TCONS_00026367 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026367
Unique NameTCONS_00026367
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1118

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026367 ID=TCONS_00026367|Name=TCONS_00026367|organism=Clytia hemisphaerica|type=transcript|length=1118bp
GTTCAGGTCTGAGAAACGGGAACAACAAGGAAGAAGACTtgaaaacaaac
attttctAAAGAGAggaattgtttaaaatttggCCATGTCACCTAAATTG
ATCTTCGTTATCTTGATTTTGATCCAAGCATCATCCAACAATGGAAGGAT
TGTTCGTAACAAGATCATTGAATCACCTAATGGaaccaaaatcaaaatcc
aATACATCGTCATGACCGGATTTAATAACAAGAAGCTCCAAGGGCCAACA
TCTATTCAAACAACCATGGTTAAAAGTGTTAGCCATTGCAAAGCAGAATG
TATCCGGGTTAACAGCTGTATCTCCTTCAATATTTTTCCGGCTGGGTCAT
TTTTTGATTGTCAACTTTTTGACACAGATCATTATATTGACCAGCAAATT
TTAACAGATCAAACGGGATATCAATACTTCGTTATAAAGAGTAATTGCAG
TGTTGGAGATCCAAACCTTAAATGTCCAAATGAATTCACATACTGTAAAC
CAAACTATGATACAGACACCTCCACGTGTGAATGTCGTTTTCCAGGTTGC
TTAGATCCAGTGGTTTATACTTGCACACCAGGTCCAACCATAAATGATAC
AGATGgAGGATGGTTATTAATAGGGAATATAACACTGAACGATCAAAATC
AAATCGGGTCAGTCTATGACACGTACATTGCCAATCCACCATCTCTCCAT
CAAATACAACCAACCCAAAATGAACAATTCCTACTTAACCACAACAAtgt
tcaaagtctttttcaaaGTCATGGATACAGTGAAGTACGAGTGAAATGCT
TCAAACCCTGGCATGGTAGAACGCTTGATGCTGTGTTGTACGGAACCAAA
ACATACCAGTTTATCAATAGAGAACAAAATGTGATTACAGGAATGTGTGG
AAATGTacgatttttggaaaatgatAATTCATTGATTTCAAGTAAACCTT
GTGAGCAACAAATTACTGGTACCGACTGGGAAGAAATACATCCTGGAATT
CTCTATTATGATCATACACTTAGGTCATAGATACAGCACATGTTATATTA
CATTATGAAAGATTCGAATGTGACGATTGGAACCCACAAGCGAATTATCA
GTCCAAAGGAAACTGGCA
Run BLAST on NCBI

protein sequence of TCONS_00026367-protein

>TCONS_00026367-protein ID=TCONS_00026367-protein|Name=TCONS_00026367-protein|organism=Clytia hemisphaerica|type=polypeptide|length=314bp
MSPKLIFVILILIQASSNNGRIVRNKIIESPNGTKIKIQYIVMTGFNNKK
LQGPTSIQTTMVKSVSHCKAECIRVNSCISFNIFPAGSFFDCQLFDTDHY
IDQQILTDQTGYQYFVIKSNCSVGDPNLKCPNEFTYCKPNYDTDTSTCEC
RFPGCLDPVVYTCTPGPTINDTDGGWLLIGNITLNDQNQIGSVYDTYIAN
PPSLHQIQPTQNEQFLLNHNNVQSLFQSHGYSEVRVKCFKPWHGRTLDAV
LYGTKTYQFINREQNVITGMCGNVRFLENDNSLISSKPCEQQITGTDWEE
IHPGILYYDHTLRS
Run BLAST on NCBI

transcript from alignment at sc0000570:252..10608+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026367 ID=TCONS_00026367|Name=TCONS_00026367|organism=Clytia hemisphaerica|type=transcript|length=10357bp|location=Sequence derived from alignment at sc0000570:252..10608+ (Clytia hemisphaerica)
GTTCAGGTCTGAGAAACGGGAACAACAAGGAAGAAGACTtgaaaacaaac
attttctAAAGAGAggaattgtttaaaatttggtGAGTACAATATAtatt
ttcgaccgtagtcgcgcgggcatttttttgtccactttatcACACTAGaa
ccgtcccaatccttttttgacgcattcgtctattgtctataggtgcgaaa
aaaggactgggacggttaaaacgtcaaaaaatgtaTCGCCCTGGGAACAA
GGTTCTTTTAAATCAAGGTCTTTACTTTCTAGcctaattacacccctgtc
ccaatgccccggtagaactttctccctcagtggggatgaaaatttctatc
aaaatgccaatggggatagaaaatctattgtttccagctcgaaaattcca
gtggggatggttttggagtgcaattttttacattcagttttcaatttggg
ataaaatcatagagcaatttcgcagtggggttgaaatgtTAGAATATtct
ttccaccggggacgattttttggcctattttcctaccggggtgggggtcc
accgggtctgtgacacagggatgtcCAGTTGATATAAAAAGAGTTAGAAA
TCTTtattcataaaataaaataaaacgtgGTCTATTTCCATTGGTGGTTG
AGAAAGGGTacagaaaatcaattttaattaaAGTCCAAAACTTACACTTC
GGCCAATTTCTttgtctgttgtcattgtcttttctcattagAGATTTtac
aaaccgaccgctgcgatggagtgttggtgagagaggggagacgatgagag
aagtgttgctatatatataaatcatacttcatcgcagagctctctgtacg
ggaatttttttatcaaacagacaatgcacaCAGAGTGTACTCTGAGGCGA
TAAACGTTAGATaaactctggtacagagtaccaTATTCCGAGATATTAAA
TGAACCAGCAATTGGTTTTTAGAGGTGCCAAAGCCTTTGATTACAAGTTT
CATTCTTTTaactttagcaaaaaaattgtagatttttgCCATTGCAAGAC
TTGCAAGCATCTGTAGAAACTTCATTACTAACGGAGCGCAAGAATGCTTC
CAAGTTTGCTGAAATTACACAATTCTTTATAAGCTATCAGATgccgaggt
agtgaattgtgtcacttcgtagggcaccccttagatcagggcaaattttt
gatattatgctcctaatagggtgtagaattgacaaaagaaaattgccttt
cgaatctcctgcagttttcgagtgaatcgatttttagttaatcgatagaa
cttgtCAAGGGTAAccgaaaatggtatggtttgttaactttcgatgtccA
AATCTCGAGagattttggtttaaatattgaaaattatcgatattttttgc
tgagtcagcagtttttcagcatatttacccaccttaaaaatgaattatct
cgagatttAGACATAGAAAGTTAACAAAtgataccatttttggatactac
taattcagggctattcagccgtgggaatgattttttctgaaaatgctcct
aggaaaatgctgacgtcatcggaaaacgcccaaaacgtcgatttttcgcc
ttaaaaatgtcatttctcggcaccaggtggtcgaaacttaaaaaataacc
ccattttctttatctacttttcacgttGAATCAGTTGGTAGCATCaggta
tttgattttcagactccGAAAataccgttagtaaaggggggacccttgac
aagttctatcgattaactaaaaatcgattcactcgaaaactgcaggagat
tcgaagggcaaatttttttgtcaattctacaccctattaggagcataata
tcaaaaatttgccctgatctaaggggtgccctacgaaaaccatctttaag
gccttttctgaacCTCGGACGCTGGCCTATAAAAAATGTATACTGGTCAA
GCTAACACACTGCTGCTAGCTTCGAAAAAAAAGACCACCCCCTCACTTAG
ATCATATTTCAAATTCTTGATCCATTTTCTAAGATTgatattaatttatt
ttttacaggCCATGTCACCTAAATTGATCTTCGTTATCTTGATTTTGATC
CAAGCATCATCCAACAATGGAAGGATTGTTCGTAACAAGATCATTGAATC
ACCTAATGGaaccaaaatcaaaatccaATACATCGTCATGACCGGATTTA
ATAACAAGAAGCTCCAAGGGCCAACATCTATTCAAACAACCATGGTTAAA
AGTGTTAGCCATTGCAAAGCAGAATGTATCCGGGTTAACAGCTGTATCTC
CTTCAATATTTTTCCGGCTGGGTCATTTTTTGATTGTCAACTTTTTGACA
CAGATCATTATATTGACCAGCAAATTTTAACAGATCAAACGGGATATCAA
TACTTCGTTATAAAGGTATTATCCTAAGTATTAAAGTATGAATTCCTAAA
GAATACCGAAATTGGACACATAATCCCTCTCCCTTGTATATCATTTTTCC
CCGATACTATATcactttttatttgacgtcagttagtcaacacgcatttt
gtgcagttcttcaaaaatggttgaaatttagcaaaatcaaaaacatgaac
gaaaaaaccgacaaaaagcaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNAAAAATGAATTCCAAAGATGAcgatttcgtttgg
catgtaagaggaagccctagaacaaaccttcgcctagttcgaaaacctag
gacaaagaccaaaacaacgtcttctcttcTGTCCATNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTcacgactggacgac
agatgaagaattagacaatttataaatctaaaattatttcgtagaggtcg
atagacctgtgaaatataattctatgaataaaaaaaaataaaatagaagg
tttttaaagaaaaagaaattcaaaaaactttcagcaaaattaatattttg
taTGGAAGCTATAATGGGAAGCTTTTGTtggaccatgttcgcacgtgacg
gttccgtttcgctccgaaacgaaatgaagccttTCTATTGGTTGTattca
agtgttacgtcacttctaacccatagaatggcttcattccgtGTGGAAAC
TAAAAGAAGGAGCTTTTCTTTAAGAATATGAAATTTTTCGaagattgaaa
gaaattttcaatgtgaaaaagcttgtgaattaaaattgatgagtaagcaa
acgatatcacttttattaaaaaacaaaacctttaagttatTTTTCTAAGA
AGAACAAGAAGAGTCGATTTCCCAGGATCTCAACTTAAGTCTGTTTCCGT
TTATATTTCCAAGACAAACTCCTGCCGTACAGAATCAAAAACCAGAGTTA
TTTTGTGATTTATTTCAGAGTAATTGCAGTGTTGGAGATCCAAACCTTAA
ATGTCCAAATGAATTCACATACTGTAAACCAAACTATGATACAGACACCT
CCACGTGTGAATGTCGTTTTCCAGGTTGCTTAGATCCAGTGGTTTATACT
TGCACACCAGGTCCAACCATAAATGATACAGATGGTAAGTACAATgatgg
tcgaaatctattgagaattaagcttatttcctcgtttttcgaaatttgga
gttcgggcgagaaagtcgagtttgggccatctcttaaatttaatcgCATA
TTTCAATTTGTCTCGGGTTTATatacttccaggctatattatgagcctta
ttggaccatttttgaacttttggatcctcagatcctaaggtccacTACCC
TTGGAAAGGGGTAGGAGCATTGAAGTATAAGCCTTTTGAGCTAGAATTCT
AAAttctagccattcgggcttaTACTTTAATGCTCCACGGGTAGTGGTGA
CACATTTAAGCTAGAGAAAAATTGCTTCAAATCTGCAACTGCTGCTAAAA
ACTGGGGTGCAAATTAACTTGAAATGTTATTGTTTTgagctaaagtctgt
ctcgaaataatttgcagctggagaaaaaaatggctgtaacctttgataga
attcgaatcaagttgcgattttgtgctcgttaaaaagatNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGGAGGGTTAAGcggcgg
atgaaaaataatgcctagggtctgaagtttgtcgaacaaagattgtcttg
catgggaatatatagagcagtgcagaagaaagtgttttagtgttttcaac
agagttagttcggcaaccacagaaagggtctaaatGATTGTTTTTAGTCA
GCAttctatttttattacattATGTAATGAATTTAATGAGTACATAGAAG
GGAAACAATCGCCGTTTAGTAGTGTCAACTGTGCATGCGTCCAAACAagt
ttccattgttttgattttagcgaccgcTCTTtcccgtaaaaaaacggtag
gtaaaattCCGGTTCTCGTAAGGAAACCTAGCTACCTAACCATAACTTCc
tttcctctagatgaatttttgtgaaatttttaggAGAGAtctataaaatt
atcattgatatcatgttcaaatatctaaaccattctctttaaaggaaaga
aaaaaattgacaatgtttacattcctctaaccttccacagtactaaagtc
cGCATTTTTACCTACGGTTTTTACGGTAGAACACGctcgagactcctaaa
cggtgtattataATATTTACACAtccaaattaaattttaaggcttgaagT
GTCCAGAGTTATTATATCAGCATATAGGATTAATGGTTGATCTAATACTA
AAAAGTTGATATATTTATTTAAGCTGAATACACTGACATTGcgagaagat
ttttaaaaatatgaaaaatcgtACGTGGTGCTAGGGGGGGGGTACATGCA
AAACCGACCTTAGTGGTCATAGCTTGAAGGTAAAGCAttcagctacggtg
cgcaaagTCGTGGGTTCAATCCTTGGCCAGATCATACCAAAGACTCAAAA
AATgttacttgatgcctctcttcTATTTGATGATAAGCAATCAAGAGAAG
GGTAAAGGTAagggagcaatccagggagaaagagtggcgccctctccTAC
CTTCGGCGGGTAGATAACTATCGAAAAAGGAGCCTCGACACCCCGACTGC
TGTCACAGACTTACTTTAGACCGACCTTAATCCCTTAATCCCttattttt
ttctaacttttcaGCATACGAACTGAGTTCAGGGATAACGGAAATTGGCA
CAACATCATCTGGCTGTCCTCAATACACACTCAAATTCAAATTTATGATG
ACCGCCATATATAGTTCTGCGTATAGCAAAGTTCTTTCTGTGGTTGATGC
AGGTAGTAATAGCGAATGGATCAGTTTCCGTGTAGATCGGAGTCTTAGGA
GTCTTTTAACGGGTCTTCGTGGTGTGGGTGGTAGCCAGACCATTGTTGAG
CCTTACCAAGCTAATGTCGAATATGTTATCATAGTTACATCATATAAGGA
AGCTGATGGTGTGGTATTATAGAGTTACGTCGAATGGTAATGAGAAGTTG
GCCAGGACACATACCAGGAAGACTGGAGCAGCAGCtgaaatgaaaatcaa
agtTGGCCGATGTGGGGCTTGTGTAGTTAGTGATtttgaatatatatttt
aaattttgatacagtggagtctctataactcgaacattCACGCAAATTTA
TTAGAGATCAGAAAAAATTTGAGAGTTGTGGAGTAAGGTATTGTTATTTG
aaaggacgagaaaacttgtcgGAGTTAAGGAAACATTCTACTTATAGATA
TTCGAATTATGGGGAGTCTACTGTGTTCGATCTGGATGCATTTTAACAGG
CCGAGGATGAGTTTTCTCTTTCAACAAACTTTGCTGATATTGTCATACAA
TcaactttctataattcgaaaccTCTATTACTGGAATCTTTCTGCAACTC
GACCTAAAATATTAGTCCCCTCAGGTAATGAGGGGTATAAATTACTTTCT
GTAATTTAAGTCCTTTTCTAATTCGAAGAGAACTTTTtatcccttgaaga
tcgaattagagagtaaTTATCTTGGTATGGGTGGGTCAAGGGTCATCTTT
AAATTGGTCCGGGATAAAAAGGcccaaaattttggattttctcaGCAAAA
AGTAGCTTTAATGTTTGTCCGTTTTACTAAAATCGGATTAAATCGAtcga
aaaaaatcgcgaaattttctggattatccgccaaaaatgcgattttaaaa
atttcgctgtggatttaatttcgcgagtcagaaaCCTCATGTgttttcgc
gaaagttaatccgattaagTATCATCAGAAGGAATAATAATTAAAATTTC
CCAAACTTTAAATAACATTTCTGAGTTGATAACTTATAATCTATTGACTT
TTTAGACCTAGCCTgttggaggttctataaattaaccgttcgttcgttcg
ttcgtttgaatgaaagtagggtaccatcattggtaaaagatggttgaagc
aggttttaacaaaaaaaatttcgcctCGAAAATTGAATCTTTAATCAtat
agccaaattactcaattttttgatttttgattagattgttgtttttttgc
acaTGAAGGATTAGTTTTGAAGAACGTtagtgtttagacatgaaattttg
gctgcttGAAGAGTTTTTTAGAGAAattggccaaattcgatattttttta
taagcgcATTTCCAATTAATTAGTTATTCGCTTGTCTCGCGAttagctct
ttcattctttatgatttttttgcacaaaggtgcctAAATGTAAAcactcg
aatgtgacggagcccaatttcgAGAAAAAGTTTTGGGAGGCAAGTTGCAG
ccaaaaaaaggctaaaaaagggttttttggactttgttgaaAACTGGATT
AttaatttttcctgattttttgcatgaaagtagggtaccatcatcgATAA
ATGATGGTTGAAGCAGATTTTCACGAAAATGTTTTCTTGCCTCAATAATT
GAATCTTTATCCAtaaaaatcactatttataagcatgcATTAatgttttt
agtcaaattactcaattttttgatgagatagatatttcttttcctttcaA
TCTCCTCTCTTAAAACCACCCCAATGGACACAGAgacaatcaatgataaa
aacaaaggacgaattttaataaatcgtcactatttgtgttctgaatgatt
gttttacCGTCACACTCAAGTAGATATTATCAATTATATATAAATTTGCG
ACCGTCGTGACCGCAAGGTTATGCCACCATCCTATGTGGATTTGTGATAC
TTTTCAGATTTGTTTACCTcttattattcgtttttttAACTAATTTATTC
TAATAACATTtatattgattttaatgtttatCTCTTGGTCCAAATATATT
Gtatttaaaagtcaaagaaaaaatatatatttgttaaatgcatataacca
ggtactcttaggtgccaaatcccggggggggggcagctgggcaaaaggac
cgacgggtatgtgcgggtcctaagggtgcCTTTTCCAACTGTAAGGGTCG
ggaaaactagagatgcactgtaagggtagaaatttttaaaatgggGATAA
AATTAGAGTCGATTTCCCAGTTGGGCTTCTAATTGTAGGATTTTTTCTCA
CCTGCATGGTTCGAACTTTTAGTCAAGTTTTCCATTGGAGTCTGTTATGC
ATGGTTGTCTATGTACAAGCTTTTTTTACGAGAACAAgtgttttaagcct
aaaatgttcttaacatgttcttatttttaccattttttgagtatttttgc
ctattttcttaagaaatggGGTGTTTTAAGGTCTGCTAATCTTTAAAata
ttgttcttaacattttggccatcaaagtgttatgttcttatattagtttg
ttcttttaaaaaataatcgtgttttcattcaaaatcgAGTCATCGAAATG
TCCTTGGAAATAAAAATGtgcattttttcatttttatcaaacaggAGGAT
GGTTATTAATAGGGAATATAACACTGAACGATCAAAATCAAATCGGGTCA
GTCTATGACACGTACATTGCCAATCCACCATCTCTCCATCAAATACAACC
AACCCAAAATGAACAATTCCTACTTAACCACAACAAtgttcaaagtcttt
ttcaaaGTCATGGATACAGTGAAGTACGAGTGAAATGCTTCAAACCCTGG
CATGGTAGAACGCTTGATGCTGTGTTGTACGGAACCAAAACATACCAGTT
TATCAATAGAGAACAAAATGTGATTACAGGAATGTGTGGAAATGTacgat
ttttggaaaatgatAATTCATTGATTTCAAGTAAACCTTGTGAGCAACAA
ATTACTGGTACCGACTGGGAAGAAATACATCCTGGAATTCTCTATTATGA
TCATACACTTAGGTCATAGATACAGCACATGTTATATTACATTATGAAAG
ATTCGAATGTGACGATTGGAACCCACAAGCGAATTATCAGTCCAAAGGAA
ACTGGCA

Coding sequence (CDS) from alignment at sc0000570:252..10608+

>TCONS_00026367 ID=TCONS_00026367|Name=TCONS_00026367|organism=Clytia hemisphaerica|type=CDS|length=2835bp|location=Sequence derived from alignment at sc0000570:252..10608+ (Clytia hemisphaerica)
ATGTCACCTAAATTGATCTTCGTTATCTTGATTTTGATCCAAGCATCATC
CAACAATGGAAGGATTGTTCGTAACAAGATCATTGAATCACCTAATGGaa
ccaaaatcaaaatccaATACATCGTCATGACCGGATTTAATAACAAGAAG
CTCCAAGGGCCAACATCTATTCAAACAACCATGGTTAAAAGTGTTAGCCA
TTGCAAAGCAGAATGTATCCGGGTTAACAGCTGTATCTCCTTCAATATTT
TTCCGGCTGGGTCATTTTTTGATTGTCAACTTTTTGACACAGATCATTAT
ATTGACCAGCAAATTTTAACAGATCAAACGGGATATCAATACTTCGTTAT
AAAGAGTAATTGCAGTGTTGGAGATCCAAACCTTAAATGTCCAAATGAAT
TCACATACTGTAAACCAAACTATGATACAGACACCTCCACGTGTGAATGT
CGTTTTCCAGGTTGCTTAGATCCAGTGGTTTATACTTGCACACCAGGTCC
AACCATAAATGATACAGATGgAGGATGGTTATTAATAGGGAATATAACAC
TGAACGATCAAAATCAAATCGGGTCAGTCTATGACACGTACATTGCCAAT
CCACCATCTCTCCATCAAATACAACCAACCCAAAATGAACAATTCCTACT
TAACCACAACAAtgttcaaagtctttttcaaaGTCATGGATACAGTGAAG
TACGAGTGAAATGCTTCAAACCCTGGCATGGTAGAACGCTTGATGCTGTG
TTGTACGGAACCAAAACATACCAGTTTATCAATAGAGAACAAAATGTGAT
TACAGGAATGTGTGGAAATGTacgatttttggaaaatgatAATTCATTGA
TTTCAAGTAAACCTTGTGAGCAACAAATTACTGGTACCGACTGGGAAGAA
ATACATCCTGGAATTCTCTATTATGATCATACACTTAGGTCATAGATGTC
ACCTAAATTGATCTTCGTTATCTTGATTTTGATCCAAGCATCATCCAACA
ATGGAAGGATTGTTCGTAACAAGATCATTGAATCACCTAATGGaaccaaa
atcaaaatccaATACATCGTCATGACCGGATTTAATAACAAGAAGCTCCA
AGGGCCAACATCTATTCAAACAACCATGGTTAAAAGTGTTAGCCATTGCA
AAGCAGAATGTATCCGGGTTAACAGCTGTATCTCCTTCAATATTTTTCCG
GCTGGGTCATTTTTTGATTGTCAACTTTTTGACACAGATCATTATATTGA
CCAGCAAATTTTAACAGATCAAACGGGATATCAATACTTCGTTATAAAGA
GTAATTGCAGTGTTGGAGATCCAAACCTTAAATGTCCAAATGAATTCACA
TACTGTAAACCAAACTATGATACAGACACCTCCACGTGTGAATGTCGTTT
TCCAGGTTGCTTAGATCCAGTGGTTTATACTTGCACACCAGGTCCAACCA
TAAATGATACAGATGgAGGATGGTTATTAATAGGGAATATAACACTGAAC
GATCAAAATCAAATCGGGTCAGTCTATGACACGTACATTGCCAATCCACC
ATCTCTCCATCAAATACAACCAACCCAAAATGAACAATTCCTACTTAACC
ACAACAAtgttcaaagtctttttcaaaGTCATGGATACAGTGAAGTACGA
GTGAAATGCTTCAAACCCTGGCATGGTAGAACGCTTGATGCTGTGTTGTA
CGGAACCAAAACATACCAGTTTATCAATAGAGAACAAAATGTGATTACAG
GAATGTGTGGAAATGTacgatttttggaaaatgatAATTCATTGATTTCA
AGTAAACCTTGTGAGCAACAAATTACTGGTACCGACTGGGAAGAAATACA
TCCTGGAATTCTCTATTATGATCATACACTTAGGTCATAGATGTCACCTA
AATTGATCTTCGTTATCTTGATTTTGATCCAAGCATCATCCAACAATGGA
AGGATTGTTCGTAACAAGATCATTGAATCACCTAATGGaaccaaaatcaa
aatccaATACATCGTCATGACCGGATTTAATAACAAGAAGCTCCAAGGGC
CAACATCTATTCAAACAACCATGGTTAAAAGTGTTAGCCATTGCAAAGCA
GAATGTATCCGGGTTAACAGCTGTATCTCCTTCAATATTTTTCCGGCTGG
GTCATTTTTTGATTGTCAACTTTTTGACACAGATCATTATATTGACCAGC
AAATTTTAACAGATCAAACGGGATATCAATACTTCGTTATAAAGAGTAAT
TGCAGTGTTGGAGATCCAAACCTTAAATGTCCAAATGAATTCACATACTG
TAAACCAAACTATGATACAGACACCTCCACGTGTGAATGTCGTTTTCCAG
GTTGCTTAGATCCAGTGGTTTATACTTGCACACCAGGTCCAACCATAAAT
GATACAGATGgAGGATGGTTATTAATAGGGAATATAACACTGAACGATCA
AAATCAAATCGGGTCAGTCTATGACACGTACATTGCCAATCCACCATCTC
TCCATCAAATACAACCAACCCAAAATGAACAATTCCTACTTAACCACAAC
AAtgttcaaagtctttttcaaaGTCATGGATACAGTGAAGTACGAGTGAA
ATGCTTCAAACCCTGGCATGGTAGAACGCTTGATGCTGTGTTGTACGGAA
CCAAAACATACCAGTTTATCAATAGAGAACAAAATGTGATTACAGGAATG
TGTGGAAATGTacgatttttggaaaatgatAATTCATTGATTTCAAGTAA
ACCTTGTGAGCAACAAATTACTGGTACCGACTGGGAAGAAATACATCCTG
GAATTCTCTATTATGATCATACACTTAGGTCATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014805XLOC_014805Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026367-proteinTCONS_00026367-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026367-exon-sc0000570-1491911889:252..333TCONS_00026367-exon-sc0000570-1491911889:252..333Clytia hemisphaericaexon
TCONS_00026367-exon-sc0000570-1510915933:252..333TCONS_00026367-exon-sc0000570-1510915933:252..333Clytia hemisphaericaexon
TCONS_00026367-exon-sc0000570-1575043694:252..333TCONS_00026367-exon-sc0000570-1575043694:252..333Clytia hemisphaericaexon
TCONS_00026367-exon-sc0000570-1491911889:2310..2666TCONS_00026367-exon-sc0000570-1491911889:2310..2666Clytia hemisphaericaexon
TCONS_00026367-exon-sc0000570-1510915933:2310..2666TCONS_00026367-exon-sc0000570-1510915933:2310..2666Clytia hemisphaericaexon
TCONS_00026367-exon-sc0000570-1575043694:2310..2666TCONS_00026367-exon-sc0000570-1575043694:2310..2666Clytia hemisphaericaexon
TCONS_00026367-exon-sc0000570-1491911889:4470..4635TCONS_00026367-exon-sc0000570-1491911889:4470..4635Clytia hemisphaericaexon
TCONS_00026367-exon-sc0000570-1510915933:4470..4635TCONS_00026367-exon-sc0000570-1510915933:4470..4635Clytia hemisphaericaexon
TCONS_00026367-exon-sc0000570-1575043694:4470..4635TCONS_00026367-exon-sc0000570-1575043694:4470..4635Clytia hemisphaericaexon
TCONS_00026367-exon-sc0000570-1491911889:10096..10608TCONS_00026367-exon-sc0000570-1491911889:10096..10608Clytia hemisphaericaexon
TCONS_00026367-exon-sc0000570-1510915933:10096..10608TCONS_00026367-exon-sc0000570-1510915933:10096..10608Clytia hemisphaericaexon
TCONS_00026367-exon-sc0000570-1575043694:10096..10608TCONS_00026367-exon-sc0000570-1575043694:10096..10608Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000570supercontigsc0000570:252..10608 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0579438	0.101361	0	0	0	0	0	0	0	0	0	0.048418	0.81419	1.07888	0.673759	0.601302	0	0	1.59635	1.61612	0	0	0.353422	0.320008	0.0518029	0.483567	0	0	0	0.0115297
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003609Pan_app
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026367 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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