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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026572 ID=TCONS_00026572|Name=TCONS_00026572|organism=Clytia hemisphaerica|type=transcript|length=1224bp
CGAACGTTAAATCAATGATTATCATGTTTTTCGTTTTAATCGTTCAATCA
ATGGTTTTAGTTGATTTAATGATCAANGAAATGCACAACATAGTATCGAA
CGTTAAATCAATGATTATCATGTTTTTCGTTTTAATCGTTCAATCAATGG
TTTTAGTTGATTTAATGATCAATACTACGGAACTATGATAATACCGCTAT
ACGGTTAAAAAGAAACCCGGGTATCTAACCCAAGGACACAAAGGTAAAGC
AAAAAGAACAGATGATAGTTCAACATATTATTACTTATTTATGGCAGAAA
ATAATGATGGTGAGCAGCAGTGTTCCTCACAGCCATCACAGTCAAAGTGA
CCAAGAAAGACAAGTAAGTAGTTTCTTCTTTgtgttcaacattttcattt
gcCACATTTTGTGAAAATGAGGCGGCGAGTGGTggaaaaacaagtttttg
tgATTGTTTTTGTGATTTGTTTTTTAACGCCCAGTCcagtcagcaccttg
aactgactacccaattcccttcacatggcatgggttgacgaAGGTTCAtc
cacttgccaagtgaaccgctgcgagtgggaatcaaacCTCTCAGTCCACA
GGTCCACAGTCCACAGTTGACAGTGCCTAATTTTTATGCATAGTCTATGC
ATTTACAAGCATTTACCACATTTACCACTGAAAGGCATGATAGTAGATTG
TGATCTGATattaccagacggtgtcaatcgaaccacttcgaacaaaaatc
gcaatcaaaccaatcgaacgtaatcgaacgtgaTCGAATAATTTGCGATT
CGAttatagttgactatgttccattggttcgattacaatagacctttttt
taaagaggccaccctgttgaataattatgtagtccagcagaaaaacaatg
ataaaaccatgcataatcaataattattacaatatgcatgatacagtaac
tatgcatggctctatcattgtttttatggctggactacataattattcaa
caggacgtcctctttttgaaaaaaggtctattatgttcgctgagtttgat
tgcgattaaattaaattggatcactctgttactgtagagctttttagcgt
gggcggccgagcgcttatcAAGTATCACATGAAAGCGATCGAACGTACTc
caacataatcgaatacaatcgaacgtaatcgaagcaatcgaacggcaaat
cctgggtaatattcgattgcgatt Run BLAST on NCBI transcript from alignment at sc0000575:213597..215019+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026572 ID=TCONS_00026572|Name=TCONS_00026572|organism=Clytia hemisphaerica|type=transcript|length=1423bp|location=Sequence derived from alignment at sc0000575:213597..215019+ (Clytia hemisphaerica)
CGAACGTTAAATCAATGATTATCATGTTTTTCGTTTTAATCGTTCAATCA
ATGGTTTTAGTTGATTTAATGATCAANGAAATGCACAACATAGTATCGAA
CGTTAAATCAATGATTATCATGTTTTTCGTTTTAATCGTTCAATCAATGG
TTTTAGTTGATTTAATGATCAATACTACGGAACTATGATAATACCGCTAT
ACGGTTAAAAAGAAACCCGGGTATCTAACCCAAGGACACAAAGGTAAAGC
AAAAAGTATACAGTAATTATTATACCGTCAGTACAACTTTTTATCTTGTT
TGCTGGATGAAATAAAATCAAGATAACAAAGTTTTATCCATTGTTGCACG
GTTGCACAACTCGAAAAGCTTTGCTTTGTTGTCTTGATTTGAACTTTCTA
TCTAAAATTAAAATGGCTActttcaaattgaatttcttttaaacATACAG
ACAGGAACAGATGATAGTTCAACATATTATTACTTATTTATGGCAGAAAA
TAATGATGGTGAGCAGCAGTGTTCCTCACAGCCATCACAGTCAAAGTGAC
CAAGAAAGACAAGTAAGTAGTTTCTTCTTTgtgttcaacattttcatttg
cCACATTTTGTGAAAATGAGGCGGCGAGTGGTggaaaaacaagtttttgt
gATTGTTTTTGTGATTTGTTTTTTAACGCCCAGTCcagtcagcaccttga
actgactacccaattcccttcacatggcatgggttgacgaAGGTTCAtcc
acttgccaagtgaaccgctgcgagtgggaatcaaacCTCTCAGTCCACAG
GTCCACAGTCCACAGTTGACAGTGCCTAATTTTTATGCATAGTCTATGCA
TTTACAAGCATTTACCACATTTACCACTGAAAGGCATGATAGTAGATTGT
GATCTGATattaccagacggtgtcaatcgaaccacttcgaacaaaaatcg
caatcaaaccaatcgaacgtaatcgaacgtgaTCGAATAATTTGCGATTC
GAttatagttgactatgttccattggttcgattacaatagaccttttttt
aaagaggccaccctgttgaataattatgtagtccagcagaaaaacaatga
taaaaccatgcataatcaataattattacaatatgcatgatacagtaact
atgcatggctctatcattgtttttatggctggactacataattattcaac
aggacgtcctctttttgaaaaaaggtctattatgttcgctgagtttgatt
gcgattaaattaaattggatcactctgttactgtagagctttttagcgtg
ggcggccgagcgcttatcAAGTATCACATGAAAGCGATCGAACGTACTcc
aacataatcgaatacaatcgaacgtaatcgaagcaatcgaacggcaaatc
ctgggtaatattcgattgcgatt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026572-exon-sc0000575-1491911889:213597..213851 | TCONS_00026572-exon-sc0000575-1491911889:213597..213851 | Clytia hemisphaerica | exon |
| TCONS_00026572-exon-sc0000575-1510915933:213597..213851 | TCONS_00026572-exon-sc0000575-1510915933:213597..213851 | Clytia hemisphaerica | exon |
| TCONS_00026572-exon-sc0000575-1575043694:213597..213851 | TCONS_00026572-exon-sc0000575-1575043694:213597..213851 | Clytia hemisphaerica | exon |
| TCONS_00026572-exon-sc0000575-1491911889:214051..215019 | TCONS_00026572-exon-sc0000575-1491911889:214051..215019 | Clytia hemisphaerica | exon |
| TCONS_00026572-exon-sc0000575-1510915933:214051..215019 | TCONS_00026572-exon-sc0000575-1510915933:214051..215019 | Clytia hemisphaerica | exon |
| TCONS_00026572-exon-sc0000575-1575043694:214051..215019 | TCONS_00026572-exon-sc0000575-1575043694:214051..215019 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000575 | supercontig | sc0000575:213597..215019 + |
Blast
The following BLAST results are available for this feature:
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