hemisphaerica | exon |
| TCONS_00025922-exon-sc0000555-1510915933:61516..61954 | TCONS_00025922-exon-sc0000555-1510915933:61516..61954 | Clytia hemisphaerica | exon |
| TCONS_00025922-exon-sc0000555-1575043694:61516..61954 | TCONS_00025922-exon-sc0000555-1575043694:61516..61954 | Clytia hemisphaerica | exon |
| TCONS_00025922-exon-sc0000555-1491911889:62918..63107 | TCONS_00025922-exon-sc0000555-1491911889:62918..63107 | Clytia hemisphaerica | exon |
| TCONS_00025922-exon-sc0000555-1510915933:62918..63107 | TCONS_00025922-exon-sc0000555-1510915933:62918..63107 | Clytia hemisphaerica | exon |
| TCONS_00025922-exon-sc0000555-1575043694:62918..63107 | TCONS_00025922-exon-sc0000555-1575043694:62918..63107 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000555 | supercontig | sc0000555:61516..63107 + |
Blast
The following BLAST results are available for this feature:
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