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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026620 ID=TCONS_00026620|Name=TCONS_00026620|organism=Clytia hemisphaerica|type=transcript|length=907bp
ATGCAGTaaaaaccaatcaaatttgaaaCATACATACATGCATGCATATC
TTCCTTGCCTTTAAAAATATGAACATCATTAGACTGTCAGGCAAACAACT
GGGCAACATCCAGGTCAATCAACTGGGCCTTGCAAGAGCTTGCCCTCTCC
CcacgtgtttttttttcttctgtcaGACTCAATTTCTTAGAATAATGAAT
AATAAATCAGACAGCATCACGGAGGAGGGTGTCAAAAAGTTAATCGAAAA
ATCGGATTTTACAAAGaagttcaaaatttgaaatcgggCAAAGAATCGAA
ATCGGATTTGGCCGTGAAAGCACACTCATTATTGCCACCTAAATCCAATA
GCTCACAAACTTCAGCTGTGCTATATATATTTCGGATTGAAAAAGATTCT
CCCGGATTCAGGAGACAGGTTTTGAATATGTAAACACACTTTCGAATTCA
TGGAAGATTCAAAAAACTCTCGCTTGCATTCGTCATTcatcaaaactttt
ttgtaatttttgtgtTTTCGTGTTTTACTGGTTTTCATATCAATGTCCAT
AAACAAGCTTTCTGATGCTGATATTTGTGAAGGCGACATTCCCGCAACGT
AACCAAACATCTCTGAAAACATAATCATTTggttgttgtttttgttataC
TTCTTTCCCTTCAATTAACATAATGTCAACATGTAGAGAAAAGTCAAAAT
CTCCACATGCAACCTTTAATCTTACGCACAGTGCAAAAAGTCTCGTTATA
TTTAATTTCCAAACATATAGAgcatttaaaacattttttaactcgcGTAG
CTCGTTGATCCTCAATATTTTGAACATGAGTGTTATAATTGAGCATGACA
GTGTTTTCAATGCTTTCTATTTTTGTCTCAATTGTTGTTAGCATATCCTT
CAATTCC Run BLAST on NCBI transcript from alignment at sc0000576:143599..144505 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026620 ID=TCONS_00026620|Name=TCONS_00026620|organism=Clytia hemisphaerica|type=transcript|length=907bp|location=Sequence derived from alignment at sc0000576:143599..144505 (Clytia hemisphaerica)
GGAATTGAAGGATATGCTAACAACAATTGAGACAAAAATAGAAAGCATTG
AAAACACTGTCATGCTCAATTATAACACTCATGTTCAAAATATTGAGGAT
CAACGAGCTACgcgagttaaaaaatgttttaaatgcTCTATATGTTTGGA
AATTAAATATAACGAGACTTTTTGCACTGTGCGTAAGATTAAAGGTTGCA
TGTGGAGATTTTGACTTTTCTCTACATGTTGACATTATGTTAATTGAAGG
GAAAGAAGtataacaaaaacaacaaccAAATGATTATGTTTTCAGAGATG
TTTGGTTACGTTGCGGGAATGTCGCCTTCACAAATATCAGCATCAGAAAG
CTTGTTTATGGACATTGATATGAAAACCAGTAAAACACGAAAacacaaaa
attacaaaaaagttttgatgAATGACGAATGCAAGCGAGAGTTTTTTGAA
TCTTCCATGAATTCGAAAGTGTGTTTACATATTCAAAACCTGTCTCCTGA
ATCCGGGAGAATCTTTTTCAATCCGAAATATATATAGCACAGCTGAAGTT
TGTGAGCTATTGGATTTAGGTGGCAATAATGAGTGTGCTTTCACGGCCAA
ATCCGATTTCGATTCTTTGcccgatttcaaattttgaacttCTTTGTAAA
ATCCGATTTTTCGATTAACTTTTTGACACCCTCCTCCGTGATGCTGTCTG
ATTTATTATTCATTATTCTAAGAAATTGAGTCtgacagaagaaaaaaaaa
cacgtgGGGAGAGGGCAAGCTCTTGCAAGGCCCAGTTGATTGACCTGGAT
GTTGCCCAGTTGTTTGCCTGACAGTCTAATGATGTTCATATTTTTAAAGG
CAAGGAAGATATGCATGCATGTATGTATGtttcaaatttgattggttttt
ACTGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026620-exon-sc0000576-1491911889:143599..144505 | TCONS_00026620-exon-sc0000576-1491911889:143599..144505 | Clytia hemisphaerica | exon |
| TCONS_00026620-exon-sc0000576-1510915933:143599..144505 | TCONS_00026620-exon-sc0000576-1510915933:143599..144505 | Clytia hemisphaerica | exon |
| TCONS_00026620-exon-sc0000576-1575043694:143599..144505 | TCONS_00026620-exon-sc0000576-1575043694:143599..144505 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000576 | supercontig | sc0000576:143599..144505 . |
Blast
The following BLAST results are available for this feature:
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