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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026005 ID=TCONS_00026005|Name=TCONS_00026005|organism=Clytia hemisphaerica|type=transcript|length=144bp
GTTGAAGATTATTTATCCAAATATTGAGTTCGATTTTGaGGATGCAAACT
TGTGTGGGAGTTGTAGCTCAACTGCGAAGTACAAAAATCCAACGTTGTGC
AAAAATTGTCAATATGGAAAAGGAGTAAGAGCGCTTTGTGTTAG Run BLAST on NCBI transcript from alignment at sc0000559:203132..204344- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026005 ID=TCONS_00026005|Name=TCONS_00026005|organism=Clytia hemisphaerica|type=transcript|length=1213bp|location=Sequence derived from alignment at sc0000559:203132..204344- (Clytia hemisphaerica)
GTTGAAGATTATTTATCCAAATATTGAGTTCGATTTTGGTGAGTAAAGTA
CTCTTAGGTTTCAAATAAACGGGCCCCCATTGCTTGTTAATTTTTTAAAA
TTTTCCAACGCCCTCGGACCTTATTAGGACCCCCCCGTTTATTAATTTTT
AAGAATATTTTCAGCTGTCAAAGAGAAGGCCCCTTATTTTGATCTAAACA
GCCCACTCTAAATATGATTTTTGCCTATATTTACCTTATTTTTGGGTTTT
CAGAAGTACAATTTCCAACCCCGGCAATTAGGTCCCCCCCCCCGTTTATT
AATTTTTAAGAATTTTTTCAGCTGTCAAAGAGAAGGCCCCTTATTTTGAT
CTAAACAGCCCACTCTAAATATGATTTTTGCCTATATTTACCTTATTTTT
GGGTTTTTAGAAGTACAATTTCCACCCCCGGCAATTAGGTCCCCCCCCCC
GTTTATTAATTTTTAAGAATTTTTTCAGCTGTCAAAGAGAAGGCCCCTTA
TTTTGATCTAAACAGCCCACTCTAAATATGATTTTTGCCTATATTTACCT
TATTTTTGGGTTTTCAGAAGTACCATTTCCAACCCCGGCAATTTGGGCCC
CCCCCCCCCGTTTATCAAAATCTCGAAAATTTTTCACACTTAAATTTTAC
AACTTTAGAGGATGCAAACTTGTGTGGGAGTTGTAGCTCAACTGCGAAGT
ACAAAAATCCAACGTTGTGCAAAAATTGTCAATATGGAAAAGGTGAAAAA
TATTCGACTTAAATTTTCGAGATTTTTTTAACCAAAAAACAATGAGACTG
ATGAGGCTGTCGAGACTCGGCTTTTCTTATTATTTTTTTTCAACCCTTTT
TACTGCTTCGACAAATCGTTATTTAAAATGTTAGCCATTTTGAGGCTCAA
GTTTGTTCTTAAAATTGTTGTTATTTTTTGGCATCTTTGAGCGTTCTTTG
AGAGTTCTTAAAAAATTTCAGTGACGAGTTTTATATTCTTGATATGCGTA
AGTCATTTTTCTAGCGAAAACACCCTAAAAAAGCCGGGATTTGACCCCTC
TCTGTTACTTAAAATAGCTTTTTTGGGTGCTCCCGTTAAAAAATATGACG
TCATCTTGACTTACGCATATCAAGAATTCAACATTTTTCTAGAAAAGACG
GTAAATGATGGATTTTCTGAATTACTTTCTGTTTCTTTCAGGAGTAAGAG
CGCTTTGTGTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026005-exon-sc0000559-1575043694:204307..204344 | TCONS_00026005-exon-sc0000559-1575043694:204307..204344 | Clytia hemisphaerica | exon |
| TCONS_00026005-exon-sc0000559-1575043694:203603..203686 | TCONS_00026005-exon-sc0000559-1575043694:203603..203686 | Clytia hemisphaerica | exon |
| TCONS_00026005-exon-sc0000559-1575043694:203132..203153 | TCONS_00026005-exon-sc0000559-1575043694:203132..203153 | Clytia hemisphaerica | exon |
| TCONS_00026005-exon-sc0000559-1510915933:204307..204344 | TCONS_00026005-exon-sc0000559-1510915933:204307..204344 | Clytia hemisphaerica | exon |
| TCONS_00026005-exon-sc0000559-1510915933:203603..203686 | TCONS_00026005-exon-sc0000559-1510915933:203603..203686 | Clytia hemisphaerica | exon |
| TCONS_00026005-exon-sc0000559-1510915933:203132..203153 | TCONS_00026005-exon-sc0000559-1510915933:203132..203153 | Clytia hemisphaerica | exon |
| TCONS_00026005-exon-sc0000559-1491911889:204307..204344 | TCONS_00026005-exon-sc0000559-1491911889:204307..204344 | Clytia hemisphaerica | exon |
| TCONS_00026005-exon-sc0000559-1491911889:203603..203686 | TCONS_00026005-exon-sc0000559-1491911889:203603..203686 | Clytia hemisphaerica | exon |
| TCONS_00026005-exon-sc0000559-1491911889:203132..203153 | TCONS_00026005-exon-sc0000559-1491911889:203132..203153 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000559 | supercontig | sc0000559:203132..204344 - |
Blast
The following BLAST results are available for this feature:
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