TCONS_00026286 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026286
Unique NameTCONS_00026286
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length119

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026286 ID=TCONS_00026286|Name=TCONS_00026286|organism=Clytia hemisphaerica|type=transcript|length=119bp
tcttcatcttcatatTCAAAAAGTTTgCATTAGTCCATTGGGTAGCAAAG
AAAGGACAGCAAGAAATTTTAGTATGGCTGGCTCAAAATAATGCCGATCT
TGCAAATAAAACGGTAAAG
Run BLAST on NCBI

transcript from alignment at sc0000566:184531..185168+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026286 ID=TCONS_00026286|Name=TCONS_00026286|organism=Clytia hemisphaerica|type=transcript|length=638bp|location=Sequence derived from alignment at sc0000566:184531..185168+ (Clytia hemisphaerica)
tcttcatcttcatatTCAAAAAGTTTGTAAGTATGATTGATCGTCGTTTA
TTTTAATCAATCATCTAGTTTCGCCGAGAATGCACCTTTTCGACcttagt
cgcgcggtcaggcgcgggccactttattatttaattatccccctaaactc
gatccaactCTTTTTCTtgcacctttttctattgtctataggtgcaaaaa
aagactgggatggTCTTAaagtggtaaaacggacaaaaaatgcccgcgcg
gcaattggcggctacggtcgaaatgGTGTATTTAACTCAGGTCTTAAGGG
CAATGATAAAACTCATAACACGTAATCACAATTTGCAATATAGAATACCT
TCGGAGTTTGTGTCTattctaaagtctgtctcaatataattttcaGCGAA
GACAAAAAAGACTGTAATACTTTTGATAAATTTAGAATTGAATAGCGGTT
atttgcttgttgaaaagatattcaaaatggAATGTGACCAAATAGTGCTT
TGTTATTACGAAAACTATTTTAAagatacttttctttttttacaggCATT
AGTCCATTGGGTAGCAAAGAAAGGACAGCAAGAAATTTTAGTATGGCTGG
CTCAAAATAATGCCGATCTTGCAAATAAAACGGTAAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014769XLOC_014769Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026286-exon-sc0000566-1491911889:184531..184556TCONS_00026286-exon-sc0000566-1491911889:184531..184556Clytia hemisphaericaexon
TCONS_00026286-exon-sc0000566-1510915933:184531..184556TCONS_00026286-exon-sc0000566-1510915933:184531..184556Clytia hemisphaericaexon
TCONS_00026286-exon-sc0000566-1575043694:184531..184556TCONS_00026286-exon-sc0000566-1575043694:184531..184556Clytia hemisphaericaexon
TCONS_00026286-exon-sc0000566-1491911889:185076..185168TCONS_00026286-exon-sc0000566-1491911889:185076..185168Clytia hemisphaericaexon
TCONS_00026286-exon-sc0000566-1510915933:185076..185168TCONS_00026286-exon-sc0000566-1510915933:185076..185168Clytia hemisphaericaexon
TCONS_00026286-exon-sc0000566-1575043694:185076..185168TCONS_00026286-exon-sc0000566-1575043694:185076..185168Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000566supercontigsc0000566:184531..185168 +
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026286 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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