TCONS_00026478 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026478
Unique NameTCONS_00026478
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length137

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026478 ID=TCONS_00026478|Name=TCONS_00026478|organism=Clytia hemisphaerica|type=transcript|length=137bp
atttaatgaaagcTAAAGAAAAGTTCCAGAAATCTTCAGACCAATATTTG
ACAGTGGATCGTCAACAATCGTCAAGTAGTACCAAGTCTCAtgaagaaag
tgaaagtgaaagtgacgATGAAGTCTTTTCTGAAGAC
Run BLAST on NCBI

transcript from alignment at sc0000573:173745..174310-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026478 ID=TCONS_00026478|Name=TCONS_00026478|organism=Clytia hemisphaerica|type=transcript|length=566bp|location=Sequence derived from alignment at sc0000573:173745..174310- (Clytia hemisphaerica)
ATTTAATGAAAGCTAAAGAAAAGTTCCAGGTATTTTCATTGTCTTTTTCT
TTGTTCTCTGGGGACAACAAAAGATTTTCTATATCTTCTAAACTGCAATC
TTATTCAAACCCCAGTCACGTTCTTTCTTGTTTCCGTTGCCAACAATACC
GATGCAGGCTTTGGTGAAGAAAACTGTTAGATGTTTGATTCGAAACCATC
ATCAGTTAATATTCTAAGCGATGATTACTGAACTGTCTTAAAAGATGTCT
TCACTAGGCTGTGGAAACTCAAAAACTGGAATTAAGAAATCTAAGGTTCA
AAAGATGTTACGGTATCTAATTTGGAAGTCCAAGTAAGAAACTTCAAAAG
GAAGACACGTATAATTATCTAATGCTCACCACGGTCTAATAGAGCAATAT
GGTTTTAGTGCTCAACTAAAAAACTAATCAACTCTAATAATAACTTTTTC
ATTGATAGAAATCTTCAGACCAATATTTGACAGTGGATCGTCAACAATCG
TCAAGTAGTACCAAGTCTCATGAAGAAAGTGAAAGTGAAAGTGACGATGA
AGTCTTTTCTGAAGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_014881XLOC_014881Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026478-exon-sc0000573-1575043694:174282..174310TCONS_00026478-exon-sc0000573-1575043694:174282..174310Clytia hemisphaericaexon
TCONS_00026478-exon-sc0000573-1575043694:173745..173852TCONS_00026478-exon-sc0000573-1575043694:173745..173852Clytia hemisphaericaexon
TCONS_00026478-exon-sc0000573-1510915933:174282..174310TCONS_00026478-exon-sc0000573-1510915933:174282..174310Clytia hemisphaericaexon
TCONS_00026478-exon-sc0000573-1510915933:173745..173852TCONS_00026478-exon-sc0000573-1510915933:173745..173852Clytia hemisphaericaexon
TCONS_00026478-exon-sc0000573-1491911889:174282..174310TCONS_00026478-exon-sc0000573-1491911889:174282..174310Clytia hemisphaericaexon
TCONS_00026478-exon-sc0000573-1491911889:173745..173852TCONS_00026478-exon-sc0000573-1491911889:173745..173852Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000573supercontigsc0000573:173745..174310 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026478 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top