TCONS_00026260 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026260
Unique NameTCONS_00026260
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1875

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026260 ID=TCONS_00026260|Name=TCONS_00026260|organism=Clytia hemisphaerica|type=transcript|length=1875bp
ttattattgttgttgtttttgtacaTGTTGTATGGAATTATTTGGTTTAG
TATGTTTGGTAGAGTATAGTTCTAAGAGAAtactgttttattttgtttaa
aggTGCTGGTGAAAGTGGTAAAAGTACGATTGTAAAGCAGATGAGAATTC
TTCATGTGGACGGATTCAATGAACAggagaaaaaagaaaaaatagagGAT
ATAAAACGAAATATAAAAGAAGGAATACTCACTGTAACAGGTGCAATGAA
AACTATATTACCGCCAGCTACACTGGAACATCCAGAAGAACAATGGAGGA
TAGATTGGCTACATGAAAATGCAGCCCCCGATGAAGAATTTGAATATCCT
CaagacttTTATGATCATGTtgaaatcctatggaaagacaAAGGTGTCCA
AGGATGTTTTGAAAGATCAAATGAATATCAATTAATAGACTGTGCACAAT
ATTTTCTCGATAGGACTTCTGAAGTTCGGAAAAAAGACTACAGTCCCAGT
AATCAAGACTTATTACGCTGTCGTGTTTTGACGCGTGGAATTATTGAAAC
AAGATTTCAAGTGGATAGAGTAAATTTTCATATGTTTGACGTTGGTGGAC
AAAGAGATGAACGTCGAAAATGGATCCAATGTTTCAATGaTGTAACAGCT
ATTATATTTGTTGTTGCGTGTAGTAGTTATAATCTTGTATTACGAGAGGA
TCAAACACAAAACAGATTACGTGAAAGCTTAGAATTATTTACTGGTATAT
GGAATAATAGgtttCTAAAAACTATATCCGTGATTCTATTTCTAAATAAA
CAAGATTTACTTCGTGACAAAGTGCTGGCACAAAAGTCAAAATTAGAAGA
TTACTTTGCAGATTTTGCAAGATATAGGACACCTGAAGACGCCATAAAAG
AAGCTGGCGAGGAAGATGAGGTGACCAGGGCAAAATATTTCATTAGGGAC
GAATTTTTAAGGATAAGCACGGCAACCGGTGAAGGGAAGCATTACTGTTA
TCCGCACTTTACATGTGCAGTGGACACTGAAAATATTAGGCGTGTATTTA
ATGACTGTCGAGATATTATACAACGTATGCATTTGAGGCAGTATGAACTG
CTCTAGCATGGTCGATATGTCTACCCTTTATCATCATGGTTGTTTTGGTT
AGAAACAAACGAAAACGTCAAAAATGTTAAAGGTTAAAATAAATATCACG
ATGGTCTCAGGGTTGTATCAAGTACGGTCTAGTACACTGTTCACCAACCA
AAAGACATGTCACTCAAGGAGGGGAGATTTTTACACCAATGAAATACGAT
GGTCGTGTTTCAGCCAGTCAGATTATTCGCGGGGCGATGAAAATCTGATA
GATTTTGCATGTTTTGAGGAAAACGAGTGCTTTAACTAAAGGGAAGCCAG
GATCCTTAACTCCAGAGTTCCCGATCGATATAAAAGATCTGAAACGTTTG
ACGTTAGCACGTTTTTTACACGATCCAATTACAGCTTTTATTTGGTATTG
AACATTCAACGAGAGAATTGCTTTCAAGAGCCTTTTACAATGCTGCTATG
TGTTTTTTGCAACAACATACCAGGAAAAATGTTATTTATAATGATAATTG
ACAAAAAAGAAGATAcaatatttggaaaaattatgaGTTATAAAAGAAAA
GGAAACTGTTAATAAGAGATAATCAAACGCATTGAATCGCTGAAAATTAT
TACACCCATGCTGCTATACCATGTTGTCATAAGAATTCGTTTTCAATACG
ATTTTTAAAGTGATAATGTTGTTTTGACCTTTCCAACGAGTAAGAATTGG
TTTTTGGTCAATGTTTCGCTGCAATTCAACCACAGGGTGTTTATCGAATG
AAAAGTGAATATTCTTATTTTGCTG
Run BLAST on NCBI

transcript from alignment at sc0000566:19..16425+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026260 ID=TCONS_00026260|Name=TCONS_00026260|organism=Clytia hemisphaerica|type=transcript|length=16407bp|location=Sequence derived from alignment at sc0000566:19..16425+ (Clytia hemisphaerica)
ttattattgttgttgtttttgtacaTGTTGTATGGAATTATTTGGTTTAG
TATGTTTGGTAGAGTATAGTTCTAAGAGAAtactgttttattttgtttaa
aggTGCTGGTGAAAGTGGTAAAAGTACGATTGTAAAGCAGATGAGAATTC
TTCATGTGGACGGATTCAATGAACAGTAAGTTGCCATGTTTTTCACAGAT
AAGGGGCTCCTCCTTAAATTATAATTGTCCTAGATTCATGTTAGATGGAA
GCtaaattctaaaatttctaaCTCTGATTTGAAAAACATTCTATCTTCGT
TTCTagggagaaaaaagaaaaaatagagGATATAAAACGAAATATAAAAG
AAGGAATACTCGTAAGTTTATTTTATTGATCGTTTAGCTGTTTTCATAAC
ACTGCCGTTCTCGGTCCTTTTCGTCGAAAATAATATCACGTGATAATTAT
CCGCGCACAGATTTTCGCAGTACAAAACCTTATTCGAAGCAGTCACATGA
CTAAAATATCACGTGCTCATTTCgttcaaaacaacattttccgTCTCTAT
GTGGCTGAAAAGTTGCGTAGCTGCAAAATATACAAGGCTCGGTTAAAAGG
TCATATTATCCCAAACATACAAACTTTGTATAATAAGTTTCCTCCCttct
aaattttgacaaaataacaGCTCGATAAAAACTTAGGTCATCCTTGGCAT
TTTTTTAGATCCAAATTATGGCCTATGAACTCTTTTTACACTCAAAAATG
AAGACTGTTGTTTGCTTGAAATGTAATATTTTGGTTTAAGTCAAAGTTTC
TTTaccatttcaatgttttttatatttattttctatGACTACATTCAAAC
TAAAAACACCTTAGTTCCACTGCTCATAAGGCAATCTTGAGGTTATTTTG
TTTGAGTCTAGTATGACAAGTTTTCGTTGATAGAAATAAGACATCAACAC
ATTACAGTATCAGCCAGTTTCGCCTCTTTTGCCAAAGACACTCCTAGATA
ATCTAGAGTTTTTTATTGATCTTGATTTGTCTCCCTGTAACCTGAGATcc
gattgtggttgttttctgcccaccacgctgaagctctaaagggatgggtg
aaaacatacaatctgacgaatatgctatctcaaaatcgtaaggaccggtt
tgtctaaaaggactggggatgacaacaaagttgcgtgattgtgtttacaA
ATAGGgagccgtatcagtttttgactttctggcgcacaacaagattcttg
ttgtaaaatttcccgcgggaggactattttcctcagatgtacaattttca
agtgccttcagaggtttaccgtgcatgtaagaaaattatgaacagctgtt
atcaggttatctCCCTGTTGCTTGCAAACCAACacccttcaaaaaagcag
tgGCTAGCTCAATGATTTCTTTTGGTTAACAACACAAACTGGCTTGCATG
ATCATTTACAGAACAAGATTATGTTGGttattttttcctcattttttttg
taatcacAGTAgttagagtctctttaactcaaacTTCTATAACTGGAACA
AGTTTCGTTCCGTTTTTGCGTGGTCTTCTCATACTGCAAAGGAGAAATTC
CCTGGATCGTTTTTAGACTGTTGTAATTACATTTTTGAGCTTAAATCAAA
CTAGCCTGGAAATCCAAGCGTTACACTTTTtccacagtctagtttatgat
atgtttgctgcttgtttaacgcttggcgcaggtaactcgcctgcaaaatc
aaaacaaaatggtacagtagagctgtgagcggagctgcgtagtttatttg
ttttggaattttgctgctttgagtggtcagtcatttgatggctatgcaag
ttagcctccactgatgcaatcCGACTTCACAGTATAAATTTAACTTCTAC
TATTCCTATGATGTTTTGTATGTATTTGTAAATGCATGGCCCGAATATGA
ACCGAACAAAATGTTCAGGCTGATTCAGCCATACTTTTTTGTGACCTGAG
CATGGTGCCATATGGAAATTGCCTTTTCGTTGTGATTGGCTATTTCAGTG
AATTGCTTGTGTTTAGTGTCACCCAGGCTGAGGGgcagaacattttgaaa
atttgcctCTCATTATTGGCTTAAAACTCATTCATTTTAATGGCATTAAT
TATTTCTAATAATGAATCTTGAAAGAAGGAAAGATAAGCTAGATCATTGC
ATAGAAAATGACTCTTTCTTtaagatgttttgaaaaaggtaCGAATCTAA
CATTCTTTCTACTGCCTCAAAAATGTTTGAATTGGTTTATTACAAAAACA
AGCTAAATGAAAATAATCGGCAGAAAATGATTATTCCAAAAGATTGGACC
AACATTAACCAAACAGTATAGGATTAATATAGATCACTCAagcagttagt
ggaagtacatCGATTTGTGAAGCGTCTTTATGTaacatagaacaaaagaa
aaaagcaaaagaacaaaggaattacccatagtCACCATTTCGCAACCATG
GGGAAGTTTCATTCTTTCCCATaaatgtgaaaatgaaaaacaaagaagct
tttttcgttttctgatagtctttttaatctgccataaAGTGTTGTAGAAA
CAGGAGTTTTATGGTAACCTTGGCGCATCCTAGCGACGTCATtaattttt
atttagttttcaaattttacaattgTGTTTTAATAATATATATAAAGAAG
TCCTGAAACTGGTAGAAAGACACATTCTCCTACAAAGAGGCTTCAAAACA
ATGACGTAGAAAAAGGTTGTTATAAAGTGTGcctttttatcttaaacaat
tTCGTAAACTATGTCACAACCACGgagcgctgacttttagttttatgact
tgttctcactcgtttggtttcagtaataaaaagaaagtcgttattgtaaa
ctttgaacatgcttaaaatcgaggtacttccactaactgtcaAGTATTGG
TTGTTTATTTCTTTacatctgaaaatttttttgggttggtcatttttttt
tctggtgGATTTTAACTAAACCGACCGCTATCTCGATTACTGACTGAATG
GTACTATTTAGTAAAGCTACCAGATCAGAATTTGCAGCACAGAAATAGAA
TTAATGAAGTCTTTTAAATTTCCtacaattttagattttatgtttttata
atgGAGCATCCTGGCTTAAATCTATTTCTTTGAtaatcaattttattgtt
tgGTAAAAGAAAAGGACCGAGACAAAGTGTTAATATTGTGTGTATCATTG
TTATATTCATAGTTCGGACCCCCCGTTTCTTAagggggggatgacacctt
ccaaaaaagtgaagaagggtgggggatcagaaattttcattaaaaagggg
ggggggatagcaagaaggggggggcttacatatattgtagatgtttttcc
agcactgttatgaaatttggtctgcatgaaaggaagttctttattttcac
taaaaagtggtattatatttgccagacttaatttttctttactgtttccc
ttccctttttaccatgaaaattttagcccaaaacccttgggggataggca
tttttaaaggttggggggataccaagatcagacccctttccgcactatga
taTTATAATTCTTTACCTTAATGCCCTTAATTTTCGCGCGCCTTTTATTT
TCGAGCCCTATAATTTTTGCGCCTTTAATTTTTGCGCACCCCTTAAAAAC
GACCTTTCGTGCatcctttaattttcgcgcacccATATTATCATCAATTT
TCGCGCATCCTAAAATTTGTTTCTCTTTacatattttacatatttttttc
tggctgttttctagtcaaatcctcataaaaaagtctccaaaaggcggaca
ctctaattagcggacactaataTGTTTCACCAATGGTGTCTGCTACTTAA
AGGCTCCACTGTACTATGAAtaacatatttttatcaaaaatccttAGAAA
AGCCATAAGTGACTAAAAATGCCTTATTTGCTAATCCGCCCACCTTTTGC
AACCTTATCCGACCTAGTGCGCAAAAATAGGTCTTTTTCGCGTATCCTTT
AATTTCTGTGCAGTGGTAGTGCGCAAAAATTAAGGGCGCGCGAAAATTAC
GGGCATTAAGGTATATAGTTTTTACACAAAGTTTGCAGTTGTCTGATGCA
TATCTTAAATTCTGTCTTTTTTCTTCAATGGCCTTATGTTTACTTCATGC
AATTCAAATGAGACTagattcaaaaaaatgtttgtttgctgTCATCCAGG
CTGCATCATTTAAGGCGTGTGATAGCACGCACATgcctccacacacacct
aaaatctCTGAGGGGTGTGATCAATCACACGCCATAAATCCAAATTTCAC
TACAcagcactccttatcacacgcctaaattccaaaaaataaagtttgtg
GAGTGTGATTGACCATACGCCTGCATttttcaaatgacaaagccTGGTCA
CCTGACCAACTCTAACTTGAAACTTGTCAACCCCTAAAAAGTTATTGCCA
TTATTATACCAAAAGGTATAATAAACACGCGGTACTAGTTACCACTTTTT
CCCGTTTATCAAAGTTCAGTACACAATTGAGAATAAACGGTAATATAGTG
TGCAGAGAGGTCtggcccccccccccatttataTTTCATCCCCCTGTATT
ATGCATCCCcctattttaaaaaatttttgaactCGCACTAACTACAGTGG
TGGTTCACAAACCATTTAAtaccaaaaaattcaaatttatatgGTAAGAA
AGGGTATAAAATGATGCCGCGGGtgaaaaatttgccatttaCATTGCCAT
TTTGTTGGACCTATACCCAATTCTTTGACCAATTTAAGATATAATAcata
tttttaccaaaaagttGTCATCCCcctatttttatttaatacCCCACTAA
AAACTCAAACCTCCCCATTTTACTCGGTAAATCTCTCATCCCCCCTATAC
AGCCTTTCTTGAAAAGCTGGATCCCCCTTAAAGAAGAGNGACCTTATCCG
ACCTAGTGCGCAAAAATAGGTCTTTTTCGCGTATCCTTTAATTTCTGTGC
AGTGGTAGTGCGCAAAAATTAAGGGCGCGCGAAAATTAAGGGCATTAAGG
TATATAGTTTTTACACAAAGTTTGCAGTTGTCTGATGCATATCTTAAATT
CTGTCTTTTTTCTTCAATGGCCTTATGTTTACTTCATGCAATTCAAATGA
GACTagattcaaaaaaatgtttgtttgctgTCATCCAGGCTGCATCATTT
AAGGCGTGTGATAGCACGCACATgcctccacacacacctaaaatctCTGA
GGGGTGTGATCAATCACACGCCATAAATCCAAATTTCACTACAcagcact
ccttatcacacgcctaaattccaaaaaataaagtttgtgGAGTGTGATTG
ACCATACGCCTGCATttttcaaatgacaaagccTGGTCACCTGACCAACT
CTAACTTGAAACTTGTCAACCCCTAAAAAGTTATTGCCATTATTATACCA
AAAGGTATAATAAACACGCGGTACTAGTTACCACTTTTTCCCGTTTATCA
AAGTTCAGTACACAATTGAGAATAAACGGTAATATAGTGTGCAGAGAGGT
CtggcccccccccccatttataTTTCATCCCCCTGTATTATGCATCCCcc
tattttaaaaaatttttgaactCGCACTAACTACAGTGGTGGTTCACAAA
CCATTTAAtaccaaaaaattcaaatttatatgGTAAGAAAGGGTATAAAA
TGATGCCGCGGGtgaaaaatttgccatttaCATTGCCATTTTGTTGGACC
TATACCCAATTCTTTGACCAATTTAAGATATTATAcatatttttaccaaa
aagttGTCATCCCcctatttttatttaatacCCCCCTAAAAACTCAAACC
TCCCCATTTTACTCGGTAAATCTCTCATCCCCCCTATACAGCCTTTCTTG
AAAAGCTGGATCCCCCTTAAAGAAGAGGGGTTCACACTATGACACTTCTA
ACTGTTTTTCTGACAAtttgttttagagaattaaaattcttttcttctaa
aagttaaaactttctactttaagggaacttatcttgacgagaactaattt
tggcaaaattggcGAGCAAactcaaaatttgccaaatctagttcccacca
aaattaattttttaggtcatttgccaaattaagttctcgccaaaattaaa
aaaatcattgattcaccaaaataagttcttgccaaaattaaaaattttgt
tttttgcctaaataacttCCTGAGTTCgtaaaaaaagcttcaaataaggc
aaaatagaacagatttacgctgtcatttgCCAAGATAAGTTCCTCGCCAA
AACTAAAAAATCAttgattcgccaaaattagttttcaccaaaattaaaaa
actattttgaaTCGACCATTCGTCAAAAATTAGTTCTCACCAAAAAAGTT
CCCTGAACGTATTCCGTTCAATTTTAAGCTTAAATACAGTTGGAAATTCC
CTTCTAGCTTGTCTGCTTTTCTTCAAAACTATTTGAATGTAGACCCAACT
TTCAAAATCTAGGGTTGGGTAACAACAAACTACCATTTTTTAAAGTGCAG
CCTGACTTCATTGTTTACATCAGGATGATTTTCTTAATGGTAACAACACT
TAAAAATCTTATTATTATGAATTAATTCTAGACTGTAACAGGTGCAATGA
AAACTATATTACCGCCAGCTACACTGGAACATCCAGAAGAACAATGGAGG
ATAGATTGGCTACATGAAAATGCAGCCCCCGATGAAGAATTTGAATATCC
TCaagtaaatttttctttattcctAGTAGGGTGTAAACTGGAaccatgaa
aaaatactttttttggattttcaaaattgtcacaattttttatcaaaatt
tatcatattgtaagactttttgcgcaattttgAGGTCCATAAGTCAAAAA
TCCACTGTTTGCCCCAGGGGTATCTGATTCGCGGTAGTagcaaaaaacgg
caaaaatggcANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGActataaaaggccaggaa
atggtcaaaatggtttctaaatggtgtcttgtactaatattcaacacaaa
aagacaaaataaccccagcgagatcgctcaatatttcaatttcaggctaa
aaaggccgATTTTCTCAGATTCTGGGttgcaaaatgcatgaaagcagcat
ttttgaggacccacaacttttaaactttttaaggtacacacttgaaattt
tcagcaatgaaacacttcagagaaagctccaNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNctccaggaaaaatcaaacttgagttttcaaatatttcctataaa
tccataatggcgccctagaaattgagttttcatgctaaatgccaatattt
caagctaaaactcagttttcttgggctaaaatctaaaaaatgatttcaaa
tggtgttctgaaatctttgaatcttggaagtattctgaaaatactctggg
agaatcaaaatggtttgggtcNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Natggtttgggtcagaaatttgcccaagtctgccattatggtattgcatt
tcccactaaaacgcaatatttagagttaaagtctgattttctcaggctaa
aatcgcaaaaatgctttcaaatagggtcctgaaatttttggtgttgaaag
tattctggatctactctgggagaaccaaaatggtttgggtttgaaatttg
cctaagtctgccaatatggtattgcatttcctactaaaacgtgatattta
agagttaaagtctaattttctcaggctaaaatctcaaaaatggtttcaaa
tagggtctgaaatttttggtgttgaaagtattctggatctactctgggag
aaccaaaatggtttgggtttgaaatttgcctaagtctgccaatatggtat
tgcatttcctactaaaacgtgatatttaagagttaaagtctaattttctc
aggctaaaatctcaaaaatggtttcaaatagggtcctgaaatcttttggt
gttgaaagtattctgggaaCACTCAAGGAAAATCATAGTGGTTTACAATG
GTCATATatatgccaaagtctgccattatgaatttcatttctttaggaag
aacacttaagcttactcaaaacattgtgttttagaatgagatacaattcc
ataatggcagactttggcaaatttctgacgAAAACCATCTTGGTTTTCCc
atagtatttccagaatactttcaacaccaaaagatttcaggaccctattt
gaaatcacttttgagattttagtctgagaaaatcagactttaactctaaa
tattgcgttttagtggaAATGCAATTCCACATTgcggactttggcaaatt
tctaacccaaaccattttgattctcccagagttttcctgaatactttcaa
cacccaaagatttcaggacaccatttgaaaccatttttgagattttagcc
agagaaaaccaagttttagcttgaaatattggNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNATGGACCTcaaaattgcgcaaaaagtcttacaat
ataataaattttgataaaaaattgtgacaattttgaaactctaaaattca
aaatccagTTTACACCCTATTCCTAGGCTTCAAGTTACCCTAACTTCACT
AAGCCTATTAATTTTAGAAATTATTGGTCAACAATGAAGAATTTGAAACA
ACTTGTCATTTTTAAAGTGCTCGATACAAACAAAGTAAATTTAACATTAA
GATACAATTTTGACATAATAATGTGATATTTTTCAGTTAAGCATAAGCCA
TAAGTCAAATTTCTttatacaaaaaagaaagtatctcaaaaaaatcaaat
ttcgtaaAAACCTATTTTGTAACTTACATACACATACCTTAGGttgataa
aaattcttattattttttttaggacttTTATGATCATGTtgaaatcctat
ggaaagacaAAGGTGTCCAAGGATGTTTTGAAAGATCAAATGAATATCAA
TTAATAGACTGTGCACAATAGTATGgttatgtttttgcttttgtttttgt
tgaagaacaaaatttctaatttaaattttaatgTTAAGGATGAATGTATG
GTAGGAATTGGTTACAGGATAAAATGGAAAGGAATATGAcattattttct
cattttttgaagTTGGTTGACTTGTTCACCCAGATAGTGGCATGGAaaca
agaattaaaaaaaatgttttacttctgcatttctgtaaaagaattgaaaa
aaaattgtttttgaaaaatctttaacttaaaagtttagaattgaaatgat
tttttgtcTCACACAAAATTTCCAGTCAAGGCAAGTTCCTCTTCAATCTG
TTTCAATTATAATATTAATTTCAACTACTTTATATTAACCCTGTGATTTT
ATCTTTCATTCCAGTTTTCTCGATAGGACTTCTGAAGTTCGGAAAAAAGA
CTACAGTCCCAGTAATCAAGTAAGTGTAATCTGACTTCTTTTGTAACTTC
AACTGACAATTGTTGATGCTGATTGTTggtcagaaaaatttattttgaca
aatttgtTCAACATAATCAGCAATCTATTAACATAAAGGTAATCTTGAAA
GGGAAACAGAAGAGCCAGGCTATACTACtggctttcaaaaaaaacatacc
aaagatgaataaaactgtatatttcaagaatttttgataatttagaagca
caaaaattgagttttaaaGAGACTGTTTTTCGTTTGGTGAAAAAGGTATC
TTTCTTTCcctaaaattcaattttttaaacaacCTAAAGTTGCAGCAAAG
CCTTTTTTGGAATTCAACTAAACTGCATGAACTGTTTCTCTTTACCATTA
TGTGAGCATGTTTCCAAATTAATTCTAAATTCTCTTTCAGGACTTATTAC
GCTGTCGTGTTTTGACGCGTGGAATTATTGAAACAAGATTTCAAGTGGAT
AGAGTAAATTTTCAGTAAGTTCATGATAAGACTGAAACacttgattcttt
ttttttcatttctatttATTGGTTATAAATCAATCTTGTTAACAGTTTGA
GATGTTACTGAAACTacaacaaaattttgattttggcataGATTTTTAAT
TATCTTTGGAAATCTGGAATCTAGAACCTTGTATTCTATGCAATTTTGTA
TGTTTCTGAGGTCTGAATTCAAACTCTGTCATTTTCAGCCACATTGTTTC
ACGccacattttttaaatatctggttTGATACCAAAGCAGATTTCAGTAA
CATACTTAAGGAATGATTGGCTCCGTTGAAAACACATTTCTCATGCCATA
CTCAGACCAAAGTACAaatgttttcttaaaaagtaaaatattgtATCTGT
ATAATACATCTTAAATGTTGTTTTCCTTGTGTTGACAGTGCCAGGTTTTT
GTAATCTCATTAACTAACAAGCCCTGTCTTTTCCAATTCATTTTTTTAGT
ATGTTTGACGTTGGTGGACAAAGAGATGAACGTCGAAAATGGATCCAATG
TTTCAATGGTACAATTTTAGTACTTTGATCAATTCTAATTCTTCTTAATT
ATAAGATGCTAGTGTAGTGAACTCCTCTCAaggtgaaattgaaaaaaatg
taccTTGAGTGTTTTCCACTTCTTCAATTAGATTAATTTTGCaagccaaa
aataattttcttgtttttttttgtaaatcaaTGTTTTCAAATACATTATG
TCGATTTAATTTGTTGAATCAGCCAAAAATCAGTTGGAGAATGGtccttt
aaatttttctttgtaaaaattgtaaattaacAGGGTATTTAAAgctaaaa
atgtaattttaaaaagtttgcaTTGATCTCATTTTGTGTGTTACAATCTC
ACacaatttcgtgagtttttgtaaaaaaggcaacaatttgcaaaaaaaat
taaattaatctCATTGAAACATATTTTATTGTGAACTAAACCAGACAATT
TTATTCAATACAGATAATTGTCCTTGAATTAATAAAATACACTTTTAAAG
TGTtacaaattttaataaatttttaaaatcatgcTCAGTTGCATTATCTT
GAAAGGATGTACTATTATTTAGGCTACAAGCTTCGCCATTTAGATTTGAC
ATTCTTTGTGTTATCAATGTCTAATGTgatcattatttttctatttcaga
TGTAACAGCTATTATATTTGTTGTTGCGTGTAGTAGTTATAATCTTGTAT
TACGAGAGGATCAAACACAAAACAGATTACGTGAAAGCTTAGAATTATTT
ACTGGTATATGGAATAATAGGTATAACATTTCAAAATCTTATTCCCTTTC
TTCATTTTACCTTTAAAGAATATTTGACAAGTCTATTAAAATTTGCTTTA
AAACAGcacttttgaaacaaaaaaaatttctcccttCTCCGTGCTGTACA
AGCACAAAATCTGAGAAATTTAATTGCCCTGTGCAAGCACagaatttgaa
aagtttcatTGTTTTGTTAACATGATAGGTGTACCTGTTTTGTATATCTT
AAAACAATATCTAATATGGTAAATctataaaatcgaaaaaactattattt
cattgtttttggaTAAATGAATGTGTTGTTTATTTCccttccttttcttt
tttcaggtttCTAAAAACTATATCCGTGATTCTATTTCTAAATAAACAAG
ATTTACTTCGTGACAAAGTGCTGGCACAAAAGTCAAAATTAGAAGATTAC
TTTGCAGATTTTGCAAGATATAGGACACCTGAAGACGGTATGTATCACAC
CCATGAGCATATTGCAGACTAATCCTAGCACATAGATTTTATAATCAATC
AGTTAATTTTTCTGACCATTAAATTTAGAGTATTTTCTGGCTGCTGCATC
ATGAACAGTAGTTTCtggtttattaatttttgattgttttTGTTTTTGTT
TTTGTTTTTAGCCATAAAAGAAGCTGGCGAGGAAGATGAGGTGACCAGGG
CAAAATATTTCATTAGGGACGAATTTTTAGTAAGTACAGTGTTATCTTTT
TTTATAGAGCTATGAGGAAAACTCACCTCTATTGTGTATGTAGTTTATTT
GGTTGCAGGATGCATTTTAGGCCACATTCTGTAACTATCTAGATTTTAAA
TGCTTTGATTGGATATCGAACAATTGACATGCACATATGTACCAAATTCG
ATCAATATCTTTTAAATCTGTTTAAATTTGTATGTAAACAGTTAAAAACA
GGTTATTAATTATTAGTTTTGAATAAATGTTTTTTTAAATCTTTTTTACA
GAGGATAAGCACGGCAACCGGTGAAGGGAAGCATTACTGTTATCCGCACT
TTACATGTGCAGTGGACACTGAAAATATTAGGCGTGTATTTAATGACTGT
CGAGATATTATACAACGTATGCATTTGAGGCAGTATGAACTGCTCTAGCA
TGGTCGATATGTCTACCCTTTATCATCATGGTTGTTTTGGTTAGAAACAA
ACGAAAACGTCAAAAATGTTAAAGGTTAAAATAAATATCACGATGGTCTC
AGGGTTGTATCAAGTACGGTCTAGTACACTGTTCACCAACCAAAAGACAT
GTCACTCAAGGAGGGGAGATTTTTACACCAATGAAATACGATGGTCGTGT
TTCAGCCAGTCAGATTATTCGCGGGGCGATGAAAATCTGATAGATTTTGC
ATGTTTTGAGGAAAACGAGTGCTTTAACTAAAGGGAAGCCAGGATCCTTA
ACGCCAGAGTTCCCGACCGATATAAAAGATCTGAAACGTTTGACGTTAGC
ACGTTTTTTACACGATCCAATTACAGCTTTTATTTGGTATTGAACATTCA
ACGAGAGAATTGCTTTCAAGAGCCTTTTACAATGCTGCTATGTGTTTTTT
GCAACAACATACCAGGAAAAATGTTATTTATAATGATAATTGNGTTTTTA
GCCATAAAAGAAGCTGGCGAGGAAGATGAGGTGACCAGGGCAAAATATTT
CATTAGGGACGAATTTTTAGTAAGTACAgtgttatctttttttatagAGC
TATGAGGAAAACTCACCTCTATTGTGTATGTAGTTTATTTGGTTGCAGGA
TGCATTTTAGGCCACATTCTGTAACTATCTAGATTTTAAATGCTTTGATT
GGATATCGAACAATTGACATGCACATATGTACCAAATTCGATCAATATCT
TTTAAATCTGTTTAAATTTGTATGTAAACAGTTAAAAACAGGTTATTAAT
TATTAGTTttgaataaatgtttttttaaatcttttttacagAGGATAAGC
ACGGCAACCGGTGAAGGGAAGCATTACTGTTATCCGCACTTTACATGTGC
AGTGGACACTGAAAATATTAGGCGTGTATTTAATGACTGTCGAGATATTA
TACAACGTATGCATTTGAGGCAGTATGAACTGCTCTAGCATGGTCGATAT
GTCTACCCTTTATCATCATGGTTGTTTTGGTTAGAAACAAACGAAAACGT
CAAAAATGTTAAAGGTTAAAATAAATATCACGATGGTCTCAGGGTTGTAT
CAAGTACGGTCTAGTACACTGTTCACCAACCAAAAGACATGTCACTCAAG
GAGGGGAGATTTTTACACCAATGAAATACGATGGTCGTGTTTCAGCCAGT
CAGATTATTCGCGGGGCGATGAAAATCTGATAGATTTTGCATGTTTTGAG
GAAAACGAGTGCTTTAACTAAAGGGAAGCCAGGATCCTTAACTCCAGAGT
TCCCGATCGATATAAAAGATCTGAAACGTTTGACGTTAGCACGTTTTTTA
CACGATCCAATTACAGCTTTTATTTGGTATTGAACATTCAACGAGAGAAT
TGCTTTCAAGAGCCTTTTACAATGCTGCTATGTGTTTTTTGCAACAACAT
ACCAGGAAAAATGTTATTTATAATGATAATTGACAAAAAAGAAGATAcaa
tatttggaaaaattatgaGTTATAAAAGAAAAGGAAACTGTTAATAAGAG
ATAATCAAACGCATTGAATCGCTGAAAATTATTACACCCATGCTGCTATA
CCATGTTGTCATAAGAATTCGTTTTCAATACGATTTTTAAAGTGATAATG
TTGTTTTGACCTTTCCAACGAGTAAGAATTGGTTTTTGGTCAATGTTTCG
CTGCAATTCAACCACAGGGTGTTTATCGAATGAAAAGTGAATATTCTTAT
TTTGCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014762XLOC_014762Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026260-exon-sc0000566-1491911889:19..193TCONS_00026260-exon-sc0000566-1491911889:19..193Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1510915933:19..193TCONS_00026260-exon-sc0000566-1510915933:19..193Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1575043694:19..193TCONS_00026260-exon-sc0000566-1575043694:19..193Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1491911889:325..379TCONS_00026260-exon-sc0000566-1491911889:325..379Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1510915933:325..379TCONS_00026260-exon-sc0000566-1510915933:325..379Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1575043694:325..379TCONS_00026260-exon-sc0000566-1575043694:325..379Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1491911889:6700..6822TCONS_00026260-exon-sc0000566-1491911889:6700..6822Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1510915933:6700..6822TCONS_00026260-exon-sc0000566-1510915933:6700..6822Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1575043694:6700..6822TCONS_00026260-exon-sc0000566-1575043694:6700..6822Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1491911889:11191..11288TCONS_00026260-exon-sc0000566-1491911889:11191..11288Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1510915933:11191..11288TCONS_00026260-exon-sc0000566-1510915933:11191..11288Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1575043694:11191..11288TCONS_00026260-exon-sc0000566-1575043694:11191..11288Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1491911889:11683..11737TCONS_00026260-exon-sc0000566-1491911889:11683..11737Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1510915933:11683..11737TCONS_00026260-exon-sc0000566-1510915933:11683..11737Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1575043694:11683..11737TCONS_00026260-exon-sc0000566-1575043694:11683..11737Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1491911889:12159..12232TCONS_00026260-exon-sc0000566-1491911889:12159..12232Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1510915933:12159..12232TCONS_00026260-exon-sc0000566-1510915933:12159..12232Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1575043694:12159..12232TCONS_00026260-exon-sc0000566-1575043694:12159..12232Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1491911889:12718..12776TCONS_00026260-exon-sc0000566-1491911889:12718..12776Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1510915933:12718..12776TCONS_00026260-exon-sc0000566-1510915933:12718..12776Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1575043694:12718..12776TCONS_00026260-exon-sc0000566-1575043694:12718..12776Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1491911889:13418..13538TCONS_00026260-exon-sc0000566-1491911889:13418..13538Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1510915933:13418..13538TCONS_00026260-exon-sc0000566-1510915933:13418..13538Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1575043694:13418..13538TCONS_00026260-exon-sc0000566-1575043694:13418..13538Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1491911889:13875..14005TCONS_00026260-exon-sc0000566-1491911889:13875..14005Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1510915933:13875..14005TCONS_00026260-exon-sc0000566-1510915933:13875..14005Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1575043694:13875..14005TCONS_00026260-exon-sc0000566-1575043694:13875..14005Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1491911889:14180..14247TCONS_00026260-exon-sc0000566-1491911889:14180..14247Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1510915933:14180..14247TCONS_00026260-exon-sc0000566-1510915933:14180..14247Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1575043694:14180..14247TCONS_00026260-exon-sc0000566-1575043694:14180..14247Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1491911889:15510..16425TCONS_00026260-exon-sc0000566-1491911889:15510..16425Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1510915933:15510..16425TCONS_00026260-exon-sc0000566-1510915933:15510..16425Clytia hemisphaericaexon
TCONS_00026260-exon-sc0000566-1575043694:15510..16425TCONS_00026260-exon-sc0000566-1575043694:15510..16425Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000566supercontigsc0000566:19..16425 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
25.2841	30.5099	6.57972	2.60678	4.48978e-05	1.37426e-08	2.99116e-05	0.000124739	34.5361	7.37387	17.869	10.3348	12.5615	24.0466	7.32673	16.2534	47.0168	35.5823	34.9591	22.8744	50.9294	59.5508	61.8897	41.6353	0	3.6192e-07	49.2694	60.9701	72.9574	76.7288
Blast
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BLAST of TCONS_00026260 vs. Swiss-Prot (Human)
Match: GNAL (Guanine nucleotide-binding protein G(olf) subunit alpha OS=Homo sapiens GN=GNAL PE=1 SV=1)

HSP 1 Score: 507.679 bits (1306), Expect = 2.050e-175
Identity = 247/338 (73.08%), Postives = 293/338 (86.69%), Query Frame = 3 
Query:   90 ILFKGAGESGKSTIVKQMRILHVDGFNXXXXXXXXXXXXXXXXXGILTVTGAMKTILPPATLEHPEEQWRIDWLHENAAPDEEFEYPQDFYDHVEILWKDKGVQGCFERSNEYQLIDCAQYFLDRTSEVRKKDYSPSNQDLLRCRVLTRGIIETRFQVDRVNFHMFDVGGQRDERRKWIQCFNDVTAIIFVVACSSYNLVLREDQTQNRLRESLELFTGIWNNRFLKTISVILFLNKQDLLRDKVLAQKSKLEDYFADFARYRTPEDAIKEAGEEDEVTRAKYFIRDEFLRISTATGEGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLRQYELL 1103
            +L  GAGESGKSTIVKQMRILHV+GFN +EKK+KI DI++N+K+ I+T+  AM TI+PP  L +PE Q+R D++ ++ AP  +FEY Q+F+DHV+ LW D+GV+ CFERSNEYQLIDCAQYFL+R   V   DY+P++QDLLRCRVLT GI ETRFQVD+VNFHMFDVGGQRDERRKWIQCFNDVTAII+V ACSSYN+V+RED   NRLRESL+LF  IWNNR+L+TIS+ILFLNKQD+L +KVLA KSK+EDYF ++A Y  PEDA  +AGE+ +VTRAK+FIRD FLRISTATG+GKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHL+QYELL
Sbjct:   45 LLLLGAGESGKSTIVKQMRILHVNGFNPEEKKQKILDIRKNVKDAIVTIVSAMSTIIPPVPLANPENQFRSDYI-KSIAPITDFEYSQEFFDHVKKLWDDEGVKACFERSNEYQLIDCAQYFLERIDSVSLVDYTPTDQDLLRCRVLTSGIFETRFQVDKVNFHMFDVGGQRDERRKWIQCFNDVTAIIYVAACSSYNMVIREDNNTNRLRESLDLFESIWNNRWLRTISIILFLNKQDMLAEKVLAGKSKIEDYFPEYANYTVPEDATPDAGEDPKVTRAKFFIRDLFLRISTATGDGKHYCYPHFTCAVDTENIRRVFNDCRDIIQRMHLKQYELL 381
The following BLAST results are available for this feature:
BLAST of TCONS_00026260 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GNAL2.050e-17573.08Guanine nucleotide-binding protein G(olf) subunit ... [more]
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