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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026325 ID=TCONS_00026325|Name=TCONS_00026325|organism=Clytia hemisphaerica|type=transcript|length=697bp
ATCGGGctagaaaatcggaaaaaaaacGGGGAAATGGGACTTTTCTATAC
CGTTTCAGCCAGTCGGGACTTGTTTTATAGCAGTCGCCTTCGACAGGACA
TTTGGTGTTTATGGTGTTTTTAGAAATTGAACCTTTCATACTGGAAAGTG
TTTTCTGCAAACCAGCTGAACTAAGCAGGAAAAAGACAAATGACTACCAA
AGCATTTATGGAGATGTACCTTAAAATGGACTCTTATGATGAGATGActa
tcaaaaatgaaatatctaTTACAATCAAGAGAGGGGAGGAGAACTCTTTA
ATTACaagtataaaaatcatactttttcTCCATTGAATTTTATAAATGAT
CAGATGTTTATTCTAACATGGATGGGACCAATAGCAgaaataacaagcaa
acaaacaatatAAACAGGGTAATGAACGAGTATGAACAAGATTATTAAAG
TCCTTTGGTCCAAACTGGTCCAAATGTTAAAAGTGAGTGGCAAAATGAAT
GTTATAAAGATAATATTTAttataaatttatcaatttaccTTATTGATAg
aattatctttttttaaacgctgatttttctgaagaaaaaactAGCAGAAA
AGTTGTAAATACAATTTTTGGAACTGAgacgtttttttaaaagaagatca
aaaattttttaagcctatcggtatttttgactttttgaattttaaga Run BLAST on NCBI transcript from alignment at sc0000569:18559..20161- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026325 ID=TCONS_00026325|Name=TCONS_00026325|organism=Clytia hemisphaerica|type=transcript|length=1603bp|location=Sequence derived from alignment at sc0000569:18559..20161- (Clytia hemisphaerica)
ATCGGGCTAGAAAATCGGAAAAAAAACGGGGAAATGGGACTTTTCTATAC
CGTTTCAGCCAGTCGGGACTTGTTTTATAGCAGTCGCCTTCGACAGGACA
TTTGGTGTTTATGGTGTTTTTAGAAATTGAACCTTTCATACTGGAAAGTG
TTTTCTGCAAACCAGGTAAGCAAGGTGTTTTTAAAAACATGAATGGTTCA
GGCTCATAGTTATTTGTGTGACAACTTACTTACCTCCAATCCTTGCAACT
TGTTCAACTCAATTTTAAATTAGCTAGAATTGAATTTAAAAATTTGGTTC
TATGTCTCTTAAAGCTAGGAAACAATTCCAATTTTCGATAATTTTTTTAA
CACGTGCTAGTACAATCTGAAGCTAAACTAAACTAAATACTATGATTTTT
TCAAAGTAAAGTTGCCATTGAAAGTATGATCTAGCAAGCTATTCCTCAAG
TGGCATGAAAAAAAAACAACAAATATGAAATTAATCCTATTAAAAAACAA
TAACCTTTTTTTATAAACCATTTTTACATTCCCTCATCTGGTAGTTTAGG
GTAATCAAAAATAACAACTTCTTCTAGATTGTAGGGGCTATTTAAATCTG
ACCATAAAAGGAAGCTGTTAATTTGGCGTGATCAGTTCTTATACTTAGTC
TGAGTGAAAATTCCAAAAATTTCCCTCTTTATTCTTTTAGCTGAACTAAG
CAGGAAAAAGACAAATGACTACCAAAGCATTTATGGAGATGTACCTTAAA
ATGGACTCTTATGATGAGATGACTATCAAAAATGAAATATCTATTACAAT
CAAGAGAGGGGAGGAGAACTCTTTAATTACANNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATGTGAGGGGAATTGG
GTAGTCAGTTCAAGGTGCTGACGGGATGCTTACTCAAAGCATCTATAGTT
GCGAAAATGGGCTCCCAGAGCCTTCTGTAACTCAACCATGATAGATAGAT
AGATAGATTACAAGTATAAAAATCATACTTTTTCTCCATTGAATTTTATA
AATGATCAGATGTTTATTCTAACATGGATGGGACCAATAGCAGAAATAAC
AAGCAAACAAACAATATAAACAGGGTAATGAACGAGTATGAACAAGATTA
TTAAAGTCCTTTGGTCCAAACTGGTCCAAATGTTAAAAGTGAGTGGCAAA
ATGAATGTTATAAAGATAATATTTATTATAAATTTATCAATTTACCTTAT
TGATAGAATTATCTTTTTTTAAACGCTGATTTTTCTGAAGAAAAAACTAG
CAGAAAAGTTGTAAATACAATTTTTGGAACTGAGACGTTTTTTTAAAAGA
AGATCAAAAATTTTTTAAGCCTATCGGTATTTTTGACTTTTTGAATTTTA
AGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026325-exon-sc0000569-1575043694:19997..20161 | TCONS_00026325-exon-sc0000569-1575043694:19997..20161 | Clytia hemisphaerica | exon |
| TCONS_00026325-exon-sc0000569-1575043694:19332..19471 | TCONS_00026325-exon-sc0000569-1575043694:19332..19471 | Clytia hemisphaerica | exon |
| TCONS_00026325-exon-sc0000569-1575043694:18559..18950 | TCONS_00026325-exon-sc0000569-1575043694:18559..18950 | Clytia hemisphaerica | exon |
| TCONS_00026325-exon-sc0000569-1510915933:19997..20161 | TCONS_00026325-exon-sc0000569-1510915933:19997..20161 | Clytia hemisphaerica | exon |
| TCONS_00026325-exon-sc0000569-1510915933:19332..19471 | TCONS_00026325-exon-sc0000569-1510915933:19332..19471 | Clytia hemisphaerica | exon |
| TCONS_00026325-exon-sc0000569-1510915933:18559..18950 | TCONS_00026325-exon-sc0000569-1510915933:18559..18950 | Clytia hemisphaerica | exon |
| TCONS_00026325-exon-sc0000569-1491911889:19997..20161 | TCONS_00026325-exon-sc0000569-1491911889:19997..20161 | Clytia hemisphaerica | exon |
| TCONS_00026325-exon-sc0000569-1491911889:19332..19471 | TCONS_00026325-exon-sc0000569-1491911889:19332..19471 | Clytia hemisphaerica | exon |
| TCONS_00026325-exon-sc0000569-1491911889:18559..18950 | TCONS_00026325-exon-sc0000569-1491911889:18559..18950 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000569 | supercontig | sc0000569:18559..20161 - |
Blast
The following BLAST results are available for this feature:
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