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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026199 ID=TCONS_00026199|Name=TCONS_00026199|organism=Clytia hemisphaerica|type=transcript|length=351bp
AAAGTTCTTGAAGAAATTGATGGCACGCGAAAAAAGtaTTCACCGACATC
AATAATCATTTATTTGCATCAAGGCATCGAATATCGGATTCTTTCGGGAA
TGCAAAAGCAACAAAAAGAACTATTCGATAAGCTTGCAGGTCACGTGGAC
GTCGTGGTCGAATCACACACCCATGTAACCAGTGGACACTTTTACCATAA
TAAAACACTGTTCACTGGCCAGTTAGGAAATTTGTTATTCCCGTTGCATA
GTCCAGTTGTTCTCGACTGTAAGTATAGCACTGTGTATAACTAAAACAAA
CAACCTTACCAAAGGCTTTGGCAATATTTTCTAAGCTGGATAtcatcccc
g Run BLAST on NCBI transcript from alignment at sc0000564:222884..224085+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026199 ID=TCONS_00026199|Name=TCONS_00026199|organism=Clytia hemisphaerica|type=transcript|length=1202bp|location=Sequence derived from alignment at sc0000564:222884..224085+ (Clytia hemisphaerica)
AAAGTTCTTGAAGAAATTGATGGCACGCGAAAAAAGGTATAACAAAATGC
TTAACATAACCCAGTTTACAACAATTCTTTGATGTTAGTATAAGGGATAA
TAAAAGACCTGATTAGTGCTGAGATTCAATCCGTTTTCCTAGGATTGAAT
TCAGGTAGGTTTCTAAGGGTAGGAAGAATGACTAACGTAAGCGTGTATTT
GCATATACGTACAAGTACGTACTAGAAATTGTAGAGATTTTATgtctcag
gcaaattaaggcctgtccagatttttcaaattagcttaattttttatcac
cgtttccacttgtcatatcatatcacttcatacatcgaaagaagcgtatt
agagtgtagatcactggaatgGCTGTGCCATGNtatcacttcatacatcg
aaagaagcgtattggagtgtagatcactggaatgGCTGTGCCatgattaa
ttttttcacccaaaaaaagatattaggcaaaaaccaaaaaatgctgacat
cagcaaaacttgtttttagaataactccagtttggcttatggtaaaaaca
tgaaattaattatggcacagctattccagtgatctacactcaaatacgct
tctttcgatgtatgaagtgatatgctatgacaagtggaaacggtgataaa
aaaataaggtaaatttggacatgccttaatTTGCCCGAGGTCGCGTTACC
ATAAAAAAACTTGAATCCAATGCCTTTTCATAGTGATAGATTCCTAAATT
TGTATTTGAAAATGTcttataaaatctaaaaaatgatatttaacGTGAAA
GGGGAAACCCAAATCGGGCCTACCCTCACTTAGACCGTAATCGACTAAGT
ATTTATAAGCTTACCCATTGatggttttcttttttagtaTTCACCGACAT
CAATAATCATTTATTTGCATCAAGGCATCGAATATCGGATTCTTTCGGGA
ATGCAAAAGCAACAAAAAGAACTATTCGATAAGCTTGCAGGTCACGTGGA
CGTCGTGGTCGAATCACACACCCATGTAACCAGTGGACACTTTTACCATA
ATAAAACACTGTTCACTGGCCAGTTAGGAAATTTGTTATTCCCGTTGCAT
AGTCCAGTTGTTCTCGACTGTAAGTATAGCACTGTGTATAACTAAAACAA
ACAACCTTACCAAAGGCTTTGGCAATATTTTCTAAGCTGGATAtcatccc
cg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026199-exon-sc0000564-1491911889:222884..222919 | TCONS_00026199-exon-sc0000564-1491911889:222884..222919 | Clytia hemisphaerica | exon |
| TCONS_00026199-exon-sc0000564-1510915933:222884..222919 | TCONS_00026199-exon-sc0000564-1510915933:222884..222919 | Clytia hemisphaerica | exon |
| TCONS_00026199-exon-sc0000564-1575043694:222884..222919 | TCONS_00026199-exon-sc0000564-1575043694:222884..222919 | Clytia hemisphaerica | exon |
| TCONS_00026199-exon-sc0000564-1491911889:223771..224085 | TCONS_00026199-exon-sc0000564-1491911889:223771..224085 | Clytia hemisphaerica | exon |
| TCONS_00026199-exon-sc0000564-1510915933:223771..224085 | TCONS_00026199-exon-sc0000564-1510915933:223771..224085 | Clytia hemisphaerica | exon |
| TCONS_00026199-exon-sc0000564-1575043694:223771..224085 | TCONS_00026199-exon-sc0000564-1575043694:223771..224085 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000564 | supercontig | sc0000564:222884..224085 + |
Blast
The following BLAST results are available for this feature:
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