TCONS_00025934 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025934
Unique NameTCONS_00025934
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1013

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025934 ID=TCONS_00025934|Name=TCONS_00025934|organism=Clytia hemisphaerica|type=transcript|length=1013bp
tgtcATTTTAACAAATTGATTTTCAGACAGGCTTAAAATTTGCTTTTCTC
gattataaagtaaatgctacAAATTTTTGAAGAGTTGATGTAGTCGTTGG
TTCAGTTTGATAGACAGAGATTACCAATCAAAAAAGACTGGCACGGAATC
GGAAGAAGATCACGTGACTAatggtgacgtcatcataaaaatGCATCCGT
TTGTCCGCCAGACAACAGTCACGTCCGCTTTGGGTCGCCAGTCGACGTTT
GATTTGCTTGATGATGAAGTCTTGTTAAGCACAGATGACAAAAAACGCAG
GAAAAGACTAACTCGTCGTGGTGTTTTGATTCTTATCTTGGGATCGTTCA
TTGTTCTTTGCGCTGCTGGAGGTCTGGGAACAATGGCTTATTTTCATAAG
AAGGCGTGGCACCGTGTGAAATACGGTCGCCTTGCAATGGTACTAGATGC
TTCACCAAATAACAATGCAAAAATCACAATGCATTTGTACGAATTGTCGG
CGAAAGATCGAATATCTGAAATTAATCAATCTGCATGTCAGGgTCTAAAA
CCCAAGCAAATTACCTTATGTATCAATCAAACGCTCAAAGATTATTCTGA
TATTGGTCCTAAAATTCCGCTGCACGTGCTTCATAGAAAAGGCGCAAATG
AAAGTATGATGGCCTACTTGAAGGGGAATCTGACCAATCAAATATCGCCA
CCAAGTTTTGAAGAAGTTGATGAAAacaaaaagctgatttttttgtGGTT
AACGATTTATCGAAATCTGAAATCGAAATCGTTCGGCATTTTTCGTACAA
CGAAATCATCAGTTGAATACGTAGGGGAGACGGTACCGTCAAATGGGACA
GCGAAAGACACGGCGTTCACGACGTCTGCCGGGGTTGCTCTGACCAGTTT
TAGAATACCGAACGAAGACATCTTCAACAAGCAGCGTTTAGTATTGGTAA
AGAGTTTCAACACAAATGGAAGCAATATAAACGATCCTTGCGGAGAAAAA
GGATCCGTGAAAA
Run BLAST on NCBI

protein sequence of TCONS_00025934-protein

>TCONS_00025934-protein ID=TCONS_00025934-protein|Name=TCONS_00025934-protein|organism=Clytia hemisphaerica|type=polypeptide|length=274bp
MHPFVRQTTVTSALGRQSTFDLLDDEVLLSTDDKKRRKRLTRRGVLILIL
GSFIVLCAAGGLGTMAYFHKKAWHRVKYGRLAMVLDASPNNNAKITMHLY
ELSAKDRISEINQSACQGLKPKQITLCINQTLKDYSDIGPKIPLHVLHRK
GANESMMAYLKGNLTNQISPPSFEEVDENKKLIFLWLTIYRNLKSKSFGI
FRTTKSSVEYVGETVPSNGTAKDTAFTTSAGVALTSFRIPNEDIFNKQRL
VLVKSFNTNGSNINDPCGEKGSVK
Run BLAST on NCBI

transcript from alignment at sc0000555:200819..212833+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025934 ID=TCONS_00025934|Name=TCONS_00025934|organism=Clytia hemisphaerica|type=transcript|length=12015bp|location=Sequence derived from alignment at sc0000555:200819..212833+ (Clytia hemisphaerica)
tgtcATTTTAACAAATTGATTTTCAGACAGGCTTAAAATTTGCTTTTCTC
gattataaagtaaatgctacAAATTTTTGAAGAGTTGATGTAGTCGTTGG
TTCAGTTTGATAGACAGGTAATATGAATTTAATAACTTTTCATGCCGATC
AGTTGAAGGCATAAATTATTACTctaaataagattttttttgtctATCGA
AACGAAGTCAAAGATAAATCTTGCAAACAATAACGAACTTCCAATATTAA
GATTGTACGTTTCTGTTGCGGTTCTGTTGTAACCACGAAAGctatttaat
tctgaaaattgttatCAATCATTCTACTTCCTTCATATTTCCAAATAATA
CTTGATAACGTTTTGCACAACATTCCAATAAAAGTTGCATTTATGACAAT
TATTCTGTTACCTAAACTCTTTGACTCATGTAAAGGATATATAcataaaa
atttattaaaacttACAAACTAGTTTTTACAATGGATATAACGAAACAGG
AATTAGATGTTGAAAGATTTCCGTCTTATGATTACAGAGATTACCAATCA
AAAAAGACTGGCACGGAATCGGAAGAAGATCACGTGACTAatggtgacgt
catcataaaaatGCATCCGTTTGTCCGCCAGACAACAGTCACGTCCGCTT
TGGGTCGCCAGTCGACGTTTGATTTGCTTGATGATGAAGTCTTGTTAAGC
ACAGATGACAAAAAACGCAGGAAAAGACTAAGTAAGAGTTATAGTTGATT
TAGACAAATTTATttacaaatcactatctaacctaagaaataagcccaaa
gccgaagaaaattcgcaaacgggctTTTTACCAAAAGAGTTTCTTCGTAA
CTCTCCTGTCGAATTTTTTCCGTGTAATACCGCCACAACGCCATACCGct
atattttcccgcctttactatcaatGTAACGGATGATAACATCGTCTACA
TTTGATTACCCTTagtggataaatatttttgctcGGACTTCTTTTTTTGA
CGAATCGAAAtctaaatcgaaatcgaaaTGTCACGTCTCAAccgcttttt
catttttttgtaggGGTAATAGCACAAATcctgaatttaaattttttgcg
aAAACTACACCGTGGTCTCTTACAAACGCATAAATTCTGCCAATTACCAT
TTAGCACAGggcatttcaattatttttttcacattCTTTAGCTCGTCGTG
GTGTTTTGATTCTTATCTTGGGATCGTTCATTGTTCTTTGCGCTGCTGGA
GGTCTGGGAACAATGGCTTATTTTCATAAGAAGGCGTGGCACCGTGTGAA
ATACGTAAGAAATATTTCTCCTTATTTTGATTGTTGCTCTTTCAAAGTTA
AGTAATAACAATATACTAAGAATATCACCGTCTTTGAGTTCGGCAACAGA
ACCTATGATTGcaatttttattgtattttttaccTGTAAATTGACAATTA
CCACCCAAAAATCATACCAGTCTATATTCCGCCCTTAAGCGTTTTCATAA
TTCTTTATTGAGCCTTACTGTTAATGGCATCTTAcaacctgaaaattgaa
aaaaagtctttCTCTATCATGTCGAGGTTCAGTCAAGGGCCGTCAAGTCA
TTATTTCTAATTTCTACTCGACTTATTCTATTCTTTTTTTATAGGGTCGC
CTTGCAATGGTACTAGATGCTTCACCAAATAACAATGCAAAAATCACAAT
GCATTTGTACGAATTGTCGGCGAAAGATCGAATATCTGAAATTAATCAAT
CTGCATGTCAGGGTATGTACCCAAAATCATCTTATACGTCAGGGTTGTCT
TGCAAGAGATCACAGTATTCCCCATGACCTCTTTTCTTGTTTCATTGAGC
TCCAattatgtttttttcatttctaaaGTAAGAATATTTTGATGAATTAG
TTTcttcaaaagaagaagaaattgcgaAAGTCCCGGGTTCCTTATTTTCT
TACAGAAGCTCCCTTCGATTATTTCGAAtaggaaaaaaaagtttctgata
aagatattttatttatggaatacaaaatcatttttcaggTCTAAAACCCA
AGCAAATTACCTTATGTATCAATCAAACGCTCAAAGATTATTCTGATATT
GGTCCTAAAATTCCGCTGCACGTGCTTCATAGAAAAGGCGCAAATGAAAG
GTAAGCTTCGTTACTTTTCTATTGTTGTGTAAAgttaaaaatcaatcaat
caaccaatcaaacgtAAAAAGTGGACTACTTCTATAATATCCCCGTATTT
CTGAATTTCTATCCGCAAAAATTAAGACTAAATTAATGGCTGCGCCAAGA
ACTAAATGAGGCTAGTTTTAAGGGAACACCAACACGAGAATGGCTTTTAT
ATTatggttaaaaaaaattatattagtATAAATTCTCGATATACAATGAA
AATGCAATTATTTTCTAGTATGATGGCCTACTTGAAGGGGAATCTGACCA
ATCAAATATCGCCACCAAGTTTTGAAGAAGTTGATGAAAacaaaaagctg
atttttttgtGGTTAACGATTTATCGAAATCTGAAATCGGTAAATAAAAT
CAATTAGCGGCTAGAGATTGAGGAACTGGGTACTGCAATGGCTGGTTTCG
AGCTGTGGAGGGAGGGCTATTGTTTGTTTCCGACCTGTCCATTCGGACCT
AGATCAAAGGATGATGATTATTTAAGTTTTACTTGGTATTTCCAGCTATT
TAGTTTAAATGAAGAATTTCATTCACCTGATAGAAAAGTACCAGAGCTTT
GAGCACGGGCTCAAAAACAGGTATTCTTAAGACTCAACTTCTACATTCTT
GTAAGGGGCcttccacatagtacgtacgcactaatgggggagggggagtc
ttctcaaaagcgtatgcttgcgtacagggggaggggaggggtaaaaggaa
aatgtacgtacgcagagaaaaaattttcatagcctttttttggttgtttt
ttgtcgatttttacgcttcttatacgcattaaggaaaagaaaaagtttct
taataaacattgagtttcatgtatgaaataaaggtccgaaccaaacgatt
tgaattcgaaattttcttcaaccgaggggggggatgaaaaagtacgtact
taccagagggggtatagccatttgcgtacgcttgtgtactatgtggacgg
cccctaatcTAAAAGTGAAGCTCAagcaaaagtagactctagtgcCATTA
GCCTATTTTAAATGATTTGTACATCTGTCAGATGAGATTTTCTATTCAAG
TCAAAGAGTAAAGTGCACACAAATCTGCGTAAATTTTCTTTCGAGAAAAA
CGctgaaaaatattgatttttttgtcatcattactcttaggtgccaaata
aacgccccccccccccccNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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aagaccaatttaagaacaattgctgtttaatttttaagaactaataaaca
aaggtaatatcaccgtatatcaaaagttattgatttgattcttataaagt
aaatgcttataagaaaaatgaatatggtCATAATGTGCGCCTTCCCtggt
ttactttgtaagaactaattaccgaaaagtatattaccgtctaaaaagag
ttattgatttgattcttataaagtaaatgcttataagaaaaataaatgtg
ctcatattgtgtgccattgcttgtttactttgtaagaactaattaccgaa
aggtatattaccgtctatcaagagttattgatttgattcttataaagtat
atgcttataagaagaaaatatgctcatattgcgtGCCATCCTTtaattac
tttgtaagaactaattactgaaaggtacattaccgtctatcaagagttat
tgatttgattcttataaagtatatgcttataagaaaaataaatatgctca
tattgcgtGCCAtcatttgtttactttgtaagaactaattaccgaaaagt
atattattgtctatcaaaagttattgatttgattcttataatgtatatgc
ttataacaaaaataaatatcctcatattgtgcgccatcctttgtttactt
tgtaagaactaattaccgaaaagtatatcaccgtatatcaaaagttattg
atttgattcttgtaaagtatatgcttattgcccccgcaggagcgtagcga
cgaggaggcactcatagcttcacgcatagatattggactggaatctcgaa
attttgttgtttgttgtcgcgcaagcatccccgtagttagtctcttccgt
aaatgttcggttttttttcgggacagcagtatacatattttcatattacg
ttatatgctattaccattataaCGTATTAcgtattatattttattagttt
tgatttagcattgaaaagctgaagcgagtgttataaatgcaaattataga
aaaagtatagtgaTTACATAATAANNNNNNNNNNNNNNNNNNNNNNNNNN
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tattggaatggtaattttctcTCATAATATTCTATAGTCTTTAACTGAGA
CAGAAGTTGACAAAAAGTATTTAGGCTGGCTCAAATGCTAAGGGAGGGGC
ATATCATATGTATAGATTTTTGTCATCTCAGAGAAGAAGTCATTACATTG
TTTTTTCTGCGCGTTCTATTTTgtgccaatcaaattgcgtcacgcattcg
aaagattcgaaaatgttgcaatcaaaatcaaaacaaaaagttccATTTGT
GACTTTGGCAGACTTTGGCAGTTTGGCTTTTGAAAAGAACACATTGAGCT
TTTCAATAATAAAACCTATAATTATTACTCTCAagcttaaaaataaaact
tgagaaTGAaggaaagttgtaaaattaattaaattgagattcgattggaa
agaggtatgtatgtagaaaaatggaatgctttgtttgcttcagttttcgc
TGTAGACTATGGCAGCCTATATTTATCTAAACTTTATTCTTATCAAATGG
Tgattcaattttggatatcaaaaactcccaaggatgaccagtaatttttt
atttgaaacaaaactCTATACATATGCCCCTCCCTTAGCATTTGAGCCAG
CCTAAATACTTTTTGTCAACTTCTGTCTCAGTTAAAGACTATAGAANttt
tttttttggtcttcaaaatagatttaccttaGTAaagttttcactgtttg
ttcagtgtaataaatctattttaaaaacctgaaaaaagtttgtttacgtt
cgtttaactttataggcgcacattcaactttgactttttcatacagttgt
gatagcctacgtaataacttacgctccagtggtttggtgaaatagcccca
attctggctttccaagctaggagggaccttcctgaaggcatttaacggtg
gttagactaggcacacataCAGTCATATAGAAACattataaagtgaaagt
atatagctataaactcaaaaagtctagcttcctgaaggcacgtctctccA
TTGTCTGTGCTGTGAACACGCGAACAACTTAATGGCTTCAATcttttcag
cttggagaaaagattgcatcatgaaaaagtactatgctatgcatttgaaa
aacaatttaggcgcatttcaacttttctcgactgtacgtctgaatggacc
acaatggcattcctttatttttNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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taatgataccataatatttgaattatgtttttgaaaagcttttccagctt
ttccttaaatttaatcaaattatcAAGCTCCATGAAtccttcaagtattt
tgttaatggaatatgattattttttcaagcaattgcctcaatcaatcaat
caatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatcaatca
ataattaaatcaattaattattcttgattgtttttatgcttcaatcttta
aagcattaaaagctttataagtgcatgacatgacctttcagtgggggcat
ttaggatagtgaaagctatgactagtaagaaaaataaatatcctcatatt
gtgcgccatcctttgtttattttgtaagaactaattaccgaaaggtatat
caccgtctgtCAAGAGTTTTTggtttaattcttataaagtatatgcttat
aagaaaataaagaaaaaatcaaaaatgtgaagctaaagacacaaagatat
atgacgtaatccaaagaaaacctgcgaaaatcgtccgtggttatacgagc
gtgtaatttgtaaattaaatttagtgagttcgtccaccgtatcgagtact
ttcgttttctaattttttttccgatgacaccaacaccgccgccgcgaaag
gctatcgtaatactttcgctaggcgaaattaaaaatataatatgCTCAAA
ACACGAATCTTATGAAACAGGGTAATGACCAACactttctttaaatttct
aAGCCCAAAtactagactatgctatagtctaagacaaatcactatccaAG
AAATAAGCCCGGTggagccgaagaaaattcgcaaacgggttttttgccga
aaagagtttacaatCGGTAGTGTTTgccagtcttcgaaactctcgGCGAT
TTTTTCCCCTTATACCGCCATAACACCATGCCTTTACTATACTACCCAAC
AAATACTAACCAGACTCATCTCGTACTCAGGAAACTtgcaccatagtata
agaaagccgcggctggaatgatgacatctgaatttctgttgttctatctc
tgtcgtattttaTGACTATTTGTttatcaagaaatcagtaatgtagtatc
tttaatggtaaattttattaatttttcgttaatacttacttctcagtgcg
ttttagacattaatgatatgcccttgataatacacttgcattataaaatc
attgttaatgaaagatcaacaataagaaatttaaacaagcacaaaatggc
tgggctgaaagaactcaaaaattaataaagtgcctcgaatgccttcacaa
tattttagtaaaatctttttagaaatcaatgaaaaagtacattaagataa
tactgtgaaaatttcaaaccagtaccttcaaaatttatcattcaaactga
caggaaagttgtcatcttgaatgtagttcttataatttcaattttggcaa
aaaacaaTTGTTTCCACAAAACACCCCTAAATATATCCAAAATTAGTTCG
AGtattctattgggtacagattcaaagatatttagcaataaaaaaacttt
ttgtgaaaaggaaaataagagaaaaatttcaaaaactatctaccactaat
aaactgacaatcttgatattcttataaagctcggagacagagatggaaca
gcaattaactgaaaagaggatgcggtacatattccagccgcagctttctt
atactatgcttgcACTACCTTTTGTTACAATCATAAGAAGATTGAACTAA
GGGGTTGGGTACTGTTTCGAGTCAAAAAGCACGATTTGTATTTTAGAAAT
CGTTCGGCATTTTTCGTACAACGAAATCATCAGTTGAATACGTAGGGGAG
ACGGTACCGTCAAATGGGACAGCGAAAGACACGGCGTTCACGACGTCTGC
CGGGGTTGCTCTGACCAGTTTTAGAATACCGAACGAAGACATCTTCAACA
AGCAGCGTTTAGTATTGGTAAAGGTAAAGGCTTATTcgttgtttataaga
acatggcTTCAATGATCAAAATATGAAGAACaactttaagaacatttaaa
acattcaatttctCAGCAAAGTCTTTGTTCTTAGGAAATTACACAAAACA
TAaaccacaaaatttaaaaacttaaaatttatttcaacgTTCAAACAGCT
AACACAGCTGGACACAGTAAGGGGACGTCggaacgacgttgtgtgccgag
CCTCCCCCTTACAATGGTCAATTATACTTAGAGGCATTTAACACGTTCAA
ATATTTTTACTCGGTGAAGGTAGAAAATACTATAAACAACTCACCAAAAA
CTCACTCGGTGGATATTGAACACTCAATATTCACCGAAtgtaatgttttt
tatttgaaaatataccTGTAAACATCAAggtttctaattttcactttcgt
tttcaaggctcagcaaaagtgatgacgtcacatgagCATCAgtaaaatgg
tcaaattttttCTCACCACTCATTGTTACGATTTTATGGATCTAAttgat
cattttgaaaaaattagtttgctTGTAACAAGTCTGCGCACACGAAGGAT
GTTTTCAGAGCAAAGTTGCTCTCACTATTTGATTTGTGTCTTTCTTTCCT
TCAGAGTTTCAACACAAATGGAAGCAATATAAACGATCCTTGCGGAGAAA
AAGGATCCGTGAAAA

Coding sequence (CDS) from alignment at sc0000555:200819..212833+

>TCONS_00025934 ID=TCONS_00025934|Name=TCONS_00025934|organism=Clytia hemisphaerica|type=CDS|length=5754bp|location=Sequence derived from alignment at sc0000555:200819..212833+ (Clytia hemisphaerica)
atGCATCCGTTTGTCCGCCAGACAACAGTCACGTCCGCTTTGGGTCGCCA
GTCGACGTTTGATTTGCTTGATGATGAAGTCTTGTTAAGCACAGATGACA
AAAAACGCAGGAAAAGACTAACTCGTCGTGGTGTTTTGATTCTTATCTTG
GGATCGTTCATTGTTCTTTGCGCTGCTGGAGGTCTGGGAACAATGGCTTA
TTTTCATAAGAAGGCGTGGCACCGTGTGAAATACGGTCGCCTTGCAATGG
TACTAGATGCTTCACCAAATAACAATGCAAAAATCACAATGCATTTGTAC
GAATTGTCGGCGAAAGATCGAATATCTGAAATTAATCAATCTGCATGTCA
GGgTCTAAAACCCAAGCAAATTACCTTATGTATCAATCAAACGCTCAAAG
ATTATTCTGATATTGGTCCTAAAATTCCGCTGCACGTGCTTCATAGAAAA
GGCGCAAATGAAAGTATGATGGCCTACTTGAAGGGGAATCTGACCAATCA
AATATCGCCACCAAGTTTTGAAGAAGTTGATGAAAacaaaaagctgattt
ttttgtGGTTAACGATTTATCGAAATCTGAAATCGAAATCGTTCGGCATT
TTTCGTACAACGAAATCATCAGTTGAATACGTAGGGGAGACGGTACCGTC
AAATGGGACAGCGAAAGACACGGCGTTCACGACGTCTGCCGGGGTTGCTC
TGACCAGTTTTAGAATACCGAACGAAGACATCTTCAACAAGCAGCGTTTA
GTATTGGTAAAGAGTTTCAACACAAATGGAAGCAATATAAACGATCCTTG
CGGAGAAAAAGGATCCGTGAAAatGCATCCGTTTGTCCGCCAGACAACAG
TCACGTCCGCTTTGGGTCGCCAGTCGACGTTTGATTTGCTTGATGATGAA
GTCTTGTTAAGCACAGATGACAAAAAACGCAGGAAAAGACTAACTCGTCG
TGGTGTTTTGATTCTTATCTTGGGATCGTTCATTGTTCTTTGCGCTGCTG
GAGGTCTGGGAACAATGGCTTATTTTCATAAGAAGGCGTGGCACCGTGTG
AAATACGGTCGCCTTGCAATGGTACTAGATGCTTCACCAAATAACAATGC
AAAAATCACAATGCATTTGTACGAATTGTCGGCGAAAGATCGAATATCTG
AAATTAATCAATCTGCATGTCAGGgTCTAAAACCCAAGCAAATTACCTTA
TGTATCAATCAAACGCTCAAAGATTATTCTGATATTGGTCCTAAAATTCC
GCTGCACGTGCTTCATAGAAAAGGCGCAAATGAAAGTATGATGGCCTACT
TGAAGGGGAATCTGACCAATCAAATATCGCCACCAAGTTTTGAAGAAGTT
GATGAAAacaaaaagctgatttttttgtGGTTAACGATTTATCGAAATCT
GAAATCGAAATCGTTCGGCATTTTTCGTACAACGAAATCATCAGTTGAAT
ACGTAGGGGAGACGGTACCGTCAAATGGGACAGCGAAAGACACGGCGTTC
ACGACGTCTGCCGGGGTTGCTCTGACCAGTTTTAGAATACCGAACGAAGA
CATCTTCAACAAGCAGCGTTTAGTATTGGTAAAGAGTTTCAACACAAATG
GAAGCAATATAAACGATCCTTGCGGAGAAAAAGGATCCGTGAAAatGCAT
CCGTTTGTCCGCCAGACAACAGTCACGTCCGCTTTGGGTCGCCAGTCGAC
GTTTGATTTGCTTGATGATGAAGTCTTGTTAAGCACAGATGACAAAAAAC
GCAGGAAAAGACTAACTCGTCGTGGTGTTTTGATTCTTATCTTGGGATCG
TTCATTGTTCTTTGCGCTGCTGGAGGTCTGGGAACAATGGCTTATTTTCA
TAAGAAGGCGTGGCACCGTGTGAAATACGGTCGCCTTGCAATGGTACTAG
ATGCTTCACCAAATAACAATGCAAAAATCACAATGCATTTGTACGAATTG
TCGGCGAAAGATCGAATATCTGAAATTAATCAATCTGCATGTCAGGgTCT
AAAACCCAAGCAAATTACCTTATGTATCAATCAAACGCTCAAAGATTATT
CTGATATTGGTCCTAAAATTCCGCTGCACGTGCTTCATAGAAAAGGCGCA
AATGAAAGTATGATGGCCTACTTGAAGGGGAATCTGACCAATCAAATATC
GCCACCAAGTTTTGAAGAAGTTGATGAAAacaaaaagctgatttttttgt
GGTTAACGATTTATCGAAATCTGAAATCGAAATCGTTCGGCATTTTTCGT
ACAACGAAATCATCAGTTGAATACGTAGGGGAGACGGTACCGTCAAATGG
GACAGCGAAAGACACGGCGTTCACGACGTCTGCCGGGGTTGCTCTGACCA
GTTTTAGAATACCGAACGAAGACATCTTCAACAAGCAGCGTTTAGTATTG
GTAAAGAGTTTCAACACAAATGGAAGCAATATAAACGATCCTTGCGGAGA
AAAAGGATCCGTGAAAatGCATCCGTTTGTCCGCCAGACAACAGTCACGT
CCGCTTTGGGTCGCCAGTCGACGTTTGATTTGCTTGATGATGAAGTCTTG
TTAAGCACAGATGACAAAAAACGCAGGAAAAGACTAACTCGTCGTGGTGT
TTTGATTCTTATCTTGGGATCGTTCATTGTTCTTTGCGCTGCTGGAGGTC
TGGGAACAATGGCTTATTTTCATAAGAAGGCGTGGCACCGTGTGAAATAC
GGTCGCCTTGCAATGGTACTAGATGCTTCACCAAATAACAATGCAAAAAT
CACAATGCATTTGTACGAATTGTCGGCGAAAGATCGAATATCTGAAATTA
ATCAATCTGCATGTCAGGgTCTAAAACCCAAGCAAATTACCTTATGTATC
AATCAAACGCTCAAAGATTATTCTGATATTGGTCCTAAAATTCCGCTGCA
CGTGCTTCATAGAAAAGGCGCAAATGAAAGTATGATGGCCTACTTGAAGG
GGAATCTGACCAATCAAATATCGCCACCAAGTTTTGAAGAAGTTGATGAA
AacaaaaagctgatttttttgtGGTTAACGATTTATCGAAATCTGAAATC
GAAATCGTTCGGCATTTTTCGTACAACGAAATCATCAGTTGAATACGTAG
GGGAGACGGTACCGTCAAATGGGACAGCGAAAGACACGGCGTTCACGACG
TCTGCCGGGGTTGCTCTGACCAGTTTTAGAATACCGAACGAAGACATCTT
CAACAAGCAGCGTTTAGTATTGGTAAAGAGTTTCAACACAAATGGAAGCA
ATATAAACGATCCTTGCGGAGAAAAAGGATCCGTGAAAatGCATCCGTTT
GTCCGCCAGACAACAGTCACGTCCGCTTTGGGTCGCCAGTCGACGTTTGA
TTTGCTTGATGATGAAGTCTTGTTAAGCACAGATGACAAAAAACGCAGGA
AAAGACTAACTCGTCGTGGTGTTTTGATTCTTATCTTGGGATCGTTCATT
GTTCTTTGCGCTGCTGGAGGTCTGGGAACAATGGCTTATTTTCATAAGAA
GGCGTGGCACCGTGTGAAATACGGTCGCCTTGCAATGGTACTAGATGCTT
CACCAAATAACAATGCAAAAATCACAATGCATTTGTACGAATTGTCGGCG
AAAGATCGAATATCTGAAATTAATCAATCTGCATGTCAGGgTCTAAAACC
CAAGCAAATTACCTTATGTATCAATCAAACGCTCAAAGATTATTCTGATA
TTGGTCCTAAAATTCCGCTGCACGTGCTTCATAGAAAAGGCGCAAATGAA
AGTATGATGGCCTACTTGAAGGGGAATCTGACCAATCAAATATCGCCACC
AAGTTTTGAAGAAGTTGATGAAAacaaaaagctgatttttttgtGGTTAA
CGATTTATCGAAATCTGAAATCGAAATCGTTCGGCATTTTTCGTACAACG
AAATCATCAGTTGAATACGTAGGGGAGACGGTACCGTCAAATGGGACAGC
GAAAGACACGGCGTTCACGACGTCTGCCGGGGTTGCTCTGACCAGTTTTA
GAATACCGAACGAAGACATCTTCAACAAGCAGCGTTTAGTATTGGTAAAG
AGTTTCAACACAAATGGAAGCAATATAAACGATCCTTGCGGAGAAAAAGG
ATCCGTGAAAatGCATCCGTTTGTCCGCCAGACAACAGTCACGTCCGCTT
TGGGTCGCCAGTCGACGTTTGATTTGCTTGATGATGAAGTCTTGTTAAGC
ACAGATGACAAAAAACGCAGGAAAAGACTAACTCGTCGTGGTGTTTTGAT
TCTTATCTTGGGATCGTTCATTGTTCTTTGCGCTGCTGGAGGTCTGGGAA
CAATGGCTTATTTTCATAAGAAGGCGTGGCACCGTGTGAAATACGGTCGC
CTTGCAATGGTACTAGATGCTTCACCAAATAACAATGCAAAAATCACAAT
GCATTTGTACGAATTGTCGGCGAAAGATCGAATATCTGAAATTAATCAAT
CTGCATGTCAGGgTCTAAAACCCAAGCAAATTACCTTATGTATCAATCAA
ACGCTCAAAGATTATTCTGATATTGGTCCTAAAATTCCGCTGCACGTGCT
TCATAGAAAAGGCGCAAATGAAAGTATGATGGCCTACTTGAAGGGGAATC
TGACCAATCAAATATCGCCACCAAGTTTTGAAGAAGTTGATGAAAacaaa
aagctgatttttttgtGGTTAACGATTTATCGAAATCTGAAATCGAAATC
GTTCGGCATTTTTCGTACAACGAAATCATCAGTTGAATACGTAGGGGAGA
CGGTACCGTCAAATGGGACAGCGAAAGACACGGCGTTCACGACGTCTGCC
GGGGTTGCTCTGACCAGTTTTAGAATACCGAACGAAGACATCTTCAACAA
GCAGCGTTTAGTATTGGTAAAGAGTTTCAACACAAATGGAAGCAATATAA
ACGATCCTTGCGGAGAAAAAGGATCCGTGAAAatGCATCCGTTTGTCCGC
CAGACAACAGTCACGTCCGCTTTGGGTCGCCAGTCGACGTTTGATTTGCT
TGATGATGAAGTCTTGTTAAGCACAGATGACAAAAAACGCAGGAAAAGAC
TAACTCGTCGTGGTGTTTTGATTCTTATCTTGGGATCGTTCATTGTTCTT
TGCGCTGCTGGAGGTCTGGGAACAATGGCTTATTTTCATAAGAAGGCGTG
GCACCGTGTGAAATACGGTCGCCTTGCAATGGTACTAGATGCTTCACCAA
ATAACAATGCAAAAATCACAATGCATTTGTACGAATTGTCGGCGAAAGAT
CGAATATCTGAAATTAATCAATCTGCATGTCAGGgTCTAAAACCCAAGCA
AATTACCTTATGTATCAATCAAACGCTCAAAGATTATTCTGATATTGGTC
CTAAAATTCCGCTGCACGTGCTTCATAGAAAAGGCGCAAATGAAAGTATG
ATGGCCTACTTGAAGGGGAATCTGACCAATCAAATATCGCCACCAAGTTT
TGAAGAAGTTGATGAAAacaaaaagctgatttttttgtGGTTAACGATTT
ATCGAAATCTGAAATCGAAATCGTTCGGCATTTTTCGTACAACGAAATCA
TCAGTTGAATACGTAGGGGAGACGGTACCGTCAAATGGGACAGCGAAAGA
CACGGCGTTCACGACGTCTGCCGGGGTTGCTCTGACCAGTTTTAGAATAC
CGAACGAAGACATCTTCAACAAGCAGCGTTTAGTATTGGTAAAGAGTTTC
AACACAAATGGAAGCAATATAAACGATCCTTGCGGAGAAAAAGGATCCGT
GAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014585XLOC_014585Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025934-proteinTCONS_00025934-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025934-exon-sc0000555-1491911889:200819..200935TCONS_00025934-exon-sc0000555-1491911889:200819..200935Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1510915933:200819..200935TCONS_00025934-exon-sc0000555-1510915933:200819..200935Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1575043694:200819..200935TCONS_00025934-exon-sc0000555-1575043694:200819..200935Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1491911889:201356..201549TCONS_00025934-exon-sc0000555-1491911889:201356..201549Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1510915933:201356..201549TCONS_00025934-exon-sc0000555-1510915933:201356..201549Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1575043694:201356..201549TCONS_00025934-exon-sc0000555-1575043694:201356..201549Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1491911889:202010..202122TCONS_00025934-exon-sc0000555-1491911889:202010..202122Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1510915933:202010..202122TCONS_00025934-exon-sc0000555-1510915933:202010..202122Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1575043694:202010..202122TCONS_00025934-exon-sc0000555-1575043694:202010..202122Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1491911889:202463..202580TCONS_00025934-exon-sc0000555-1491911889:202463..202580Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1510915933:202463..202580TCONS_00025934-exon-sc0000555-1510915933:202463..202580Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1575043694:202463..202580TCONS_00025934-exon-sc0000555-1575043694:202463..202580Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1491911889:202857..202968TCONS_00025934-exon-sc0000555-1491911889:202857..202968Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1510915933:202857..202968TCONS_00025934-exon-sc0000555-1510915933:202857..202968Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1575043694:202857..202968TCONS_00025934-exon-sc0000555-1575043694:202857..202968Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1491911889:203237..203357TCONS_00025934-exon-sc0000555-1491911889:203237..203357Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1510915933:203237..203357TCONS_00025934-exon-sc0000555-1510915933:203237..203357Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1575043694:203237..203357TCONS_00025934-exon-sc0000555-1575043694:203237..203357Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1491911889:211965..212141TCONS_00025934-exon-sc0000555-1491911889:211965..212141Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1510915933:211965..212141TCONS_00025934-exon-sc0000555-1510915933:211965..212141Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1575043694:211965..212141TCONS_00025934-exon-sc0000555-1575043694:211965..212141Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1491911889:212773..212833TCONS_00025934-exon-sc0000555-1491911889:212773..212833Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1510915933:212773..212833TCONS_00025934-exon-sc0000555-1510915933:212773..212833Clytia hemisphaericaexon
TCONS_00025934-exon-sc0000555-1575043694:212773..212833TCONS_00025934-exon-sc0000555-1575043694:212773..212833Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000555supercontigsc0000555:200819..212833 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.27967	0.860607	1.09917	0.928727	0.178521	0.0940466	0.34039	0.159334	0.0371846	0.0460591	0.0447061	0.117552	0.117389	0.213341	0.300678	0.188226	3.94195	3.05574	0.0469075	0.0490853	8.27683	6.92974	5.00887	6.76169	4.31128	10.5706	1.21013	0.645739	0.293862	0.299399
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00025934 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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