TCONS_00026317 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026317
Unique NameTCONS_00026317
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length851

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026317 ID=TCONS_00026317|Name=TCONS_00026317|organism=Clytia hemisphaerica|type=transcript|length=851bp
TGTCAATGGAAACACCTGCCATGACTTCTTTTGCTACAAATTCAACAATT
TCTGGTAACAATCGAGTTTTAACCTCAAAACATAGTGGaGCAAGATCAGT
GCCACGATCAATAAGTACACCTGGAGCAGGCAAAAACAACATGCTTTTGA
TAGCTATTGCTGAAGGAAGAGGGCTAGCTAAAGGAGAAATTGGACTTACA
AGTTTAGACTTCAAAGCTTCTGAAATGGTTCTTTCACAGTTTTCAGATAA
TGCAACTTATGTGAAAGTATTGACCAAAATTCAAGTGCTGCAACCAAATG
AGATAATTATGCCTACAACGGCTTGTGAAAACGGGAATATGTCTCCATTA
TTTGAAGCTATATCTCAACAAAATCCACATATTAATTTAACAACTGTCCA
AcgaaaatatttcaatgaaacTAAAGGCTTAGAATGTATCAAGGATGTAT
GTGTTCCAGAATTTCAAACAGTTGAAATGGATGTTCAGAACAAATATTAT
TGCCTGGCTACTACTGCAGCGTTAGTGAAGTATACAGAGTTTGTTTACAA
CATGGTATTAGCTGCCAAATCATTGAAAGTTCTTTTCAAAGGTGGTGAGA
AGACAATGTTGATAGATGTACTTGAAAGGTGTTCTGTGCCTCTTGGCACT
GTATCAAGTCCAATGTTATATCAAGCATGAAGAAGGACGAGGACCGATGT
ACAAGCTAAGTGCTGTTAAAGACACCTTCTTGGAAAGATATGGTGTCTCT
TGGGATAGACCGTCATTTGGTCAAAACCTTATTGGAAGACATCGTCAATA
TCCTGTCAAAAGAACCCTCATCCAATTCGAAAACCTCCCAGCTAGTGTCT
G
Run BLAST on NCBI

transcript from alignment at sc0000569:27..10790-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026317 ID=TCONS_00026317|Name=TCONS_00026317|organism=Clytia hemisphaerica|type=transcript|length=10764bp|location=Sequence derived from alignment at sc0000569:27..10790- (Clytia hemisphaerica)
TGTCAATGGAAACACCTGCCATGACTTCTTTTGCTACAAATTCAACAATT
TCTGGTAACAATCGAGTTTTAACCTCAAAACATAGTGGGTAAGATTTCAT
ATCTGATCTTTACATTTTTTAACTTATTTCTTAAGACAATCCAATAGGAA
ATTTTGCGCTGTTTTCAATCCCAGTTTAGCTGTTTACGTCCAAAATGATA
TAGAGTAAGCTGTAGACCTGAACGTACTATTTTGCTTTTTTGTTAAAGTT
TTTAATTTAAGGGATAACTCTCATTCCTTGCCACTGGACTGACAAAATTA
TTAACTCGGATTGTATCAATACACCTTTTCGACCGTAGCCGCAAATTGCC
GTGCGGGCATTTTTTACCACCCTAAAACCATCCCAGTCTTTTTTTCGCAC
TTAAAGGCAATAAAAAAAAGTGTAAAAAAAGGATTGAATCGAGTTTAGGG
TGGCAAATTAAATAATAAAGTGGCACGCGCTTGACCGCGCGACTACGGTC
GAAAAGGTTTATATTTAATAACTATAAGATCACAGATATATTTGTAATGA
TTTGGCTTGAAGTTAAGAACTGTTTTAGAGGCTGCTCTTTACAGATAACT
ACTTATCGGTTCGATAGGCTTTAGTATGAATTTCTTCGGATTATTCTAGC
TCACTAAAGTCGAGTCGCTGAGTAACTTAAAAGTGACTACCTATCTGTTC
GATAGGCTTTAATATGAATTTCTTCGGATTATCGTAGCTCACTAAAGTCG
AGTCTCTGAGTGACTTAAAAGCTATCAAAGTATGGTTACCCTGATCGATA
GTTATCAATTACTCTCTAAGACTATCAAAAAGGTGTAATATTGGTAGTAA
AAATTGGTCACTGTATGAGTTTTTCTTTTCATTTCTTCAGAGCAAGATCA
GTGCCACGATCAATAAGTACACCTGGAGCAGGCAAAAACAACATGCTTTT
GATAGGTAGAAAAGCTTTCATAATTACAATTAGGTGGATTAAGTGATGTC
TGTCTCAAAGATAATGCGGACACTTTTCTGTGATGTTGGTCATTTTTGAT
CACTTTAGGCCTACTTCAAAGGGCTGTAACTTTTCATCCAAGTAAGATAC
TAAAAATCTGAACACATGTTTGAAATAAGTAAGGCTCAAATATTCTAAAA
ATCTTCATGTCATTATTTTTAAATCAGTAGAACAAATCTTAATTTTTTCA
TCTTCATTTTTCAATTTTTCTTAAATCTTTCATCCTTTAGATTATTATCC
TTGGAAATACCTTTCCAATGGTGCATAACTTTATAACTCAGCATCCAAGC
TTGTACATAACGTTGATTTATCGTTTGAACAATGTTCATAACGTCCATAT
AACGTCTGGTGAACGTTGAATCAACGTTGTGTGTCAGCTGGGATAAAAAG
GTGCTGAGAAAAGGTCAAATTAAAGTATTCACGTACTTTTGAGACAGACT
CTAATTTGTATGATTTATTCTGTAATTCTAAGAAACCAATGAACAAAGCT
GGTTCAATATTGTTTCCTTTAACTTTTTGACAGCATCTGTGTTTTCTCTA
TAGTGTATTTAATTATAAACCTCTACTTACTTGAAAAATCGGCCAAGCAC
TCGTGGAAATATTTCTTTCTCTTTTGTAGCTATTGCTGAAGGAAGAGGGC
TAGCTAAAGGAGAAATTGGACTTACAAGTTTAGACTTCAAAGCTTCTGAA
ATGGTTCTTTCACAGGTATGAAAATATTGCATCATTAATATTGATATTAT
ATTGATATTATTTANTTTGTCAAGAATAACTCTATCGTTCGCCGTCATAG
TGTGTGTTCTCTAAAGGTCCAAAAGCAAATGTCTAATTTTTTGAAAATAA
CAATTTTAGAGCTAATCAAATTATCAATTTTAGCAGCTATCTTTGGGAAT
GAGATCTATTGGAAGCCAAGGCTACTGGGCTAAAATCAGACTGACAAGTA
AAAAAATCTCTCCTTTTAGGTATGTCAATGGAAACACCTGCCATGACTTC
TTTTGCTACAAATTCAACAATTTCTGGTAACAATCGAGTTTTAACCTCAA
AACATAGTGGGTAAGATTTCATATCTGATCTTTACATTTTTTAACTTATT
TCTTAAGACAATCCAATAGGAAATTTTGCGCTGTTTTCAATCCCAGTTTA
GCTGTTTACGTCCAAAATGATATAGAGTAAGCTGTAGACCTGAACGTACT
ATTTTGCTTTTTTGTTAAAGTTTTTAATTTAAGGGATAACTCTCATTCCT
TGCCACTGGACTGACAAAATTATTAACTCGGATTGTATCAATACACCTTT
TCGACCGTAGCCGCAAATTGCCGTGCGGGCATTTTTTACCACCCTAAAAC
CATCCCAGTCTTTTTTTCGCACTTAAAGGCAATAGAAAAAAGTTAGTGAA
TCGAGTTTAGGGTGGCAAATTAAAATATAATAAAGTGGCACGCGCTTGAC
CGCGCGACTACGGTCGAAAAGGTGTATATTTAATAACTATAAGATCACAG
ATATATTTGTAATGATTTGGCTTGAAGTTAAGAACTGTTTTAGAGGCTGC
TCTTTACAGATAACTACTTATCGGTTCGATAGGCTTTAGTATGAATTTCT
TCGGATTATTCTAGCTCACTAAAGTCGAGTCGCTGAGTAACTTAAAAGTG
ACTACCTATCTGTTCGATAGGCTTTAATATGAATTTCTTCGGATTATCGT
AGCTCACTAAAGTCGAGTCTCTGAGTGACTTAAAAGCTATCAAAGTATGG
TTACCCTGATCGATAGTTATAAATTACTTTCTAAGACTATCAAAAAGGTG
TGATGTTGGCAGAGTGGGTCACTGTAGAGTTTTCTCTTTTCATTTCTTCA
GAGCAAGATCTGTGCCACGATCAATAAGTACACCTGGAGCAGGCAAAAAC
AACATGCTTTTGATAGGTAGAAAAGCTTTCATAATTACAATTAGGTGGAT
TAAGTGATGTCTGTCTCAAAGATAATGTGGACACTTTTCTGTGATGTTGG
TCATTTTTGTTGTTCTTGGTCATTTTTGATCACTTTAGGCCTACTTCAAA
GGGCTGTAACTTTTCATCCAAGTAAGATACTAAAAATCTGAACACATGTT
TGAAATAAGTAAGGCTCAAATATTCTAAAAATCTTCATGTCATTATTTTT
AAATCAGTAGAACAAATCTTAATTTTTTCATCTTCATTTTTCAATTTTTC
TTAAATCTTTCATCCTTTAGATTATTATCCTTGGAAATACCTTTCCAATG
GTGCATAGCTTTATAACTCAGCATCCAAGCTTGTACATAACGTTGATTTA
TCGTTTGACCAATGTTCATAACGTCCATATAACGTCAGGTGAACGTTGAA
TCAACGTTGTGTGTCAGCTGGGATAAAAAGGTGCTGAGAAAAGTTCAAAC
TAAAGTTTTCACGTACTTTTGAGACAGACTTTATAAGTTTGTATGATTTA
TTCTGTAATTCTAAGAAACCAATGAACAAAGCTGGTTCAATATTGTTTCC
TTTAACTTTTTGACAGCATCTGTGTTTTCTTTATAGTGTATTTAATTATA
AGCCTCTACTTACTTGAAAAATCGGCCAAGCACTCGTGGAAATATTTCTT
TCTCTTTTGTAGCTATTGCTGAAGGAAGAGGGCTAGCTAAAGGAGAAATT
GGACTTACAAGTTTAGACTTCAAAGCTTCTGAAATGGTTCTTTCACAGGT
ATGAAAATATTGCATCATTAATATTGATATTATATTGATATTATTTAGCT
CGACGTAAAGTTAGACAAAATCCATAATTTACAAATAAACACCCCTTCTC
ACAGACCCACTGGAACCTTTTCCCGCTGGAAAAATTCAATTGACCAAAAT
ATACTGGCCAGTGAAAAAATTATATTCTGATTTTTGTTCCCACTGAAAAT
AATCAGATAATCAAATCCTCACTGAAAAATCTTTTGCTTTTCTTTCCGAT
TTATTGAGCAGCAATCTGGCTTCATACTATTTAAAATCTATTTTACGTTG
GGCTCTGTAATCTTGTAAAAAGCAACAGCTACATTCGGCTAATTCGGCTA
AAATTTTCTTTACAGTTTTCAGATAATGCAACTTATGTGAAAGTATTGAC
CAAAATTCAAGTGCTGCAACCAAATGAGGTAGATTGAGTTTTTCTTTATT
TCATGATATATACTATCTTCTTCACCCATAATGCCTATTCAGAACCAAAA
TATTACCAAAATAGTTCTAGTGCTTGAATTTCTAATTGGATGAATTTTTG
ACAAAACTATTCCATTTCTTTTCTTAGATAATTATGCCTACAACGGCTTG
TGAAAACGGGAATATGTCTCCATTATTTGAAGCTATATCTCAACAAAATC
CACATATTAATTTAACAACTGTCCAACGAAAATATTTCAATGAAACTAAA
GGTTTGTAAAGCAAAGTCATTTCTTCAATTTGCTGAGCGGTGTCTGACTT
TTATGAACTGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAAAGCAACAGCTA
CATTCGGCTAATTCGGCTAAAATTTTCTTTACAGTTTTCAGATAATGCAA
CTTATGTGAAAGTATTGACCAAAATTCAAGTGCTGCAACCAAATGAGGTA
GATTGAGTTTTTCTTTATTTCATGATATATACTATCTTCTTCACCCATAA
TGCCTATTCAGAACCAAAATATTACCAAAATAGTTCTAGTGCTTGAATTT
CTAATTGGATGAATTTTTGACAAAACTATTCCATTTCTTTTCTTAGATAA
TTATGCCTACAACGGCTTGTGAAAACGGGAATATGTCTCCATTATTTGAA
GCTATATCTCAACAAAATCCACATATTAATTTAACAACTGTCCAACGAAA
ATATTTCAATGAAACTAAAGGTTTGTAAAGCAAAGTCATTTCTTCAATTT
GCTGAGCGGTGTCTGACTTTTATGAACTGTGCTTTTTATTCCTTTTGGCA
CTAAATAAATAAATGGACAAAAGCGATATACGGTTCCAAGGCTTTAACAT
GTTCAATTTTAAATATGTACGATCAATTTTATGTTGACCTTTTGTTTAAT
GTTTTTTGAGGTAAAAATTCCTACTGTTTCAATATATTTTATCATAATTC
CTCTCTTAATTTTGATTTTTTCTTTGAAGGCTTAGAATGTATCAAGGATG
TATGTGTTCCAGAATTTCAAACAGTTGAAATGGATGTTCAGAACAAGTAA
AATTTTCTATTATTCTTATGAGGGCATAGTATTTTCATTAACATTCAGTG
TCCCGAAAAAAAATAAAAAGAAATACCTTATTACACGGAATGTAATTAAC
ACGAATTAAGAAATTTCGTGTTAATTAAAACCCCTTTAATTAAAACCAGC
CGTGGTGTCCTTGAAAAAGCAAATAAAATTTGTGTTAATTTTTTGCTTGT
TAATTCCAAGGCCGTTGAATACTTGTCTAGTAATATTCGTGTAATAATGT
AGTTTGACCCATAAGGCCGATAACGTTGCGCCTGATTCAAACTTGATACT
TGAAATGATACGAAGGAGAATCTTTTGAGAGTACCCATAAAGAAAGCTCA
ATCAGTCATTGGCATGTATATCTCAAATTCTGAATAATGTTTGCAAATAA
TGGCTGAAAACTAGGCTTGATTATTAAACAAATAGTTTGAACAAGGATTG
ACGTAAAATAAAGTTTGTTTCCTTATCTTTTTAGATATTATTGCCTGGCT
ACTACTGCAGTAAGGATATTTCTTATGGAATTCTTTTTTCTATTCCGGGT
TAGAGTTTAGGATCCAGTATCTTAATCCATAGCCCAAAACATTTTACATA
TTTGAAAGTTGTAAACACCGTGACCCCTAAAATTAATGTACCAACTTTAT
AAAAACAATCCACTATTCCTGGGTTCGGTATCTGGATTCTGTTCCCCTGC
TAATTTTTCTCTAGATGAAATAAACTTTTCAGCCTCATTTGATGGGAATA
TTCGAAATGGAATAATTCGAAATATTTCTAAAATACGCCCCCATGCAAGT
TTAGGTTGTAAACACTTGTTAAGACTCTACGCTTCACATCAGATAATTTT
AAAACGAACGGATTTTATAGTCCGACATGTTTAATTGTTTAAAGACACTT
TATTTTCATTGTTTCTGATGGTGAAAAGGAAAAGGTTTGTACTAGAAAAG
TCGTCAATGGTTCATAGGAAAATGGGCGGGACTATAAAAAACCTATTTAT
TCTTGTAAATTGATCGAGCTTCTTCTCTTTTGTTTTTCAGGCGTTAGTGA
AGTATACAGAGTTTGTTTACAACATGGTATTAGCTGCCAAATCATTGAAA
GTTCTTTTCAAAGGTGGTGAGAAGACAATGTTGATAGGTAAGTTTTCTTT
AATTGCAGTAGGGAGTGTCCCAAAGGTTCGATAGCTTCTTACCAAAAGGT
AATGAAAGTGCTACTCTCTCCCTGGATCGCCCCACTTACCCTTGATCCTT
CTTTTTAATTGGCTTTCACTAAACAGATAGACATGAAGTCTTTGAGGTCC
TTGGTTTTACCGACCATGGGTTGAACCCATGACCTTTCATATCATACTCC
ATTTTAGAGTGGTCTGATCCAGAGTACTATAATTTCTAAAAAAATATTTA
AGAGGATGAAGCTGAAAAACGAAGAAATGAACTTTTTTTAAGACTCCTGG
TTCCAGCAAAATAGTTATTTTTCCATTAAGTTCTTGCATCGAGCTAGCTG
GGAGACCCGACTTCTCTGTCTATGTGGTTTCAAAAAAATATCAAAGTATA
GACAGTAGTAGCCGGGAATTATACAAGATGCAAGAATTAATCGCANNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNTTTGCAGCCGTCATTACGGCTGTTTTATTTCGTTTA
TATTTGTCACTTTTCTATATAGACTGTAATGGCCTGTTCCATTTGATATA
CATACAGGTGGTAAAACAAACCTTTCCAAGCCAAAAATTTCTTGAAAATA
ATATATTTAGATACCCCCTGGTGGAGTAGTGGTATGGTGGTCATCGCTCT
TGACTCCCGTCTGAGAGGCCCGAGTTCGATGCTCACCATGGTACTTTGAT
TCACTTGGCAAGTGAATTTATCTTCGCCCGGGTCAACCCATGCCATGTGA
GAGGAATTGGGTACCACTACTCTGATACAAGAGTGTGGGTAGATGTGCCG
TGCATTGTGACGTGCCGCGACACTTGTTACAGGTTCGAGTGTCAAGGTAT
ACGCCAAGACTCGGCAGCTCGCACCTGTAGAGTCGCAATGCGTGGCAGCG
CAGTGTTTCCTACTCTCTCGTAGGTAAGAAACATTCCGAGATATGGGAGG
GCTTAATATCAATCAAAACAATCCCCCCTGGAAAATGGTAAAATTTGAAA
ATAAAAAGACCTTGGAAAAATTCTTCTTCGTACCTTAGAGTGGGAGTGGA
CAAACTAAAACCAGTTTTATACCCCCTGGAGGAATTTGAATATTATTTAC
CTCCTGGAAAATTAAATTAGGTCCCTGGAAATATAAACTTTTCGTTTCAC
CCCTGGTAAAATAAAAATAATTTTCCTTAGACCACTCGGATCACTCCTTG
GGAAATTTCATCAACCCCATGTATAAATATTAAACGGAATGTTCCTGTCT
AAAGCGGGCTATCTGTCATTTTCTTGGATCTTCTGAACGAAGAAAACAAT
GTTTATAGTTTATGTTTTCTAGATATTAGAAGCCTATTTCGATTCCATCT
ATGACTCCATGTACATGTTTTTTTTATAAGAACAAATTATATAAGAACAT
AAGGCTTTGCTGGCCAAAATGTTAAGAACAAGTTAAAAACATTTTAAGGC
TCTGCGGACTCAAAACACCCTATTTCTTCAGATTTCTCTGGAAAATGGTC
AAAATAAGAACATGTTAAAGAACATTTTTAGGCTTAAAACTCAAATAGTT
AGGAACATCAGAAGGCTTCAAAAATTTTGGATGTTCTAATAAAAAAAACA
TGTATCGGTCACGTACCATTTTCCCACTATTTTCCATTTTTGTTGTCTTT
TGTAATACTTTTAATCACAAGATAAAGAGTGCTCAACCTTAATAAGTGGA
TCACTACAGTGACAGTAGAAAAATATCATGTACTAAAAAAAAAACATGCA
TCCTATCCTAATGTTTGTACCTCATTTACGCGATGAGCAGATGCCAATGC
AGCAAAATGGGGTTTTCCAGAAAAATATTTAACCCCAACTGTTGAGGATA
TTGATTTTGCCAAGTATCGAACCCTCTGGATATCCACTCTTAAAAATTAG
CTCAACTCCCTGGATATTCTCTCTTATAAAGATGCTTACCCCTGGATATC
CACTCCTTCGTAGATATTTAACCCCCTGGATATCCACTTTTGAACAAAAT
TCGTTAACCCCCTGGATATCCGATATCCTCGACAGGGGGGAACGGACTAT
TTCTGGAATAGCTCGATATCCTATGGTTTAAAAAGCCGGACTCATCAAAA
CATTATTCGGAGCTTTTTTCCATTTGTGGTTTGTGAATAGCAACTTTTAG
TCTTAAGGGAACAAAAAATGCCGCAAAATACATTCGGTGCTAAATTGACA
GTTTTCTCATTCAGTCCCTCGTGTGCAGGTCAAGCCACACCTGTTGCTAA
TCACGAGACAAGAAGAAAAAAAAAACTGTTTCTAAATCTAAGTTTTTAAT
CAAGCACACTTCCAAATAGTTGCACATGGAGATAGAAGAAGTAATTAACA
ATTAATAACAATTAAATATTCGTAAAATTTACTAATTACTTAGTTTCGGC
ATTTATCACAACTTGTATAAATAGGGATAAAAAATTCAAGAGTTCACCAT
CAAACGTTTTCAACCTTCATCAAGTGAAGTGGTTTGGCGAACAAGAAAAA
TCTTCAGATTACAATTTAGAACGTAAGTCGTACTGCCAGTTAGTGATTTA
GTTAACCTTTCAAAACATTTAAAATGTCCCTGTTTCAAGTAAACGCGCCT
CCAAGAAAGAAGGCGTTCATTATTCAAAGAGGGGCGTTTATCGAAGAGGT
GCATTAAAAAGGAGGCGTTCATTCGCAGGGGGTATTTATTCAGAGTAATG
CGATATTTCATACATAGTAAACCAGCGTGTTTTTTTGCGACCCTAATACT
AAATCCTAATCGTTTTCTTTCTTTATAGATGTACTTGAAAGGTGTTCTGT
GCCTCTTGGCACTGTATCAAGTCCAATGTTATATCAAGCATGAAGAAGGA
CGAGGACCGATGTACAAGCTAAGTGCTGTTAAAGACACCTTCTTGGAAAG
ATATGGTGTCTCTTGGGATAGACCGTCATTTGGTCAAAACCTTATTGGAA
GACATCGTCAATATCCTGTCAAAAGAACCCTCATCCAATTCGAAAACCTC
CCAGCTAGTGTCTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014790XLOC_014790Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026317-exon-sc0000569-1575043694:10703..10790TCONS_00026317-exon-sc0000569-1575043694:10703..10790Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1575043694:9836..9900TCONS_00026317-exon-sc0000569-1575043694:9836..9900Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1575043694:7093..7178TCONS_00026317-exon-sc0000569-1575043694:7093..7178Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1575043694:6663..6725TCONS_00026317-exon-sc0000569-1575043694:6663..6725Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1575043694:6390..6513TCONS_00026317-exon-sc0000569-1575043694:6390..6513Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1575043694:5195..5261TCONS_00026317-exon-sc0000569-1575043694:5195..5261Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1575043694:4682..4706TCONS_00026317-exon-sc0000569-1575043694:4682..4706Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1575043694:4054..4150TCONS_00026317-exon-sc0000569-1575043694:4054..4150Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1575043694:27..262TCONS_00026317-exon-sc0000569-1575043694:27..262Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1510915933:10703..10790TCONS_00026317-exon-sc0000569-1510915933:10703..10790Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1510915933:9836..9900TCONS_00026317-exon-sc0000569-1510915933:9836..9900Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1510915933:7093..7178TCONS_00026317-exon-sc0000569-1510915933:7093..7178Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1510915933:6663..6725TCONS_00026317-exon-sc0000569-1510915933:6663..6725Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1510915933:6390..6513TCONS_00026317-exon-sc0000569-1510915933:6390..6513Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1510915933:5195..5261TCONS_00026317-exon-sc0000569-1510915933:5195..5261Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1510915933:4682..4706TCONS_00026317-exon-sc0000569-1510915933:4682..4706Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1510915933:4054..4150TCONS_00026317-exon-sc0000569-1510915933:4054..4150Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1510915933:27..262TCONS_00026317-exon-sc0000569-1510915933:27..262Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1491911889:10703..10790TCONS_00026317-exon-sc0000569-1491911889:10703..10790Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1491911889:9836..9900TCONS_00026317-exon-sc0000569-1491911889:9836..9900Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1491911889:7093..7178TCONS_00026317-exon-sc0000569-1491911889:7093..7178Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1491911889:6663..6725TCONS_00026317-exon-sc0000569-1491911889:6663..6725Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1491911889:6390..6513TCONS_00026317-exon-sc0000569-1491911889:6390..6513Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1491911889:5195..5261TCONS_00026317-exon-sc0000569-1491911889:5195..5261Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1491911889:4682..4706TCONS_00026317-exon-sc0000569-1491911889:4682..4706Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1491911889:4054..4150TCONS_00026317-exon-sc0000569-1491911889:4054..4150Clytia hemisphaericaexon
TCONS_00026317-exon-sc0000569-1491911889:27..262TCONS_00026317-exon-sc0000569-1491911889:27..262Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000569supercontigsc0000569:27..10790 -
Expression

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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.05101e-05	0.000300771	5.91007	0.046404	3.34434e-07	1.45507	2.39801	1.70685	0	0	3.92743	0	0	0	0	0	1.13807e-06	0	0	1.6424	0	1.4999	0	3.66296	0.532695	0.0766697	1.21739	2.00272e-09	0.000133602	0
Blast
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BLAST of TCONS_00026317 vs. Swiss-Prot (Human)
Match: MSH4 (MutS protein homolog 4 OS=Homo sapiens GN=MSH4 PE=1 SV=2)

HSP 1 Score: 199.134 bits (505), Expect = 1.754e-57
Identity = 90/158 (56.96%), Postives = 122/158 (77.22%), Query Frame = 3 
Query:  144 LLIAIAEGRGLAKGEIGLTSLDFKASEMVLSQFSDNATYVKVLTKIQVLQPNEIIMPTTACENGNMSPLFEAISQQNPHINLTTVQRKYFNETKGLECIKDVCVPEFQTVEMDVQNKYYCLATTAALVKYTEFVYNMVLAAKSLKVLFKGGEKTMLID 617
            +++A+ EGRGLA+GEIG+ S+D K  +++LSQF+DN TY KV+TK+++L P EIIM  TAC  GN + LF  I++   ++N TT+QRKYFNETKGLE I+ +C+ EF TV M+VQ+KYYCLA  AAL+KY EF+ N V A KSLK+ F+G E+T +ID
Sbjct:  156 VIVAVVEGRGLARGEIGMASIDLKNPQIILSQFADNTTYAKVITKLKILSPLEIIMSNTACAVGNSTKLFTLITENFKNVNFTTIQRKYFNETKGLEYIEQLCIAEFSTVLMEVQSKYYCLAAVAALLKYVEFIQNSVYAPKSLKICFQGSEQTAMID 313
The following BLAST results are available for this feature:
BLAST of TCONS_00026317 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MSH41.754e-5756.96MutS protein homolog 4 OS=Homo sapiens GN=MSH4 PE=... [more]
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