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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026604 ID=TCONS_00026604|Name=TCONS_00026604|organism=Clytia hemisphaerica|type=transcript|length=505bp
CGGAGAAACAGAGAAGGCAATGAAACCCTCAAGTCTAAAAAAAGAGGAAT
TCCATGGCAGTTGCACTTTGGTATGTGGCCAGCAGTTCGTTTAGCAACAC
GTTTCTGATAAAACTGAAGTTATCTTTTTCGgaagaaacaaaaaggttaa
cgAATGCAAAACTCTTCCACCAGTTGTTTTTCAAGACGCTGAAATTGAAT
GCAAAAGTGACGTGAAGTACCTTGGTGTCATATTCGATGAGAATATGTCC
TGGGAAAAACAAGCTAGCAGTGTTCGTAGCAAAGTTTATCTTAGTCTAAA
CAAGATTAGAAGAATATCACATCTAGTTGATGACAGTACTAAAAATCTAC
TAATAAACGCTCTTGTATTTCCGCATCTCAACTACTGCCTTAATTCATGG
AGCAAGGTGTCTGCTGCAGTATTACGAAAGTTTGATTCTCTTTCTCGGCA
GATAAATCAAGTCCACACAATGAATAAAGATTTTCGTCAGCTTTGTGACT
ATTNN Run BLAST on NCBI transcript from alignment at sc0000576:158882..160779+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026604 ID=TCONS_00026604|Name=TCONS_00026604|organism=Clytia hemisphaerica|type=transcript|length=1898bp|location=Sequence derived from alignment at sc0000576:158882..160779+ (Clytia hemisphaerica)
CGGAGAAACAGAGAAGGCAATGAAACCCTCAAGTCTAAAAAAAGAGTAAG
TTTGACCGAACGACTTTGGTCTATAAAGAATGACACAAAAGTATCTATag
gaaaatgttaaataaaaccttaaaacccCTCCAACAACGCACATAGAGAG
GGGTAAGTAAATCCTAGCGTACGAAACGGTTATTGttttaaaagaaattc
ttttatttcttGACTGCGTCTCAGATTTTCTCCAGTCACGCATCCCTCGG
CTCCAGTTCCTTATATAAATTTACTGCGCAAACTCATAGGAAATTAGAAG
AATACATCAAGAAGATGTTAACGGACCTACTGGAAAATCAGAACGAGTAC
GTCACAACTAAAAGACGAAAAGTATACTGGTAAAAAACGAAGCTAATCGC
TGTATGAATAAAAATCGACCTATTACCCTAAAAATACCATCACAAAATGA
CAGCTAGAACCCTTACCAGCATTGCTACAAGAAGAAATAGATGTCGTGAT
TAATAAGACTTTGATGTTCGAttgtaaataaatttaaaacaagaaaaaat
ccCCTACCATCGAAATTATTTCGTCTAACTGATACACGGAAGCAAATAAT
GGCACGTCAAGTGTCATTTGCTCCATGTAAacacgaccctggacaccgcc
gtacattgcgCGGTGGAGTCCGGTGGACGGAGCCTAACCTATTTTTACCA
CCGTACATGTCCCACCGTACACGAAAAATACCCccgtacattgtacggtg
gGAAGTAGATTAGGTTTCTGAATTCCCACCGTACAAGACATGTTATGCCG
CCTTCTTGTATACACCTTAAGGCGGAATAAGGGCGGACTGGGTGCGTGCT
TTCTCTGATTCCCTCTCAACCGCCGAACCatcaaaaactaaaagaaaaac
tcctCGAAACAAAAGCCGAGGGAATGGAAAGTATTTCATAAACTTCGTTC
CCATCGTAACTATCGGCTTTTCGACGTCTACTAATTAGACGCCAGATATT
TTCTGCCCTGTTTTTAGCCCCGATGTTTCCGAAAATATCCCGATCTCtta
aaaaattgggtttgcgtgaTTTGCGAAAGAATTTTGGCGTAAATgtgtga
attttgggtccgcttCTGGGGGCCTCTTTTTGAAAGACTTTTGAGTACCC
TTGTGGCTCGTACATACCCGTCACCTGTTTTGCCTAAAGTATCTCCCCCC
CCCCTCAGTAAAAAAACAAAGCCTGAGGATACACGGGCACGAGGTTGGTA
TTTCATCTAAAGTGACCTATTTTGTGTCGTACCCGAAAAGAATGGTAAAC
TGAAATAAAGGAAACTccaattttcatgaattttgtgtgaattctttgaa
tattttttgttgtgttctttttgcaaaatgataCAAAATCTTGCCAATAT
GATCAAAGATACTTCCGCattttattaatatttttaaGGGAATTCCATGG
CAGTTGCACTTTGGTATGTGGCCAGCAGTTCGTTTAGCAACACGTTTCTG
ATAAAACTGAAGTTATCTTTTTCGgaagaaacaaaaaggttaacgAATGC
AAAACTCTTCCACCAGTTGTTTTTCAAGACGCTGAAATTGAATGCAAAAG
TGACGTGAAGTACCTTGGTGTCATATTCGATGAGAATATGTCCTGGGAAA
AACAAGCTAGCAGTGTTCGTAGCAAAGTTTATCTTAGTCTAAACAAGATT
AGAAGAATATCACATCTAGTTGATGACAGTACTAAAAATCTACTAATAAA
CGCTCTTGTATTTCCGCATCTCAACTACTGCCTTAATTCATGGAGCAAGG
TGTCTGCTGCAGTATTACGAAAGTTTGATTCTCTTTCTCGGCAGATAAAT
CAAGTCCACACAATGAATAAAGATTTTCGTCAGCTTTGTGACTATTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026604-exon-sc0000576-1491911889:158882..158926 | TCONS_00026604-exon-sc0000576-1491911889:158882..158926 | Clytia hemisphaerica | exon |
| TCONS_00026604-exon-sc0000576-1510915933:158882..158926 | TCONS_00026604-exon-sc0000576-1510915933:158882..158926 | Clytia hemisphaerica | exon |
| TCONS_00026604-exon-sc0000576-1575043694:158882..158926 | TCONS_00026604-exon-sc0000576-1575043694:158882..158926 | Clytia hemisphaerica | exon |
| TCONS_00026604-exon-sc0000576-1491911889:160320..160779 | TCONS_00026604-exon-sc0000576-1491911889:160320..160779 | Clytia hemisphaerica | exon |
| TCONS_00026604-exon-sc0000576-1510915933:160320..160779 | TCONS_00026604-exon-sc0000576-1510915933:160320..160779 | Clytia hemisphaerica | exon |
| TCONS_00026604-exon-sc0000576-1575043694:160320..160779 | TCONS_00026604-exon-sc0000576-1575043694:160320..160779 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000576 | supercontig | sc0000576:158882..160779 + |
Blast
The following BLAST results are available for this feature:
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