TCONS_00026723 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026723
Unique NameTCONS_00026723
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1367

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026723 ID=TCONS_00026723|Name=TCONS_00026723|organism=Clytia hemisphaerica|type=transcript|length=1367bp
AGGAATTGTACTATAAGATGACGAAAGTGGCACCAATGTGTTTTGACGGC
GAACGTGGATGGAGAGCTAAAGATTTGTATAAGGATTTGtgcaggaaaat
caaattCACCGAGGAACAGACGTTAGCAGCTTGGTTGAAAAACTTTGATC
ATGAAGTTATCGAAAATTTGAATCAACCTTTGTTGAGACTAGACGATGGT
TTGTTCCATGTTAACTTTGACGAAAAATTGAAGATTGTGCTCCGTGAGAT
TCGTGACATGACTTCTCACGATATACCGATGAAACTTCCTCATGATGTCA
CgcagaaaattgaaaacattgaTATCTTGAAACTCCAAGCTGTTAATACT
CGACTTTCTGCTGCCACATCACAGTTTAATATCATGGAACAGAATCTATT
GGATATCGAACGCAATCTAGTCAATCATAATATCGACAGAGCAAGAAAGA
TTTTGACGGAGGGTGTGACCACTTATACATGGAATGATGTACACATGGAT
GATTTTATTCAAGAAGCCATTCACGTCGTTTATACAGATAATATCAAGAT
TGTAGACACGATTAAGGAGAACTATGAACGCATCTGTCAAATTGTCAATT
CATGGGCAGAATCAACCTTTCAGTACACCATGATGGATGAAAGTCATTGG
CCTTTTACTTTCGAAGATTATGATGCAAGACAAAAatCTATTATGGAAGA
tattcaaaggaaaatgaaaactgGATGTAAAAAGATCGTTCAACATTTAC
AAGCCATTTATGAAGTGGTCAAGATCAGTCGCACGACACCTCAATGGGTT
GCTTATAAAGAATTTGTGAACTCCAAAGTCATCAATGGTCTTCGCGATTC
TATATTGATTTCACTACGATACATCTATAATAGTCTAGTTGCTAAAGAAC
TTCAGgCTGGATCCGGGAATACACAGTTCCTACAAGTGGACGTCAGTCTA
GTTGGTTCAATCGTTTATTTCAAACCACCTGTAGACGGTTCTCTGGCTGA
AGTGTCCATGATCGAATATTTCGATAGCTGGTTATCCGCCATATTGACAA
GGACTGACTCGCTGAAAGAACTTGACTTGGTAAAAGAATTAAAGAGTTGC
ATCATGGAAGATCAAGANTAACTCCTCAGGACTTGGTAGAAGAATTAAAG
AGTTGCATCATTGAAGATCAAGATATTCAACACCTATGTGAACAGACCAA
AGCTATTGTCGCTGATACCGCCTCAGAATGCAAGgtcaaaaattcaattc
aacCGTCATGAACCATGAAAAGCAAATTCATAAATGCTGTCCTCCATCTT
GAAATTTGCTTTCCCGGCGAAATATCACATCATGATAATTTAtgcatccg
ccatcttgaaaactGTG
Run BLAST on NCBI

transcript from alignment at sc0000582:47358..61770+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026723 ID=TCONS_00026723|Name=TCONS_00026723|organism=Clytia hemisphaerica|type=transcript|length=14413bp|location=Sequence derived from alignment at sc0000582:47358..61770+ (Clytia hemisphaerica)
AGGAATTGTACTATAAGATGACGAAAGTGGCACCAATGTGTTTTGACGGC
GAACGTGGATGGAGAGCTAAAGATTTGTATAAGGATTTGtgcaggaaaat
caaattgTATGTACACTTGGGTCTTCGCGCTTTCAAACTCGAGCGAGATA
TCTAGTGATGTTCTAATGATTacagagacattcgagttaaccctgaagtt
gaaattttctgaatttcttttttaaagcttgtagcttttgatttagaaga
tggttttggtaccattggaaagctattttcatacttcttctaaaaaaaaa
agtttatgcccctttaaatcgaGTGGTCAGgagctaccttatcggccaaa
acttagtcagccttaattttagtcggccttaattattagtccgTCCTAAT
TTtggtcacctcgtcaaaatttagtcactaagggccgactaataactgag
ttttggccatttctaaatttttagtcagcccaaattttagtcggcccaaa
tttttagtcggctctaaatttagtcaccaagccaaaatttagtcacttag
agccgactaagttttgaccGATAAGGTATGGCCTCAAGTCTGAgactatt
ttggcttgttttggacgCATATACGCGTCCCTCGTGGTCTAAGGGTAAAA
GAGCTTTTATAAGTATCTTATATGGATCTTTTATTGCATTAACGGGGACA
AAGAATTAAGTTCGATATGTTTCGATAGAGGTATTTTGAATAATTGATAA
GCAAGAGTCTGGTACTACAGAGTTGGTAATACTTTGTAAGTGCTATAAGC
CTTACAGAGGTTAGACCCCCTTCcttgatacacattttttataagcaacc
ccaattttcgggtcagggacttgggttgcttagcattctagctcattttc
tgaataatttgCTTTGACTGGACCCTGTCACTAAATACAGATCTTAACCC
TTCTAAATCCAATTTTGTTTGATAAGTTTTAACGTTATTGAAGGATTGAA
TATCCAAAATTAAAGACATGTTGTTGGCTGATCATGTATTTGTTGATATT
AAAATCGTAGTTTCATGATCAAACTTTACTTTACTTTTCAGCACCGAGGA
ACAGACGTTAGCAGCTTGGTTGAAAAACTTTGATCATGAAGTTATCGAAA
ATTTGAATCAACCTTTGTTGGTATGTCATCTCGCCCCCTTTTTTATCGTC
TCCATTATTTTCTAAACACTCACCTTTCAAGATTCTCAATATACGATTAA
AACCTTTTAAAATCACTTTACCCGAAATTCCTGAGACTATCATAAggtca
tttcacagtcgcaaagcgtaatgggtaatcaggaccactgtgcgctaatg
acgacttactattggtctaaagttatgaatttttttgaagatttttgcgt
caaGCCACCGGAAGTCGTTACTACTGAGCGCTACCAGTCCTGAGCTACCC
ATGATGCATTTCGACTGTTAAAAGGCCTGTATCAACACTTACGACATTAG
ATAATTCGGTTTGTGTTGACTAATGTGGTCTAATGTGGAATAACCGTTCG
AGGTTATAGTCGTCATTAGCTTATTTTGAGTATGTAGTGCATAAACAGAC
CTTTTGGGTCATTCGACCCTGGTGAACTAAACcctgtcatttttttctaa
gaagcTTTTATagcaaaaaagattgaaaggcatacttcaaaaataagaaa
tacttctgaaaactcgaaaatatttttccactttttcaGAGACTAGACGA
TGGTTTGTTCCATGTTAACTTTGACGAAAAATTGAAGATTGTGCTCCGTG
AGATTCGTGACATGACTTCTCACGATATACCGATGAAACTTCCTCATGAT
GTCACgcagaaaattgaaaacattgaTATCTTGAAACTCCAAGCTGTTAA
TACTCGACTTTCTGCTGCCACATCACAGTTTAATATCATGGAACAGAATC
TATTGGATATCGAACGCAATCTAGTCAATCATAATATCGACAGAGCAAGA
AAGGTACATATTTATAAACAAATTCTGATAAATTTCAATTGTAAGTCTAT
GGACAATAGACATCAATCTTCAAAAAGCGATCCGTGATGTGAAATGCTTG
GTCTACATAACTAAAGCTGACAAAAATCAGAGATCATATTATTTTCGGGC
TGGAACTATATCCTAAATCGAACCATGAAGTCAAGATAGgtcttttccag
aaatagtccgtgccccccctAAAATACGATATCCAAGTTAAGCAttttta
taagagaggatatcaagagggttgagcatatttttaagagtggaagAAGG
GGTCTTGgtgtagtggttatcgtgcttgacttctgtccaggaggctcgag
ttcgatacccaccgtggcactacgattcacttggcaagtgaatgctcctT
CGCCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNCAAATTCTGATAAATTTCAATTGTAAGTCTATGGACAATAGGCA
TCAATCTTCAAAAAGCGATCCGTGATGTGAAATGCTTGGTCTACATAACT
AAAGCTGACAAAAATCAGAGATCATATTATTTTCGGGCTGGAACTATATC
CTAAATCGAACCATGAAGTCAAGATAGgtcttttccagaaatagtccgtg
ccccccccctAAAATACGATATCCAAGTTAAGCAtttttataagagagga
tatccagagggttgagcatatttttaagagtggaagaaggggtctttact
aataaagtaggatatccagggggttcgatactatATCCTCAACAGTtggg
gtaaattttttttggagcATTTCCATTACTTATTTTTAACACCTCAAACA
CGCGAAAAATCCGCATTATAACCTCTGTTAGTTTCCAAAAATAACAAAAC
GGGTCAGAGGCTAGATTTCTTTCGGATGTTTGAGAAAGTAGGTCAATTTT
TAACCTATATTAGAGAATACATAGAAAAGTGATTTAATTCTTTCAGATTT
TGACGGAGGGTGTGACCACTTATACATGGAATGATGTACACATGGATGAT
TTTATTCAAGAAGCCATTCACGTCGTTTATACAGATAATATCAAGGTAGG
TTGAAGCCTCATTAATTATGCTAACCCTTCAAACCCGAGATACGCGtaaa
tactttttaaatttgccaACATACCAAGTCCCAGACTTAAGGTGacaact
cctgaccacttgatttaaaagggcATAAACAACACTATCAAGGTACAAGC
TTTAATgccagtttgaaattttgaacttcaaaaaacaaaagttggaaatt
ttcacttttttcaaataatattttacAACAGAAACTTGCTAACTTCACAT
CAAAATTGGTTTTAATCAATTGGGTTCAAATTGATATGGAATTTTCAAGT
TGTAAAATAATAACatacacgttttattttttattaatacCCAGTTTAtt
agaacattgaggctgaaattcgtcaaaaaattaagaacatcgtaagaaca
tacCCAGCctcagttttgaaaattttttaggtgttttaataaaaaaaacg
tgtaacctttgaaaaagtcagaaagtttttgaaagtgaGTATACCTTTCA
AACATTCAAAGGAATTTCATCAAACAATATCTTCTGTATAAAGTTTAATG
GGAAGTTCCCGTATCGTGAAAAGAAAATACCACAGGAAGTtgttttttac
tgtttttactTGCTCCCGCCTTTGTGAAACTTTCTTATCCTCTTTGGGTA
CCACTtggcaaattttttaaaaacaatcgtTATTATGATATTTTAGAATC
TTCATTTTAGACATGCTCAAATACTACTTTTTCCTGCTCAAATTTCATAA
CTCGAAACTAGAaacctttagaaaaaaaaatataacggATGGCCGGTATA
AAActttatatttcaaaaagtacACAATTActcattttcatgttttcaac
GCTAAACAGTTTTAAGCTTTCATCGAACACTTTTGGCATATAGAATAGTT
AGAATTGCGATAAAAAGTACAACTACaacttttaaaggttttgttttgat
cgaAAGGTCTGATGaaaacaagtgcgacaagattagaaaaaggtttcaaa
aaaatgaaaatacattgaataaaaaaacattcctcaaacaaagggactct
ttcgaatattttcatgtttataataaataaaaCGTTTTATATCTTAtgta
taatcaaaacattcgattgtaatATTGCTCGAAATcatctttgctatttt
tttgtttacaaaagcaatagaatgCGAGGTCACATCTTGAAACAACTTTC
GATCCTTAGCTTGTTTGCAGTAAATCGTTgcgtaaaaaagtagctttaat
tTGACTCAGCATGAAGACACTGCCTAAAATCAGCTCCTTTTATTCCCGCA
GAAAACCTTTAAATCCAAATAAAAGATTAGAATAAAAATGGTGGTATGGT
AGCGCAAAAATACTTTTAAGATGGCGACAAAAGCATGAATTTTAGCACAG
ATGACCCTTTAGAGTTTCCAATACTAATTTTAAACACCTGAATACGCCAC
CTTGCCACCTGCTAGATGGATTACGTCCTTAGGAAatactttttcgaaaa
ttctgaTGGTGCTAGAGGAAAGGGTTTGGGGTTTTGAAGAAATCGAGGTA
TAAGATTATAATAAGTTCCCTATTAAATGTTTTTAAGGGTTTTAGAATGA
ATACGGATAAATTTTTCTAAGCAAAatttcacaatttcacaatttcgGAA
CCAACTGTNAAAATGAATACGGATAAATTTTTCTAGGCAAAatttcacaa
tttcacaatttcgGAACCAACTGCGactaaatttcatgttttatgtGGAT
TCAGAACTCGACGTTGTTTCTCTCATAAAAGTGACCAGGTTATCTCAAAC
AACTTCGCTCGAGCTTTGGAGCCTGTTTTCAAAGCAGTTTTTAAAGTAAC
CAAAATAATGCCGAAAGTATGCATCAGCTGTTCGCAAACAATTAGACCAG
TATGATTAAACGgtatcttttgttttattttgaacaaAGGGTAATTCCCA
CtcggtgaaaatttttttaccacaagtGGTTTTACTCCTCTACAATTTAA
GtcgttcatttttttaaattatattaCTCGGCTCCAGTTTAGTGTTCTTT
TAATTGTCGGGCGCCAATGTACTAAGTTTTTGTACGGCTTTTTAATAATC
CaagtaaaacatcaaaaatgaaagaaaaggcTATCGTTTACGGATTGACA
AAAGTTTCGTCAAACTCTAAATAGCAAATagttgattggttgtaagtgac
gtaaaatcagtcaatacgtcactttcaatcaAATAGTTTGTTGGGTCCGT
AGGGTCCGTAGACATTAGCAaggttaagcacgggtttatttttaccgtaa
agtgcgataccgtaggcctaTACATAACTTTCCAAAGCAAAacatgcaag
tgaaatcttatgttCAGGCCNGTACATAACTTTccaaagcaaaccatgca
agtgaaatcttatgttCAGGCCTACGGTATCACATTGAacggtctaaata
aacacttgcttaacctcgctattgcaatggtgcatatcatgaatttttgg
TTAGGTACACACTAATCTTAGGAGCGTTCAATAATTACGTCATGCTCAAT
TTGCCTTTTTAGTACCCCCCTCTCATCACGCTCTGTCACGTTTTTAAACT
AGCCGTAGCTGTCACTTAATGCCACCATATTTAAGGtgcttttgaagaaa
ttttattttttatacaagAATGAAGTTTGGAATGCTAAAACCCTAAAAAC
TTAATTAGGACCAAAATAgaaataagcaaaaattaaGCTAACAGATCACA
AAAGTGAACGAGACTGAACACTTAAGAAGCGAAAAATAATTTCAGCTTCA
ATTCAAAATTCAcgaataaaataaatatttacagCGCGTCCCGGTATAAA
GCGGTCAATAAATGCGAAGAGACCTTGACATAAATCATTTCATAAGTGTT
ATTTCAAATGAATTACATGTACATAATATTAATTAAATTGATACCGTAAT
GTAAATAACTGCATCATTCAAAAAGTATCTTTGGTTGAATTGTCGTTACC
AACTTGATTATTTCAATAGTATGAAATTTCGCAGAGAATTAAATTGCACG
AATGagccatttttcaaattcagtgtcGATCGCAACTCACGAAAAATAAC
CAAATCGCAGCTTATCCCACAGTTTCGACTATCATATATTGGGTCAAATC
ATGCATCACGTtccaaaattttgccaaatcacgatcacgctcAAACCTCC
AATCATGCCATCACGTAAATATTGCTAAGGTTGCCTCTTTATAGAGGATA
TGGGTATTATCACAATATTGACAGGAAGTCCAGAATTTTAATAATAACAT
ATACAACAAAACACTTTGTTGTAGAAGTTTTGTTGTTAAAGACACTATCC
TTTCCTCGTCTCGTCTCTTCCTTTGCTCCAATTTGTAAGGAAATCGTTAA
TCTTATGGGAATTGCCAGTCTGGAATTTGTGCACAGCCAGGATGCCATAT
ATTCAGCGTGAAAATGCCCTCATATCAGTGGAATCTGTCTTCACCCTCAA
AACATCTTTGGTGTGGCTTTTGCACAAATTTCATGGTGAAATTGCTCATT
CCAATCCAGTTCACATTCTCAAATTCCGGTATAGTGTTTGTCTGGTTTGT
TTCAaattgaaagtgtttgtttgtTCTATAATTTAAAAAGTGAAGGACGT
TCCAGTTTTGGAAATATATAAACATCAAAGTACAGAGTATATATTGTAAG
TAGCTATGTTATCCAAGCATGACTACATTCAAGTTTGCATTTATCCAGAG
TATATTAAATGACATTATCAGTTCTGCCTGCTCTAAAAAACAACACTCTA
TGTTAGGCTAGAAACATAGCCGCCCAAATAAACAATACTGAGGTATTACA
GATAAGACTAAGAAATAgctccaaaaaaaattaataaaaagcagggTGAA
AAGCAGTAGAAAacatggctccgactggggttctaggtccccccgctaaa
tttaggtcccccctaagaacaaggtccccccagcctgataaaattttagg
tcccagtataataggggaaacatttttgatgaataattttttttcaatgt
gaaTTTTTACCATTTAGTCAATGAAAATACAAGTAAATAAACAGTAAAGT
AAACTAGTAGTAACTTAACATTATACAACTTATGCACCCTTGAGTTCTTA
AAATTGCCCTCTGAAATAGTGCCAAGAGGCAGTTTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGTTTCCAAGATtaattttccctgact
tttggtTAAAAATCCACCCTTTTCCCCTGACAATTATCATGATTATTTgg
aggacccaccatggttgggtccgacaagaaacattttgaaaagaggAGAT
TCCAAGATTggctaaaaatcatcaaattcaaggcattctgaaaaaaaatg
ccctgacttttccaggttttgACTGACTTTTTCTAAAAGCAGTCCGTTTT
CCAGGTTTTCCAGGTTTTCCCTGACCGCTGGGAACCCTGCAAGGATTtcc
aaagctctatttacatatGTGTGCACTTCTAAGGATCAGATCACACTTCG
CATGAAGACATAAAGgttttttagagaaattaaaaacagtaaagaaaaat
atttaggaagtgtTATTTAGCCCCCAGAGTTACATAAAATTATGCAGGTC
CCCCCCAAGATAGAGCTCCCCCCGCCTGTCAGGAAAAACAAACAGCTCCC
ACCTCTTATATGGCAAATTTGAGGTGTAGCTCCCCCCGCTcaggcggggg
gggggggggcgggccATGGGAAAAAATCTTTCCCAAAAAGCCTGGgcttc
ttttgaattttttttttttaaaaaagaaattccaatTGAAAAGcgtgttt
ttttgaaaaagttttttttaagggccccccccccccccccgggggggggg
gggggggggtgcgagcCATGGAAAAACATCTTTCACAAATAGCCTGGTCT
TCATTAGGACTTCTCTTTCATAAAATAACAACTAAAATagcaaaatattg
caaaaaaattataaacaaagtgtttttcttcataaaaagcAACCTCAAAT
CTTTGTTACCGTGACGTCACGGTCATTGGACTATTACCCCACCTCCCCCC
TCATTTTCATCACGCTCCATCACGAAAAGTAcgaagtaccccccccccca
gcaTGATGTAACTATTGAACGCTCCCTTATACCAATTGAGTAGAATGTGA
CCCCATTGTCCGGTAAGCAAATGTGGGTACCTTCTGGTGTATTGTCTAAA
AGATCTCCGTGCATTTCAAGGGGAAAtggtgaagtttttttcaaaatttt
ggccaGATGCACAATTTTTCTAGTGTAttactttaaccctattcaacgtA
GGCTTTTAGAGGGACTTTTCCTGTAcaaccccttaacttttgatctagtg
ggtctttttggatgaaatttggcacacaaggtccttgtcacataaggtaa
cttttgacaaaagattttttgatgacgtcacttatcatgcccaaagtgag
caaaaaccgaaaatttcctttgttcttataaatagctattgtattctaac
aaaggctttagaaaaaagttgcttgagtttaaaattttttggtgtcgatt
tttttattttgaagctaagcaaaagttaggaatttgcagaaaatttcatg
gcaaaagttctactatttcaggagctattaccaataatttgacctccaaa
cagaaacagccccctaGGCCAAATAAGGTAAATTCTTAATCCGATTAGAA
GTATAAAGAACTTAAAAAACTTAAAGCCCCGTTTTTGTAGCTGAtgcaat
gatttttttcttacattttcagATTGTAGACACGATTAAGGAGAACTATG
AACGCATCTGTCAAATTGTCAATTCATGGGCAGAATCAACCTTTCAGTAC
ACCATGATGGATGAAAGTCATTGGCCTTTTACTTTCGAAGATTATGATGC
AAGACAAAAGTAAGATGTTTACGAGGAAATCGAAATCGCTGACCTGCAAG
AGATAGCGAGACTCCACAAATGCGAACTGATGAGTGTTGGTGCATAGCTC
GATATTGGGAGAACGGTGTTCTTCGCTAGACCGAACCTAAAGCAAGTGTT
GCAGTGTGACCAATATGATTTGACTGGAGCCGCCCGCTACTGCAGTTTTC
TCACTAaacctttgattttttaatttcatttcagatCTATTATGGAAGAt
attcaaaggaaaatgaaaactgGATGTAAAAAGATCGTTCAACATTTACA
AGCCATTTATGAAGTGGTCAAGATCAGTCGCACGACACCTCAATGGGTTG
CTTATAAAGAATTTGTGAACTCCAAAGTCATCAATGGTCTTCGCGATTCT
ATATTGATTTCACTACGATACATCTATAATAGTCTAGTTGCTAAAGAACT
TCAGGTAGAAAGATATTTTATTTGGGAAGAACccatacattttttttata
agaatagtgtactttgggtgagcattattcttattgttCTCTTGTTCTTT
ACAATATTCCTATTGTTCTAACTCCGAAATCTCTCCCTGATATTATTATa
caagttattcttataaaaaagctattTTATAAGGTTCAATCGATCAGAAC
CCGGATAATTTTACCTTCATTGCCTCTTTTCGAGGCCTTTTCTATGTTCT
TGTCAGCCTCTAGACTGCTGTCCAATATTTGACTGCCATCCGAGagataa
tagcgagtttatttaTTCGAGATACATCgtgggggacggtataaagcaaa
gttgacatgtcctCAAACTCACCGTCCACCGTccgctcgacgacggtaaa
aacaccaaaataccatcgtctgtttaggtgagcaaaggcgatatagagcc
gtacatcaactatcgactttgatttgtatcgatttcacttttaCCGTCGA
CCTCGATATCCTcggatacataaactcggtaattcTTCTCCAAAAGAATA
GTGATTaaaagttcacttttttttacatttaggCTGGATCCGGGAATACA
CAGTTCCTACAAGTGGACGTCAGTCTAGTTGGTTCAATCGTTTATTTCAA
ACCACCTGTAGACGGTTCTCTGGCTGAAGTGTCCATGATCGAATATTTCG
ATAGCTGGTTATCCGCCATATTGACAAGGACTGACTCGCTGAAAGAACTT
GTAAGAGTGTTTTATCAATCTTCTTGAGATTTTGTTTTTGACCTGATATA
TTTCTTCAAATTGTAaggctttttattttttctttaccCTCTATGCGACC
GTAGTGCAAAGGTACAGTATTTGACTACGGTGCGCTtggtcgtgggttca
atccccggcCGGTTGATATCAAAGAATTCGtactttgtacaaaaaattgt
taaaagtAGTTTAGCTTTActttattgaatttttcaaatttgcaacATTG
GTTTATCAAGAGCATTATTTTGACTAAGAAATTCGGACAAGGTGTATTTT
AATTATATCCAATCCCCAATAACTCCTCAGGACTTGGTAAAAGAATTAAA
GAGTTGCATCATGGAAGATCAAGANTAACTCCTCAGGACTTGGTAGAAGA
ATTAAAGAGTTGCATCATTGAAGATCAAGATATTCAACACCTATGTGAAC
AGACCAAAGCTATTGTCGCTGATACCGCCTCAGAATGCAAGGTGcgtttg
ttgtttcttcattttttggactttccctggaggtcctataaattaaccga
tattcttccgttcgtctgttcgttcgttcgttcgtttattcgttcgttcg
tctgttaccagcttttctcgggattgacttttagtctttttaattttttt
tgcacaatgatacaaaatggtaATACCCAAAATGTCACGGGCCCCGATGT
TcgggaaaattctttttctggcCTCCAGATTAAGAAATATCTCGGGATTT
ACCTCCTGGAAATTCTAGAATGacattttaccccctggaacaAAGGGAGA
AAACCCtttttagaccccctggaaaatcttctcggattaccccctggaaa
tgcgcgtccaccccctgtatgggtATAAAATCTAATTGCCCATTGAGATA
CGGTTCAAGTAAAATGAAGTTGGAAATCCAGGGttgtcagtaaaatgagg
ttaaAATCCAGGGGgatcagtaaaatgaggttgaaaatccaAGGGGTCTG
AATTTTGAACACAAAATCCCAGGTAAGTGTGTGGGAGCACAGTACTATCA
TGGAGGGGGGAATCAAGGGggttcaaaataaaagaaaaaggtggtcctga
aaataaatttaacaaaatcCAGGGGATCACCTTTCCTTAAAAAGACCACA
gcatttgaaagatttttctgGATTAGCcgaatttcaaaacatcacCTGAT
CTTCTTAACCTCTTTATGTTTTAGTTACAAGATAAACATGGGTTGccaat
taaagtctattcacgataagtgtgcactcttttttcttttacctataact
tttgaaggaattcttcaatctttataaatttggtatcattggaaagNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgaa
gatgaaaatgaagaagaaaaaaatgaagatcttgtagaatactgctataa
ctttcattttcactggagagattctttgatcttagNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
aaaaaactgcagaaaacagcgtttttagacgtcaatcagcttataacttt
gtttgatatcttttgactgaatgattatttttgagaaattttttcacagt
aataacgttcgataatcaaggattcacttcacgGAAAATggtagttatag
cacttttctacaagatcttcatttttttcttcttcattttcatcttcatt
tttagaatttttttaaagNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatctttccaatgatacca
aatttataaagattgaagaattccttcaaaagttatcggtaaatgaaaaa
agagtgcacacttatcgtgaatagactttgattgcttttacaaaaaaaaa
aacttttctcggTGCTTTATTGGTTAAATCAGTAattcatcattttcatt
ttgaagggGCGTGACATgactaaatttcaattttcatatttcttaAACTT
TAACACAATAACTTTTAAAAGAAGGTTTTTGGGCCTCAACAAAGCCTTAT
AATCTtatgaaaatgttcttatatccTAAAAAACGTTTATCAACTGTTAG
TTCTTATCTCCGTTAGGGAACTTAACTTTCATTATAATTCTCTTTAATGT
AAATGTAAGGTCATTGAAGATACgggattattttattttatcattaAATC
TTCCGTGGTCCAGAGGAAAAACTCAACTTTTATTGCAATGAAATTGTACG
TGACCAAACGCTCTCTGAAAGCCTGACCATGTGGTCTCTTAAAATGTGAT
TGCTCTCATTCAATAGACCTGATTATAATGGCTTTTTTTGTTGTAGCGTG
TCTTCTTGATTCTAacattcaaaatacaaaaaaagacaTATATGGTGAAA
TTTCTGAATATTGCGACTTTTTTATCGAgtcattgggctcttccagaaaa
aaattgtatacgtggagtggaggatataacaattttcagtgatttacccc
tcggacaaagtgacttttgaccccctggacaacgGGTTtcacccccggac
aagcatcagctGACCCCCTGGACACCCGAAATTACCCCCagacagagcaa
aattaccccccggacaaggtaaattttgacgattttttgctacccccgga
caatatatcctccacccgggatgtacgaacattttctggaagagcccatt
gtcaACAGTAGAAAATGTTCAGAAACAGATACAAGAAAACTTCAATTAGA
AAAACAATTATTAGGAGAATAATTGCAATTCCTTAGAAGCTTTGTTCAGA
GATAATGTAATCTAATATCTAGTTTTCAATGTCAATTATTAATGTTTTCT
TGCTGTAAAACAGAACaattccaatttttcaaaatggtgtaAACCAACGA
AAACACACGTTCTAATCTAAGATACAAAAACACATCATAAGCATTCCCAA
GTTGTTTTTGATATACTTTATTCTATTTAGgtcaaaaattcaattcaacC
GTCATGAACCATGAAAAGCAAATTCATAAATGCTGTCCTCCATCTTGAAA
TTTGCTTTCCCGGCGAAATATCACATCATGATAATTTAtgcatccgccat
cttgaaaactGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015029XLOC_015029Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026723-exon-sc0000582-1491911889:47358..47463TCONS_00026723-exon-sc0000582-1491911889:47358..47463Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1510915933:47358..47463TCONS_00026723-exon-sc0000582-1510915933:47358..47463Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1575043694:47358..47463TCONS_00026723-exon-sc0000582-1575043694:47358..47463Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1491911889:48449..48527TCONS_00026723-exon-sc0000582-1491911889:48449..48527Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1510915933:48449..48527TCONS_00026723-exon-sc0000582-1510915933:48449..48527Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1575043694:48449..48527TCONS_00026723-exon-sc0000582-1575043694:48449..48527Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1491911889:49097..49360TCONS_00026723-exon-sc0000582-1491911889:49097..49360Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1510915933:49097..49360TCONS_00026723-exon-sc0000582-1510915933:49097..49360Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1575043694:49097..49360TCONS_00026723-exon-sc0000582-1575043694:49097..49360Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1491911889:50804..50902TCONS_00026723-exon-sc0000582-1491911889:50804..50902Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1510915933:50804..50902TCONS_00026723-exon-sc0000582-1510915933:50804..50902Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1575043694:50804..50902TCONS_00026723-exon-sc0000582-1575043694:50804..50902Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1491911889:56830..56966TCONS_00026723-exon-sc0000582-1491911889:56830..56966Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1510915933:56830..56966TCONS_00026723-exon-sc0000582-1510915933:56830..56966Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1575043694:56830..56966TCONS_00026723-exon-sc0000582-1575043694:56830..56966Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1491911889:57192..57411TCONS_00026723-exon-sc0000582-1491911889:57192..57411Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1510915933:57192..57411TCONS_00026723-exon-sc0000582-1510915933:57192..57411Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1575043694:57192..57411TCONS_00026723-exon-sc0000582-1575043694:57192..57411Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1491911889:57990..58157TCONS_00026723-exon-sc0000582-1491911889:57990..58157Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1510915933:57990..58157TCONS_00026723-exon-sc0000582-1510915933:57990..58157Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1575043694:57990..58157TCONS_00026723-exon-sc0000582-1575043694:57990..58157Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1491911889:58488..58648TCONS_00026723-exon-sc0000582-1491911889:58488..58648Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1510915933:58488..58648TCONS_00026723-exon-sc0000582-1510915933:58488..58648Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1575043694:58488..58648TCONS_00026723-exon-sc0000582-1575043694:58488..58648Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1491911889:61638..61770TCONS_00026723-exon-sc0000582-1491911889:61638..61770Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1510915933:61638..61770TCONS_00026723-exon-sc0000582-1510915933:61638..61770Clytia hemisphaericaexon
TCONS_00026723-exon-sc0000582-1575043694:61638..61770TCONS_00026723-exon-sc0000582-1575043694:61638..61770Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000582supercontigsc0000582:47358..61770 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	10.4144	6.36446	1.57235	1.98471	0.660038	0.911189	0.404819	0.503363	0.165431	0.69282	0	0	0	0	0	0	0	0	0	0	2.58391	1.77787	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026723 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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