TCONS_00026347 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026347
Unique NameTCONS_00026347
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2481

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026347 ID=TCONS_00026347|Name=TCONS_00026347|organism=Clytia hemisphaerica|type=transcript|length=2481bp
AATGACTTGAAAATCCATCAAACAACAACTCCAAGGGAAAAGCCATCTGC
AGATTCCAAACTGGTTTTTGGTAAACAAATGGCTGATCACATGCTTGTTG
CAGAATGGACCATTGACAATGGATGGGATATTCCAAGTATTGTTCCATAT
GGCCCGTTAGCAATTCCACCTTCTGCTTCTGTCCTACATTATGGCATTGA
GGTATTTGAGGGTATGAAAGCATATAAATGTACCGATGGATCAATACAAC
TTTTTCGACCAGAAGAAAATATGAAACGACTATTTGCTTCAGCTGAAAGG
CTAAGTTTACCTacatttgacAAAGAAGAAGTTTTGAAGTGCATTGCAGA
ACTGGTGCGTGTTGATCAAGACTGGATCCCAGATTGTGACAGCAGTTCAT
TATATATTCGACCAACGATTATAAGTACAGAGCCTTCTCTTGGTGTTAAA
CCACCAGATAGTGCAATGTTGTTCGTCATCACAGGTCCAGTTGGGTCTTA
TTACGACACAGGAAGTTTCCAACCCATCTCACTTTTAGCAGACCCAAGTT
TCGTCAGAGCATGGCCTGGTGGTATTGGAGATTGCAAAGCTGGAGGAAAC
TACGGCCCAACGATATACGCGCAAAAATTGGCTCAAGCAAGGGGCTGCTC
TCAATGCTTATGGCTATACAAAGACCAAGTCACTGAAGTTGGAACCATGA
ATTTCTTCATGTTCTGGGTCAACGAACAAGGAGAACAAGAGCTGGTCACG
CCACCCCTTAATGGCCTGATTTTACCAGGAATCACGCGAAAATCACTCCT
CGACCTAGCACGAGAATGGGATGAATTCAAAGTCTCCGAAAGGGATTTTA
CTTTACAAGAGGTCGCCAAGGCTGCGTCAGAAGGACGAGTGAAAGAAATT
TTCGGTGCTGGCACTGCAGCTGTAGTCAGCCCAGTCGATAAAATTCATta
tcttgatgacgtcatcgaaattGAAAATAACGGATTCCCAATCGCGCAAC
GTTTCTTTGACGAGTTGACGAGCATACAGTACGGACGAACACCTCATCCA
TGGAATTATCTGGTTGACTCGCAACAACTTCGACAAAAACAACCTAACCT
TCAgtaacaacaacaaccactTCTAAATACCTTTCCAaccgaaaacaaaa
aaaatacccTTTTTAccttttatcaaaacttttattcCCAAAACAAAGCT
TTCTGTATTACCAAACCTTTTTAcaaacttgaaatattttatttttaacc
tCTGTAtattattcttaatatttgaaaaacaaaatcttgtaaggataaaa
atgatatttaataaaatcttttaaatttttttttttaaagacaaaaACTC
ATTTTGGATAGAGTTTTACAAGAAATTTGGACTGGTTGCatttctgaaac
aaaaaatcataaattcagATCTCTTGGTATTTGATACTAACACGTGACgt
attttgactgatttttgaatacattttaaataaaagggCGTCCACTGTTT
TCCCATAGTGTAGACGATAAAAAAAGTAacatatttattatttaatCACC
ATCATCATGTATGCATTTTTGtgctattttattttatttataaaattatt
ttaaaaagaaagaaaagaataataaaaatctaattaaatGTGTATGCTGT
ATCAATtagtgaatttgaaaaattgattgcGGCTAAAAAAGCTTTGAGCA
AAATTAatggacataacagtacttgcgaaatttgtaaacaaactgtatgc
agcggatacgaaatcaaaacaaatgtcacatgtcaaaataaaaaatcaaa
ccaaatatggctaattttgattgttcaattgttttacaagtttgttttgg
acacgtgattttaattgttctctttaatgacacgtggttcgcgcaatgtt
tacattttactactttaatgtccctttaaatagtaattgtatactttttt
ttataaggacgaTTAAGGTTAAAAAAAAGATGAGTTTTCGACCAAAGCTG
AGTCTGGAATTTATGAGTTTCAACGAATTCAAGGGTAAAACAAGTAATTA
AGGAAGGAATTTAGCTTCGGGATGAGAACAATCTAAGGCTCAAagcttca
aaaaatgaaaaatccaaGCCTCGCTGTTCATTTGTATTATTGAGTACATC
AGTCAGCGACTGTTCAGTCAAATAATATCTTGGTTCCTTTGAAGCTGGCT
GATCTGATTGATTATCATATACACCCTGTCATTAAATGTACATAAAAATT
CtgcatcatcatcatcatcatcatccatTCCCAAGCTTTTGCATAAGTTA
AATATCATAACAATTTATCACCAGCCTAGTTCATATCTATTCAGTCTTCT
ATGTTCATCAAGCCAATCTTCCAAAGGTTTAAAGTAAGCAATGATTGGCT
TAGAACTCAACGTCTTTGAACCGGTCAGTACTTTTAAAACGTCTGGCCAA
GGAAGACTTTTACCCAATGATAACATTTCCc
Run BLAST on NCBI

transcript from alignment at sc0000569:175690..183169-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026347 ID=TCONS_00026347|Name=TCONS_00026347|organism=Clytia hemisphaerica|type=transcript|length=7480bp|location=Sequence derived from alignment at sc0000569:175690..183169- (Clytia hemisphaerica)
AATGACTTGAAAATCCATCAAACAACAACTCCAAGGGAAAAGCCATCTGC
AGATTCCAAACTGGTTTTTGGTAAACAAATGGCTGATCACATGCTTGTTG
CAGAATGGACCATTGACAATGGATGGGATATTCCAAGTATTGTTCCATAT
GGCCCGTTAGCAATTCCACCTTCTGCTTCTGTCCTACATTATGGCATTGA
GGTTTGAACTTCTTTTTTTTCTAGTCGCAGTCATTTGTTCTTCTGAACAA
AAACTGAATTCCAAAAAGTCATNTTTTTTTTGATGGTAATTCATTATTTC
TAAATACCACAAATCACAGCATCAGCTGTAAGCAATTTATCATGATTAAA
GGAGTGTGTGAGGTAGATAATTAGAAATTTCTCTACAAAGTCTTTTAAAA
TTTGTATACTTTGTGGTGGGGTGTTAAGCTTTATATTTCCAATGTCAGAT
TGTGCTGCTCAACATTCCATTACATTCCAGCTAGGTTGACAATAAATTAT
TTCAAGAAATAAAAAGTACATACTTACATTTTTATGACTTCTTTGTGTTT
AGCAGAAAGAATTAAAAAAAAAATGGTAGTCACAATCTCCATCAGAAATT
TTCTTCGAGCACAGGTAAAAATTTATTTCAAGTAGTTTTTCAACAAAAAG
GCTGTTTTTGTAACTTTTTGAGTACAAAAGTTTAGCAGAGTTATTGTTAA
CCACACTTTTACTTTTTGAAAGACAGTAAAAAATGTCTACAATATACAAC
TGTTAAGAGTAAGTTTTCATAATATTCTTATTTTTCAGAAATTAAACAAA
GTCAAAGGCGCTTTATCCATTGCGTCGAGATCCTTCTCAGAAATCAGAGT
AAGTTTTTATTAACATTCTGTTGTTTTTTTATTTTGTGTAAAATTCCAAT
TGTACATAAAACAACTATCTCTAAATGTAACTTAGAAGTTAGTGTAATCA
ATTTCTTTATAACATTATTATCTATATTTTTAAAGTACAATGACTTGAAA
ATCCATCAAACAACAACTCCAAGGGAAAAGCCATCTGCAGATTCCAAACT
GGTTTTTGGTAAACAAATGGCTGATCACATGCTTGTTGCAGAATGGACCA
TTGACAATGGATGGGATATTCCAAGTATTGTTCCATATGGCCCGTTAGCA
ATTCCACCTTCTGCTTCTGTCCTACATTATGGCATTGAGGTTTGAACTTC
TTCTTTTTCTAGTCGCAGTCATTTGTTCTTCTGAACAAAAACTGAATTCC
AAAAAGTCATGTAGGTTAAATTATAGAATGCCTGTGGGTTGAAGGTTTAT
AAAAAACAGTAAGAACAAAAACGTAAGACGGAAATTTTTCCCGAAAATTT
TAAGTATAGGGGAAAATTTTTCAAATCAAAATCAGGGTGGGTACCCTGAT
TTTGATTTGAAAAATTTTCCCCTACATCCAATAAGATGATCTCAATTCGT
TTTCTAAAAGATTTGTATTCAAATAATTGGTAGTTACAATATTATATTAC
ATTTCATTTTTAGGTATTTGAGGGTATGAAAGCATATAAATGTACCGATG
GATCAATACAACTTTTTCGACCAGAAGAAAATATGAAACGACTATTTGCT
TCAGCTGAAAGGCTAAGTTTACCTGTAAGTTTTGCACCAGATAGCAAACT
TAAATAACGAGTCTTAAAAAGTACAAAAAAAATTTAGGTTTTATTTTTCC
CCTATCTGGGAAAGGTTCAACATCTGCTTCTAAGGCCTTACTGGATTGAT
CCTAACCAATTTTTTGAAGGTGGCTTTTTTTTTTAGACATTTGACAAAGA
AGAAGTTTTGAAGTGCATTGCAGAACTGGTGCGTGTTGATCAAGACTGGA
TCCCAGATTGTGACAGCAGTTCATTATATATTCGACCAACGATTATAAGT
ACAGAGGTATTGTTCCTATCTGTGACTGCTTAAAATTTTTGTCATCATTA
ATTGTTAGTAAGTTGAAATGAAGTCTCAAAATGCCGTAAGAGTCAAAATC
TTACAGTGAATAACTGCCTTGTAGAAAATGTTTGCTCCTACAAAACACTT
GGTCACTGTATCTTCTTCTACTTTTTAGCCTTCTCTTGGTGTTAAACCAC
CAGATAGTGCAATGTTGTTCGTCATCACAGGTCCAGTTGGGTCTTATTAC
GACACAGGAAGTTTCCAACCCATCTCACTTTTAGCAGACCCAAGTTTCGT
CAGAGCATGGCCTGGTGGTATTGGAGATTGCAAAGCTGGAGGGTATATAT
TTCTACATGTGTCCATGATTTGATCAATCTATTGGGAGAATCCTTTTATT
TGTGTGTATTTTGTTGTTAAAATTGTAAGGGAAAATACTGTAGGGAAAAA
GTGAAATTTCTTTGTGGTACCTGTGTTGAAAATTATTTATTCTTGTCGTC
ATCCATAATTAAGATTTTATTCTCTTTAGAAACTACGGCCCAACGATATA
CGCGCAAAAATTGGCTCAAGCAAGGGGCTGCTCTCAATGCTTATGGCTAT
ACAAAGACCAAGTCACTGAAGTTGGAACCATGAATTTCTTCATGTTCTGG
GTCAACGAACAAGGAGGTAAGTCTTAAAAAATGGTTCGAGATTGAAGAGT
TTCATAGATTTTTACCACAACTTAGTTTCGATTGTCTAACACTCACGTTT
GATAATATATACTATCAAAATGGCATTTCTTTCTTCCAAATTGCATAACT
TGTGACCTATATTAATCACTGTTATGATTAAATCTCTATGCTGTGGTTAA
GACTTCTATCTTAGTCAGTGAATCTTTTGTAATCGTTTTTAACAGTTTTA
AAAGATATCCCTGTTATTTTTTACCTTCTATAGGTAGAATTGGTATTATG
TAACGTAGCACCCCTGCAGTTCACTTCTCCTACTTCATCTAGGCTTCTTA
TTTCCTCAGTTAGCTGTGCATCAAAATGTGCAAAGGATTTAAGAAAAATT
CCTTCCTCCCTCAGTTGCTACTTCCTTGTTCAATACAATGCTGAATTTCC
TTGTTTGCCTTCGAGATGATTTCGATAATCTGTTATTTTACTTTCAGAAC
AAGAGCTGGTCACGCCACCCCTTAATGGCCTGATTTTACCAGGAATCACG
CGAAAATCACTCCTCGACCTAGCACGAGAATGGGTAAATAACTGAAATTC
CTTTCAAACTCCAAGACCTAATTACGATTACTCAGGGTGATCGTTCGATA
GAAATGTAATGTCATTAGACATCGAATAGCTTCCTTGCGGTATCACTTAC
ATATTTTTCCTTCTATGAATTTTCTCTTGTCGTGGTTAAAGTGAAGTTGC
ATAATGATTGTTTGACTTGCCCACATGGCACATTATCATGATCGATTTAT
CTCATGAATTTTGAAACATGACCTCGTGAATTACAAATCCACTTTTAAAC
ATCCTCTTATTATCTTTCTGTGTTATCTTTTTTTATAAGATCAAGGTTTC
TTCTAATTTCTTGTAACTCACGGTTTTTTAGATGATAAAGCCAAGCTGAC
TGATAATCCCCTAAATACACAAATATCCAAAGTTTCCGCCCCTTTTTGAC
CTTGTAGAGCAGTCTATTTATCCTGAAACTCATAAGATAAGATTTATGTT
TTGTGTTTTGCATAAAATGCCTAATATTCTGCTTTGAAAACGATTTGCTG
TCACTAGAAATGGGAAACTCTCAATGAATATACTATGTAATAAGTGCCTT
TTTATGGAAAAACAAAACAAGCATCATAACTGTGAAACAAAAATAAACAT
TTTAAGAACTTCTCAACAACTATCAGAAAAACTTATTTTGATATAATGTA
ACATACAATTTAAAACACACACACCTCCTTTTGACGTCAATGCAACCTGA
CACTGCAATAATTTGTTTTTTGTTGATTATTGCTTTTCTCGTAATGCAGC
GTCACATTGTCGCATCGGAAAGATAGAAATTGAACTGTTTGACATAAAAC
GATTTTCATCACGCCCCCGTTTTAAAAAAATCCTGAAAAGTCTTTTTTAA
AGCGATTGACATGCAGCTTTATGGAATTTTTAACTGGTGATGTTTTGTCA
GTTTGCATATGATGAGTCATATCAATAGTTTACTGAGAGTTTATACTGTA
GCTTGAAGCCTGAAGACCTTTAGAATGGTAGAATGACAGATTGTTTATAA
TCTTCTTTGGTCCCATATTGATGTTTACGTTTTTACTCTCCTTAGGATGA
ATTCAAAGTCTCCGAAAGGGATTTTACTTTACAAGAGGTCGCCAAGGCTG
CGTCAGAAGGACGAGTATGTATATCTATTTTGTTGACGAATTGCTTTGGT
CAAGTACTCAAAAATAAGCGACCCTTAGGGCCAATTCCTCTACTTTCCGA
CTAACAATATAGGTACTTTCTATGTGAGACACTGTGGATTATGAGGATCA
GGGTCATTTGAAACGACTTTTTCTAAGAGTTAAATTTTATTTATCGTCGA
ATTCTGTGTTTCTTTTTGAGCCTATGTTGTCTATTCAACGTTCTATGTCC
CTTTTGCTATAAACCATTTTAGGGTGGTAGGAAGATTTCGTTTATTTTTG
ATAGCGCTCGTATATGTAATATCCCATAAGTTTTCCCTATTTGAGAAACA
AGAGAAATTAGAATTATTTTTTTATCGTTAGAGAAAAGAAAAACCTCCAC
GCAAGTCAAAAAGGTTTAAAGTGGAAGATTGAAAAGGTAGATTTTACCAG
ATTTTACAAAATCTCTCTTCTATTTTTAGGTGAAAGAAATTTTCGGTGCT
GGCACTGCAGCTGTAGTCAGCCCAGTCGATAAAATTCATTATCTTGATGA
CGTCATCGAAATTGAAAATAACGGATTCCCAATCGCGCAACGTTTCTTTG
ACGAGTTGACGAGCATACAGGTAAGATTGAGTCTTTTTTTTCTTATCGTT
CGAATTTGTTTTTTGAGAGCAGATTGTTTTAGGTTTGTGTTTTTAAGCCA
CAAAGGGCGAATCTCTCGCCCTTAAAGCATTGTTTGCTCCACTTAGAACA
CAAAATTGAGCTTATATAAAGCTCTCATTAAAGGTCTAAATACTTAAAAT
TGCTAATTTTTTGGTGTCCAGGGTTGTCATAGTTTGAAGACGAAAAGAGT
TATGAACCTTAAAAATTGCAGATACGTCAAAGCTTAATTTAGTTATTGTT
AAGTCCTGTTAAATACGAAGTCAGATATAGCATAAATAGCTGAGGCTTAT
CTTATATCAGACTTGCATAAAAATAACGTTATTTTGCACACATGATATCT
CATTTATAATGCTATCACGTGAAAGATCTTCCCAGTAGTTTAACTAAGAT
GATAGTTAGAGACGCTGGGTGAAACTGCTGCAAAAAAGAGGCAAGAATAT
TTTGTGTTATTATTTAGTTAGTCTAGTGTGGTATCGTCAAGTTATATATT
GGACGATGAAAAAAAGGATCTGAGGCCGTCTATGTATATGGTGTTGTTTT
TGTATATTTCTTAAAAATCTAGTTGCTTGTATAAGATGTCTTTTTTATGG
TGTTTTTACAACTGGTGTTTTTTAGTGTGGTATCGTCAAGTCAAAAGATT
TTAAGTTTTTACTTTTTCCCTTGAAGTTTTGACATTTGGTAAGTGATCGA
TGGTTACCATGTGATCGTAGCGAGAGATACATTTAAAAGTCTAGACTATA
ACTATATAGTTGCTATCAGCTTTATTGTGGGGTGAGAAGGCTGTCCTTCA
TTCGTAAAGAAGATATCTTGCTTTGAAATCAACCGAATCAACTGAGCTTC
CATTATGATTAAAAAAAAGTTTTATAGCTTCATCTATTCCTCAGGTATTC
AGACTCGGGCACAGACAGCAGCCATTTTTCCCTTCAGAGCATTTATTTAT
TTTTGAAACCAATCCTATAAAAATCATCAAAAACATGAAATTATAAATAA
GTATTAAAAACATGATAGTACCGATAGCTTCAACTTAGATTTTATAAAGA
AGGTTGCGGATTTTTCTCTTGGTCAAGGCTCTCCAATAAAATCATGGTGA
CTTTGATTTTTCATTTTTCACTTTGCAGTACGGACGAACACCTCATCCAT
GGAATTATCTGGTTGACTCGCAACAACTTCGACAAAAACAACCTAACCTT
CAGTAACAACAACAACCACTTCTAAATACCTTTCCAACCGAAAACAAAAA
AAATACCCTTTTTACCTTTTATCAAAACTTTTATTCCCAAAACAAAGCTT
TCTGTATTACCAAACCTTTTTACAAACTTGAAATATTTTATTTTTAACCT
CTGTATATTATTCTTAATATTTGAAAAACAAAATCTTGTAAGGATAAAAA
TGATATTTAATAAAATCTTTTAAATTTTTTTTTTTAAAGACAAAAACTCA
TTTTGGATAGAGTTTTACAAGAAATTTGGACTGGTTGCATTTCTGAAACA
AAAAATCATAAATTCAGATCTCTTGGTATTTGATACTAACACGTGACGTA
TTTTGACTGATTTTTGAATACATTTTAAATAAAAGGGCGTCCACTGTTTT
CCCATAGTGTAGACGATAAAAAAAGTAACATATTTATTATTTAATCACCA
TCATCATGTATGCATTTTTGTGCTATTTTATTTTATTTATAAAATTATTT
TAAAAAGAAAGAAAAGAATAATAAAAATCTAATTAAATGTGTATGCTGTA
TCAATTAGTGAATTTGAAAAATTGATTGCGGCTAAAAAAGCTTTGAGCAA
AATTAATGGACATAACAGTACTTGCGAAATTTGTAAACAAACTGTATGCA
GCGGATACGAAATCAAAACAAATGTCACATGTCAAAATAAAAAATCAAAC
CAAATATGGCTAATTTTGATTGTTCAATTGTTTTACAAGTTTGTTTTGGA
CACGTGATTTTAATTGTTCTCTTTAATGACACGTGGTTCGCGCAATGTTT
ACATTTTACTACTTTAATGTCCCTTTAAATAGTAATTGTATACTTTTTTT
TATAAGGACGATTAAGGTTAAAAAAAAGATGAGTTTTCGACCAAAGCTGA
GTCTGGAATTTATGAGTTTCAACGAATTCAAGGGTAAAACAAGTAATTAA
GGAAGGAATTTAGCTTCGGGATGAGAACAATCTAAGGCTCAAAGCTTCAA
AAAATGAAAAATCCAAGCCTCGCTGTTCATTTGTATTATTGAGTACATCA
GTCAGCGACTGTTCAGTCAAATAATATCTTGGTTCCTTTGAAGCTGGCTG
ATCTGATTGATTATCATATACACCCTGTCATTAAATGTACATAAAAATTC
TGCATCATCATCATCATCATCATCCATTCCCAAGCTTTTGCATAAGTTAA
ATATCATAACAATTTATCACCAGCCTAGTTCATATCTATTCAGTCTTCTA
TGTTCATCAAGCCAATCTTCCAAAGGTTTAAAGTAAGCAATGATTGGCTT
AGAACTCAACGTCTTTGAACCGGTCAGTACTTTTAAAACGTCTGGCCAAG
GAAGACTTTTACCCAATGATAACATTTCCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014796XLOC_014796Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026347-exon-sc0000569-1575043694:182983..183169TCONS_00026347-exon-sc0000569-1575043694:182983..183169Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1575043694:181981..181994TCONS_00026347-exon-sc0000569-1575043694:181981..181994Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1575043694:181546..181656TCONS_00026347-exon-sc0000569-1575043694:181546..181656Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1575043694:181264..181383TCONS_00026347-exon-sc0000569-1575043694:181264..181383Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1575043694:180928..181091TCONS_00026347-exon-sc0000569-1575043694:180928..181091Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1575043694:180604..180740TCONS_00026347-exon-sc0000569-1575043694:180604..180740Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1575043694:180037..180122TCONS_00026347-exon-sc0000569-1575043694:180037..180122Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1575043694:178906..178974TCONS_00026347-exon-sc0000569-1575043694:178906..178974Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1575043694:178300..178440TCONS_00026347-exon-sc0000569-1575043694:178300..178440Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1575043694:175690..177141TCONS_00026347-exon-sc0000569-1575043694:175690..177141Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1510915933:182983..183169TCONS_00026347-exon-sc0000569-1510915933:182983..183169Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1510915933:181981..181994TCONS_00026347-exon-sc0000569-1510915933:181981..181994Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1510915933:181546..181656TCONS_00026347-exon-sc0000569-1510915933:181546..181656Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1510915933:181264..181383TCONS_00026347-exon-sc0000569-1510915933:181264..181383Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1510915933:180928..181091TCONS_00026347-exon-sc0000569-1510915933:180928..181091Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1510915933:180604..180740TCONS_00026347-exon-sc0000569-1510915933:180604..180740Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1510915933:180037..180122TCONS_00026347-exon-sc0000569-1510915933:180037..180122Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1510915933:178906..178974TCONS_00026347-exon-sc0000569-1510915933:178906..178974Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1510915933:178300..178440TCONS_00026347-exon-sc0000569-1510915933:178300..178440Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1510915933:175690..177141TCONS_00026347-exon-sc0000569-1510915933:175690..177141Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1491911889:182983..183169TCONS_00026347-exon-sc0000569-1491911889:182983..183169Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1491911889:181981..181994TCONS_00026347-exon-sc0000569-1491911889:181981..181994Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1491911889:181546..181656TCONS_00026347-exon-sc0000569-1491911889:181546..181656Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1491911889:181264..181383TCONS_00026347-exon-sc0000569-1491911889:181264..181383Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1491911889:180928..181091TCONS_00026347-exon-sc0000569-1491911889:180928..181091Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1491911889:180604..180740TCONS_00026347-exon-sc0000569-1491911889:180604..180740Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1491911889:180037..180122TCONS_00026347-exon-sc0000569-1491911889:180037..180122Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1491911889:178906..178974TCONS_00026347-exon-sc0000569-1491911889:178906..178974Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1491911889:178300..178440TCONS_00026347-exon-sc0000569-1491911889:178300..178440Clytia hemisphaericaexon
TCONS_00026347-exon-sc0000569-1491911889:175690..177141TCONS_00026347-exon-sc0000569-1491911889:175690..177141Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000569supercontigsc0000569:175690..183169 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.68899	0	3.62673e-10	0
Blast
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BLAST of TCONS_00026347 vs. Swiss-Prot (Human)
Match: BCAT1 (Branched-chain-amino-acid aminotransferase, cytosolic OS=Homo sapiens GN=BCAT1 PE=1 SV=3)

HSP 1 Score: 395.971 bits (1016), Expect = 2.879e-129
Identity = 187/358 (52.23%), Postives = 249/358 (69.55%), Query Frame = 1 
Query:    4 DLKIHQTTTPREKPSADSKLVFGKQMADHMLVAEWTIDNGWDIPSIVPYGPLAIPPSASVLHYGIEVFEGMKAYKCTDGSIQLFRPEENMKRLFASAERLSLPTFDKEEVLKCIAELVRVDQDWIPDCDSSSLYIRPTIISTEPSLGVKPPDSAMLFVITGPVGSYYDTGSFQPISLLADPSFVRAWPGGIGDCKAGGNYGPTIYAQKLAQARGCSQCLWLYKD--QVTEVGTMNFFMFWVNEQGEQELVTPPLNGLILPGITRKSLLDLAREWDEFKVSERDFTLQEVAKAASEGRVKEIFGAGTAAVVSPVDKIHYLDDVIEIEN--NGFPIAQRFFDELTSIQYGRTPHPWNYLV 1065
            DL +   T  +EKP  ++ LVFG    DHML  EW+ + GW+ P I P   L++ P +S LHY +E+FEG+KA++  D  I+LF+P  NM R++ SA R +LP FDKEE+L+CI +LV++DQ+W+P   S+SLYIRPT I TEPSLGVK P  A+LFV+  PVG Y+ +G+F P+SL A+P +VRAW GG GDCK GGNYG +++AQ  A   GC Q LWLY +  Q+TEVGTMN F++W+NE GE+EL TPPL+G+ILPG+TR+ +LDLA +W EFKVSER  T+ ++  A    RV+E+FG+GTA VV PV  I Y  + I I    NG  +A R   +LT IQYGR    W  ++
Sbjct:   29 DLIVTPATILKEKPDPNN-LVFGTVFTDHMLTVEWSSEFGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKPTKALLFVLLSPVGPYFSSGTFNPVSLWANPKYVRAWKGGTGDCKMGGNYGSSLFAQCEAVDNGCQQVLWLYGEDHQITEVGTMNLFLYWINEDGEEELATPPLDGIILPGVTRRCILDLAHQWGEFKVSERYLTMDDLTTALEGNRVREMFGSGTACVVCPVSDILYKGETIHIPTMENGPKLASRILSKLTDIQYGREESDWTIVL 385
The following BLAST results are available for this feature:
BLAST of TCONS_00026347 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BCAT12.879e-12952.23Branched-chain-amino-acid aminotransferase, cytoso... [more]
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