TCONS_00025970 (transcript) - C. hemisphaerica

Overview
NameTCONS_00025970
Unique NameTCONS_00025970
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1295

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00025970 ID=TCONS_00025970|Name=TCONS_00025970|organism=Clytia hemisphaerica|type=transcript|length=1295bp
ccgaggaaaaaaagaaaattaacatTACATAAAACGATAAAAGTACAATC
AAGAAATATTCAAAGGACATGACTGAAACTCGCAAGTCTATGGAAAAGAT
TGGCTGTGAATTTAATTTGTTGCTAGCAGCAACTGGGAGCGTGGCAACCA
TCAAGATACCCTTATTGgtcaaaaagttgaaagaaaaatttggaAAGATT
TCCATCAAATTGATTTTGACAAAGAATGCGGAATTTTTCATTAAACCAGA
AGAAAAGGAGGACATGGAATCGTTGTGTGGTTGTCAAATCTACAGAGATG
AAGATGAATGGAGTAGCTGGAAGAAAATAGGAGACCCGATTCTTCACGTA
GATttgATGAAATGGGCGGATGTGCTCTGCATTGCTCCATTAGATGCCAA
TACTATGGCCAAGTTATCAAACGGGATTTGCGATAACATGCTATGCTCAC
TATGCCGTGCATGGGATTTCAAAAAACCAATACTAATTGCGCCCGCTATG
AACACCCTGATGTGGAGCCACCCTTTGACGTCATTACATGTCCAAACCTT
GTTGTCATGGGGATATAAGTTAATAGCACCGATTTCCAAGAAGCTTGCAT
GTGGAGATACAGgCGTTGGCGCGATGGCCGAGGTAGATGAAATCATAAAT
TTGATTGAACTGTCGATGACGTAATCATTATTCCGATAAAACCAATCTGT
GATATGTTGGATTGTGTAACAATTTTAAACTCGATATCGAGTTAACATTA
TGAGTTCGATCGCGGGCTTTCGATGGCATAGAGCAAGTAGATACCGCATG
TTTCGAGTGTGGAAGTAAATAATTGGATAAGCTGATGTGACATTTATTTA
ACAGATTCAAGCgtagtttttaattttcaattcaatctTAAAGTTCTAAC
AGTGTTTTCTAGGTTTAGCGAGCTACAACAATTTTCTATCGCAATCTACT
GAGAGAAAGAATCGTATTTATATCTGGATCGAAAATAACAATTACCACTC
TCCAATTCAACAAAGTTCTAACTCGCGTCTTTTAAATAGAATTTCGTTGC
CACTTTATAGCGCCGTGTGTGTTCGTGAGATTAATTTTTACCATTGAACA
AGATTCTATCGAAAAAAGGTGGATAAAGGTTATTTTCAGATAGAGCTTTG
TTGAATTTATGCAGTTTTAGTAATTTGAAGCCttaatattttagattcaa
tattttttattaaattagGTATCTGAAGAGTACAGTAGGTACTAAATTTA
TTTAGTGAGCTCAAAAGTATATCATAAaagcaatatcatcttttt
Run BLAST on NCBI

protein sequence of TCONS_00025970-protein

>TCONS_00025970-protein ID=TCONS_00025970-protein|Name=TCONS_00025970-protein|organism=Clytia hemisphaerica|type=polypeptide|length=201bp
MTETRKSMEKIGCEFNLLLAATGSVATIKIPLLVKKLKEKFGKISIKLIL
TKNAEFFIKPEEKEDMESLCGCQIYRDEDEWSSWKKIGDPILHVDLMKWA
DVLCIAPLDANTMAKLSNGICDNMLCSLCRAWDFKKPILIAPAMNTLMWS
HPLTSLHVQTLLSWGYKLIAPISKKLACGDTGVGAMAEVDEIINLIELSM
T
Run BLAST on NCBI

transcript from alignment at sc0000556:101499..109042-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00025970 ID=TCONS_00025970|Name=TCONS_00025970|organism=Clytia hemisphaerica|type=transcript|length=7544bp|location=Sequence derived from alignment at sc0000556:101499..109042- (Clytia hemisphaerica)
CCGAGGAAAAAAAGAAAATTAACATTACATAAAACGATAAAAGTACAATC
AAGAAATATTCAAAGGACATGACTGAAACTCGCAAGTCTATGGAAAAGAT
TGGCTGTGAATTTAATTTGTTGCTAGCAGCAACTGGGAGCGTGGCAACCA
TCAAGATACCCTTATTGGTCAAAAAGTTGAAAGAAAAATTTGGAAAGGTA
TTCATAGTTCTTCAAAGTTTTTCTTCTTCCGTTATTCAGTGTGTCTGGAA
AAAGATGGAAAAAGTAAGTGAAAATTTACAGGAAAAGTTTCTCAGCTTCG
ATTCGTCAAATATCCTTCAAGCTCGAATGAATTTTTTTCGATATCCGATT
TTTCTTGTCGAATATCTACTTATTATTCTCAGCTCCAGTAATGTTAATGG
GTAATGTTTTGGACAAACTGTGAGTGTGAATTTTTGTGTGGAATAGTTAT
TTTACTAATATGCATGTTGAATCTAAGTTAGTTTTTATATTTTCCTACCG
ATAGATTTCCATCAAATTGATTTTGACAAAGAATGCGGAATTTTTCATTA
AACCAGAAGAAAAGGAGGACATGGAATCGTTGTGTGGTTGTCAAATCTAC
AGAGATGAAGATGAATGGAGTGTAAGTGGACGGGGGGGGTGGCACTTACG
TTAAAGATAAGTTTGCGTTTTTCAGCCTTCCAAGAGTACACTCCAAATGT
GTAAGAGGTGAGGAAAACGACTTTTTTAGAGCAAAATTTTGGAAATCTAA
CTTTTCTTGCCTTAAAATAGAAAAGGAAATGTCAAGAAAATACATCGCAA
GGATAGATTTTTCGCATAAATTTACTCAAATTTTTGGCAAAATTTTCTCA
GCCACTAACCTTATTTTGGGCTGCACGTACGGTCGTTTTTTAATCAAGTG
CCCCTTCTGGACGTTGTAATCGTCCGGTACAGGGGTAGTAATAGACTGGA
GTCGTTTATAATCCGATTGATACAGTATTATGTGTGTTATATAATAATAC
GATAATTGATACAGGATCTTATTAGATTTTTACATGTTTTCATTTTTATT
GTTTATTTTCTACCATGCCGAATTACTAGAGTAGTAAGCGCGGGAAAATA
ATCATGCCCTATTCCAACGGGAAAAGACACTATGATTCTCTCCGCTGGAT
ACACGCTTTTTTTAAGGAATACCCTAAGAATACCCTCTAGGGTGAATTTC
TTAGAATTTGATAAGAATATAGTCATTTTGTATTTGGTTAACAGAAAAAA
CTGTTTCCTTTTTTACAGATAAATTGAAACTTTGAGGAAGAAATGTAATT
TTAACCTAAATGTTCACTCGATAGTCCAAAACTCTCAAATTGATCATTTC
TCATGTTTGTAAAAAAAGTCGAGTCTAAAAAAGTAATAATGCGTTATGTG
ATTTTCCATCCCCATTGGCATTAGGGTTCTCGATTTTATCTATACAGAGT
ATAAAAGTTTTAAGGGTCATTAACACAGGGTTGTTTCATTACTTTTTAAT
GTTTTTCTTTGTATATAGAGCTGGAAGAAAATAGGAGACCCGATTCTTCA
CGTAGATGTAAGTAATATTAGATGCAATACCGAATCAATTCACTTTTGTA
TTACTTCCACAAATTTCGAAATATGTTGTTTTATCAAATTGGGGGCGTAC
GAGGATGGTATCCTACCCAATAACGCCTACTAAAATATAAATCCCAAAAT
CTTATAAGTATAAGACTTCTATAGAGTACCTTATAAATAAGGGATCAGTA
TGCCCGGACATAAGTATGCCCGGACATCAGGTTGTCGAATAAGAAGGTCT
CTTGGTAGAAAAATGGAACACGAGGCTTATTTCAATGTTATAGATCCTCT
CAGACGGATTTCTGTCTCAGTTGAGCCAGAAAATTCTGCTTGCTTTACCA
AAATTTCAAGAATACGTGCTCCATTTTCTGGCTCAAATATAAAATCTTGC
TATGACCACTGGAACATAGAAGGCTTTTGAAAAAACGAAAAAATGAAGAA
AGAAATGCTTATTACAGTAGGTATTCATGATATGCACCATTGCAATGTCT
TCTGACATTACATCACGGACCCAATAGCTGATTGGTTGTAAGTGACGTAA
AATCAGTCAATATGTCACTTTCAACCAATCAGCTGTTGGGTCCGTGGAAG
ACATTGCAATGGTGCATATCATCAATACTGGAGAGGAATGATCTTCAGTG
CTTGATTTTACTTTCTTTCTTGAAATTACGCATCATTTCTCTTTTTTTTT
TACAGTTGATGAAATGGGCGGATGTGCTCTGCATTGCTCCATTAGATGCC
AATACTATGGCCAAGTTATCAAACGGGATTTGCGATAACATGCTAGTAGG
TCTTCTAAGTTTCAGAAGAAATTAACTTTGGGCACTTTGGGGACATTTTA
TGATGGCGTCAATTAAAGTGTATCCAGATATGATTGGTAGTGGAAACAAG
AATGTCTGTAACTTTCGATAGTCCGATATAATTTCGAAAATCTTTTTTGT
TTGTTTTAGAGAATCAAAAGCTCTATATTTGAACGTATTTTTGGTTGAAA
AATTCGCGATTTTTAGCAGTTAAATTTGCAACTGTAAAAGTCAGGTATTT
TTATACTTATGCTACAACGTTCATTTTTACACATTGGTAGTTCAACCTTA
GGTTAAGAAGGTTGTGAAAATTTCAAGGCAAACGGAAAAGTCCTTCCGAA
GATATGGGACCCGAAATATAGTAGGGGGAAATTTGTTCGTTTTTTTGAGG
TCGCTCGATTTTTTTAGTCAAAGCACTTGTTATACATTTTTGGAAAGCTA
AGGGGTAGGGGAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTCAGTACCTAACTCGAGATAT
TGAGCTTCCGAAAGCGCAAAAACTGGACAAAACAGCTGTTTCTGGCTGAA
AAACACTGAAAAACACTGTTTTTAAGGATTTCCAAAAATGTATAACAAGT
GCTTTGACTAAAAAAATCGAGCGATTTTACAAATTTCCCCCTACTAATAC
CCCTTGCTAGAACTTTTCTGTGAAACATCAAATCTCAAAATTTTTAATAA
AAACGGGGGTAGTGATGATAAAACAGTTTTCCAATCATAACACATTTTAC
AATCTTTGTAAAACTATTTTTGGAATTAGCAAAGTTCTTTAATTATTTAA
ATTATTTAAAAAAAAGGCAATATAAGTTCAATATGCTTATCATTTCAATA
AAAACAGCCATACTGTGATTTCACCATGTTTCGAAATAATCAATGATGCT
AATAAATAATACCAATGCATCGACACTTTTCAACTTTAAATTTCACTGTT
CAAAACTGTTCCGTTTTTTGTAAATATTTTGAGATTTGATATTTCACAGA
AAAGTGCTAGCAAGGGGTATTTCAGGTCCCATATCGTCCAAAGGACTTTT
CCGTTTGCCTTGAAATTTCACAACCTTCTTAACCTAAGGTTGAACTACCA
ATGTGTAAAAATAAACGTTGTAGCATAAGTAGAAAAAAAAGTTCAATTTT
TGCAATCGCAAATTTAACTGCCAAAAATCGCGAATTTTTCAGCCAAAAAT
ACATTCAAATATAGCACTTTTGATTCTCTAAAACAAAAAAAAATATTTAT
ACAATTATATTTGACTATCAAAAGTTACAGGCATTCCTGTTTCCACTGCC
AATTGTATCTGGATAAACTTTAAGTGAATTCATTCCTTTGATATACAATA
AGTAGTAAGAGGCTCAAGCTGAAATATAAAAATGACTAAGAATAAAACGA
ACTAGTATGGTGTTGGAATAGGTGGGAACGTAATTTGATTTTAACCGAAA
CCTTCTTTTGGAAGTAAACCTTTTAGTTAGTCGACGAAGTCATTTATTAG
CGCACCATATACAGCGTGTCCCAAAAAAGCGGACAAACTTTTACATAAAG
TAAAATCCTCGTAATTTATGCAAAAATTTAATTACTTGAATACTGAATAT
TATATGTTGAAAACCTCTTCAATCATCATTGGGATTGATTATCTGTTGAT
TAAGTAGAGAATTTTGATCTTATTTCATTTATTCTAAGCCCAAATCGGAT
AATGAGTTTTGAGGATATTTACTTTGTATAAATATTTGTCTGATTTTTTT
TGAGACACAATGTATGTTTTATAGTGCTCACTATGCCGTGCATGGGATTT
CAAAAAACCAATACTAATTGCGCCCGCTATGAACACCCTGATGTGGAGCC
ACCCTTTGACGTCATTACATGTCCAAACCTTGTTGTCATGGGGATATAAG
TTAATAGCACCGATTTCCAAGAAGCTTGCATGTGGAGATACAGGTATATA
AAAATTACTTCCCTCGAGCTGCATCGATTTATCCTCCTTTTTCAAAAAAA
CAGATGACACTCTCTAATTCGATTTTCATAAAGGAGTGTACAGAATATGT
AGTAGAGCTTCGTTTCGGAGAGTTTTTTGTTGACGGTGTCTTTCAATAAT
AATCGAATAATAGAACGTCGAATGGGCTCTTCCAGAACGCTTTTGTACGT
GGGTTGAGGATATATTGGATATTTTGTCGGGGGGGGGGNTCCGGGGGTCA
ACTGATGCTTGTCTTGGGGTGAGAACTGTTGTCCGGGGGTCATAATTCAC
AATGTCCGCGGGGTAAATTTCCAAAACAATGTTATATCCTCTAACCCCCA
TGTTCATTTTTTTTTCTGGGAGAGCGTCAACTGTATAGGGGTCCTCCCTA
TTGATAATTAATAAATGAATGATCAGGGTTAGAATTGTTTGGAAAGCCCA
TCATTAGAATTCGGTATAAAACATGTCCACAAAAAGGCGGGCAAACTTTT
GTAAAAAGTAAAATGCGAAATTTTACATACCTTATCGGGGAAAAATTCGT
CGGGGAAAAGTGACGAAATTTCGGCCAAGTGACGAATAATTTTCCCTGAC
GAAAATTTTCCCCGACCTTAATGCGTTTACCAACTACCAGCAAGTGACGA
ATATTTTTCCCCGACGAAAATTTTCTCCGACGAAGTTTTCCCCGATAAGG
TACTTAATATTTAGATCGGGACCATTCAAAAAGTACGTACGTTCGAAAAT
GGCAAATTTTTTACTTCCATCCCCCATTGTACGCTTCCGTACGCTTTATG
TGTACCCCTCCCTTCAGCGTACGTACGCTTTTTAGTACACACCCCCCTCC
CCTAACCAAAGGCGAAACTTGAAACTCTTGTAACAGTAGAATATGTAAGG
TATCCAATCGTATTTATAACAAAGTCTCAAAAAATTAAAAGAATGNCTCT
TGTAACAGTAGAATATGTAGGTATCCAATCGTATGTATAACAAAGTCTCA
AGAAATTAAAAGAATGTATAAGATGAACAAAAATACCAAAGGAGAAATGA
AAAATAACAATCGCAAAAACAATTTTTTGATGTGAAAATATTGCGTTTTT
CTCTCAAAAAAATAAAATAACGTTGTTTAATTTGACAACCTTTTTTAGGT
TTTTGAGAATCCATCCAACTTTTTTGACTAAATGATGTTTCATAGTAACA
TAAAACATGGGAACATATAAATAAATGAGCATTTCTAAAAACGCAATAAA
CAGAAAGAAAAATAAATGCAATCCCGCACGGGTCAGACATACAGAAATCN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCTTACGATTTTAGGTGAAGAAAAAAAGGCGTTGGAA
GTAGCTTCTAGTCGGTTATTTTCCTTTTCTCTCACGCGCGCTGAATATTT
AATTAGTGTTTACGTTATTTGATTGACAGTTTTATTATAAGGTTATAAGT
AATAACTGACTAGTTTACTAGTCTACCCTCGTACGCTTTCGAACGCTTTT
GGGAGTATCCCCCCTCCCCCTCTCGAGCGTACGTACTTTTTGAATGGTCC
CATCACAAAAACCAAATGAATATCAGTTAATTGAACATAGAAACAAAATT
GATTTTTTTAGGCGTTGGCGCGATGGCCGAGGTAGATGAAATCATAAATT
TGATTGAACTGTCGATGACGTAATCATTATTCCGATAAAACCAATCTGTG
ATATGTTGGATTGTGTAACAATTTTAAACTCGATATCGAGTTAACATTAT
GAGTTCGATCGCGGGCTTTCGATGGCATAGAGCAAGTAGATACCGCATGT
TTCGAGTGTGGAAGTAAATAATTGGATAAGCTGATGTGACATTTATTTAA
CAGATTCAAGCGTAGTTTTTAATTTTCAATTCAATCTTAAAGTTCTAACA
GTGTTTTCTAGGTTTAGCGAGCTACAACAATTTTCTATCGCAATCTACTG
AGAGAAAGAATCGTATTTATATCTGGATCGAAAATAACAATTACCACTCT
CCAATTCAACAAAGTTCTAACTCGCGTCTTTTAAATAGAATTTCGTTGCC
ACTTTATAGCGCCGTGTGTGTTCGTGAGATTAATTTTTACCATTGAACAA
GATTCTATCGAAAAAAGGTGGATAAAGGTTATTTTCAGATAGAGCTTTGT
TGAATTTATGCAGTTTTAGTAATTTGAAGCCTTAATATTTTAGATTCAAT
ATTTTTTATTAAATTAGGTATCTGAAGAGTACAGTAGGTACTAAATTTAT
TTAGTGAGCTCAAAAGTATATCATAAAAGCAATATCATCTTTTT

Coding sequence (CDS) from alignment at sc0000556:101499..109042-

>TCONS_00025970 ID=TCONS_00025970|Name=TCONS_00025970|organism=Clytia hemisphaerica|type=CDS|length=3636bp|location=Sequence derived from alignment at sc0000556:101499..109042- (Clytia hemisphaerica)
GCGTTGGCGCGATGGCCGAGGTAGATGAAATCATAAATTTGATTGAACTG
TCGATGACGTAATGCTCACTATGCCGTGCATGGGATTTCAAAAAACCAAT
ACTAATTGCGCCCGCTATGAACACCCTGATGTGGAGCCACCCTTTGACGT
CATTACATGTCCAAACCTTGTTGTCATGGGGATATAAGTTAATAGCACCG
ATTTCCAAGAAGCTTGCATGTGGAGATACAGTTGATGAAATGGGCGGATG
TGCTCTGCATTGCTCCATTAGATGCCAATACTATGGCCAAGTTATCAAAC
GGGATTTGCGATAACATGCTAAGCTGGAAGAAAATAGGAGACCCGATTCT
TCACGTAGATATTTCCATCAAATTGATTTTGACAAAGAATGCGGAATTTT
TCATTAAACCAGAAGAAAAGGAGGACATGGAATCGTTGTGTGGTTGTCAA
ATCTACAGAGATGAAGATGAATGGAGTATGACTGAAACTCGCAAGTCTAT
GGAAAAGATTGGCTGTGAATTTAATTTGTTGCTAGCAGCAACTGGGAGCG
TGGCAACCATCAAGATACCCTTATTGGTCAAAAAGTTGAAAGAAAAATTT
GGAAAGGCGTTGGCGCGATGGCCGAGGTAGATGAAATCATAAATTTGATT
GAACTGTCGATGACGTAATGCTCACTATGCCGTGCATGGGATTTCAAAAA
ACCAATACTAATTGCGCCCGCTATGAACACCCTGATGTGGAGCCACCCTT
TGACGTCATTACATGTCCAAACCTTGTTGTCATGGGGATATAAGTTAATA
GCACCGATTTCCAAGAAGCTTGCATGTGGAGATACAGTTGATGAAATGGG
CGGATGTGCTCTGCATTGCTCCATTAGATGCCAATACTATGGCCAAGTTA
TCAAACGGGATTTGCGATAACATGCTAAGCTGGAAGAAAATAGGAGACCC
GATTCTTCACGTAGATATTTCCATCAAATTGATTTTGACAAAGAATGCGG
AATTTTTCATTAAACCAGAAGAAAAGGAGGACATGGAATCGTTGTGTGGT
TGTCAAATCTACAGAGATGAAGATGAATGGAGTATGACTGAAACTCGCAA
GTCTATGGAAAAGATTGGCTGTGAATTTAATTTGTTGCTAGCAGCAACTG
GGAGCGTGGCAACCATCAAGATACCCTTATTGGTCAAAAAGTTGAAAGAA
AAATTTGGAAAGGCGTTGGCGCGATGGCCGAGGTAGATGAAATCATAAAT
TTGATTGAACTGTCGATGACGTAATGCTCACTATGCCGTGCATGGGATTT
CAAAAAACCAATACTAATTGCGCCCGCTATGAACACCCTGATGTGGAGCC
ACCCTTTGACGTCATTACATGTCCAAACCTTGTTGTCATGGGGATATAAG
TTAATAGCACCGATTTCCAAGAAGCTTGCATGTGGAGATACAGTTGATGA
AATGGGCGGATGTGCTCTGCATTGCTCCATTAGATGCCAATACTATGGCC
AAGTTATCAAACGGGATTTGCGATAACATGCTAAGCTGGAAGAAAATAGG
AGACCCGATTCTTCACGTAGATATTTCCATCAAATTGATTTTGACAAAGA
ATGCGGAATTTTTCATTAAACCAGAAGAAAAGGAGGACATGGAATCGTTG
TGTGGTTGTCAAATCTACAGAGATGAAGATGAATGGAGTATGACTGAAAC
TCGCAAGTCTATGGAAAAGATTGGCTGTGAATTTAATTTGTTGCTAGCAG
CAACTGGGAGCGTGGCAACCATCAAGATACCCTTATTGGTCAAAAAGTTG
AAAGAAAAATTTGGAAAGGCGTTGGCGCGATGGCCGAGGTAGATGAAATC
ATAAATTTGATTGAACTGTCGATGACGTAATGCTCACTATGCCGTGCATG
GGATTTCAAAAAACCAATACTAATTGCGCCCGCTATGAACACCCTGATGT
GGAGCCACCCTTTGACGTCATTACATGTCCAAACCTTGTTGTCATGGGGA
TATAAGTTAATAGCACCGATTTCCAAGAAGCTTGCATGTGGAGATACAGT
TGATGAAATGGGCGGATGTGCTCTGCATTGCTCCATTAGATGCCAATACT
ATGGCCAAGTTATCAAACGGGATTTGCGATAACATGCTAAGCTGGAAGAA
AATAGGAGACCCGATTCTTCACGTAGATATTTCCATCAAATTGATTTTGA
CAAAGAATGCGGAATTTTTCATTAAACCAGAAGAAAAGGAGGACATGGAA
TCGTTGTGTGGTTGTCAAATCTACAGAGATGAAGATGAATGGAGTATGAC
TGAAACTCGCAAGTCTATGGAAAAGATTGGCTGTGAATTTAATTTGTTGC
TAGCAGCAACTGGGAGCGTGGCAACCATCAAGATACCCTTATTGGTCAAA
AAGTTGAAAGAAAAATTTGGAAAGGCGTTGGCGCGATGGCCGAGGTAGAT
GAAATCATAAATTTGATTGAACTGTCGATGACGTAATGCTCACTATGCCG
TGCATGGGATTTCAAAAAACCAATACTAATTGCGCCCGCTATGAACACCC
TGATGTGGAGCCACCCTTTGACGTCATTACATGTCCAAACCTTGTTGTCA
TGGGGATATAAGTTAATAGCACCGATTTCCAAGAAGCTTGCATGTGGAGA
TACAGTTGATGAAATGGGCGGATGTGCTCTGCATTGCTCCATTAGATGCC
AATACTATGGCCAAGTTATCAAACGGGATTTGCGATAACATGCTAAGCTG
GAAGAAAATAGGAGACCCGATTCTTCACGTAGATATTTCCATCAAATTGA
TTTTGACAAAGAATGCGGAATTTTTCATTAAACCAGAAGAAAAGGAGGAC
ATGGAATCGTTGTGTGGTTGTCAAATCTACAGAGATGAAGATGAATGGAG
TATGACTGAAACTCGCAAGTCTATGGAAAAGATTGGCTGTGAATTTAATT
TGTTGCTAGCAGCAACTGGGAGCGTGGCAACCATCAAGATACCCTTATTG
GTCAAAAAGTTGAAAGAAAAATTTGGAAAGGCGTTGGCGCGATGGCCGAG
GTAGATGAAATCATAAATTTGATTGAACTGTCGATGACGTAATGCTCACT
ATGCCGTGCATGGGATTTCAAAAAACCAATACTAATTGCGCCCGCTATGA
ACACCCTGATGTGGAGCCACCCTTTGACGTCATTACATGTCCAAACCTTG
TTGTCATGGGGATATAAGTTAATAGCACCGATTTCCAAGAAGCTTGCATG
TGGAGATACAGTTGATGAAATGGGCGGATGTGCTCTGCATTGCTCCATTA
GATGCCAATACTATGGCCAAGTTATCAAACGGGATTTGCGATAACATGCT
AAGCTGGAAGAAAATAGGAGACCCGATTCTTCACGTAGATATTTCCATCA
AATTGATTTTGACAAAGAATGCGGAATTTTTCATTAAACCAGAAGAAAAG
GAGGACATGGAATCGTTGTGTGGTTGTCAAATCTACAGAGATGAAGATGA
ATGGAGTATGACTGAAACTCGCAAGTCTATGGAAAAGATTGGCTGTGAAT
TTAATTTGTTGCTAGCAGCAACTGGGAGCGTGGCAACCATCAAGATACCC
TTATTGGTCAAAAAGTTGAAAGAAAAATTTGGAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014608XLOC_014608Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025970-proteinTCONS_00025970-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00025970-exon-sc0000556-1575043694:108846..109042TCONS_00025970-exon-sc0000556-1575043694:108846..109042Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1575043694:108422..108538TCONS_00025970-exon-sc0000556-1575043694:108422..108538Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1575043694:107486..107524TCONS_00025970-exon-sc0000556-1575043694:107486..107524Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1575043694:106698..106787TCONS_00025970-exon-sc0000556-1575043694:106698..106787Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1575043694:104000..104168TCONS_00025970-exon-sc0000556-1575043694:104000..104168Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1575043694:101499..102181TCONS_00025970-exon-sc0000556-1575043694:101499..102181Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1510915933:108846..109042TCONS_00025970-exon-sc0000556-1510915933:108846..109042Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1510915933:108422..108538TCONS_00025970-exon-sc0000556-1510915933:108422..108538Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1510915933:107486..107524TCONS_00025970-exon-sc0000556-1510915933:107486..107524Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1510915933:106698..106787TCONS_00025970-exon-sc0000556-1510915933:106698..106787Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1510915933:104000..104168TCONS_00025970-exon-sc0000556-1510915933:104000..104168Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1510915933:101499..102181TCONS_00025970-exon-sc0000556-1510915933:101499..102181Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1491911889:108846..109042TCONS_00025970-exon-sc0000556-1491911889:108846..109042Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1491911889:108422..108538TCONS_00025970-exon-sc0000556-1491911889:108422..108538Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1491911889:107486..107524TCONS_00025970-exon-sc0000556-1491911889:107486..107524Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1491911889:106698..106787TCONS_00025970-exon-sc0000556-1491911889:106698..106787Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1491911889:104000..104168TCONS_00025970-exon-sc0000556-1491911889:104000..104168Clytia hemisphaericaexon
TCONS_00025970-exon-sc0000556-1491911889:101499..102181TCONS_00025970-exon-sc0000556-1491911889:101499..102181Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000556supercontigsc0000556:101499..109042 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.12344	1.68472	1.92341	1.70082	4.9931	4.2191	7.20174	8.36909	8.4457	8.66115	7.94336	5.93963	4.49741	5.07675	3.74712	4.51892	6.87125	6.06047	2.01417	3.56126	4.2582	3.69752	2.99654	2.97899	7.26042	7.94091	6.00249	3.77668	2.13745	2.62291
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003382Flavoprotein
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity
Blast
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BLAST of TCONS_00025970 vs. Swiss-Prot (Human)
Match: COAC (Phosphopantothenoylcysteine decarboxylase OS=Homo sapiens GN=PPCDC PE=1 SV=2)

HSP 1 Score: 181.8 bits (460), Expect = 5.199e-54
Identity = 86/184 (46.74%), Postives = 125/184 (67.93%), Query Frame = 3 
Query:  108 EFNLLLAATGSVATIKIPLLVKKLKEKFGKISIKLILTKNAEFFIKPEEKEDMESLCGCQIYRDEDEWSSWKKIGDPILHVDLMKWADVLCIAPLDANTMAKLSNGICDNMLCSLCRAWDFKKPILIAPAMNTLMWSHPLTSLHVQTLLSWGYKLIAPISKKLACGDTGVGAMAEVDEIINLIE 659
            +F++L+  TGSVA +K+PLLV KL +  G + + ++ T+ A+ F  P++           +Y D DEW  WK   DP+LH+DL +WAD+L +APLDANT+ K+++GICDN+L  + RAWD  KP+L  PAMNT MW HP+T+  V  L ++GY  I  ++KKL CGD G+GAMAEV  I++ ++
Sbjct:   17 KFHVLVGVTGSVAALKLPLLVSKLLDIPG-LEVAVVTTERAKHFYSPQD-------IPVTLYSDADEWEIWKSRSDPVLHIDLRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKKLVCGDEGLGAMAEVGTIVDKVK 192
The following BLAST results are available for this feature:
BLAST of TCONS_00025970 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
COAC5.199e-5446.74Phosphopantothenoylcysteine decarboxylase OS=Homo ... [more]
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