TCONS_00026731 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026731
Unique NameTCONS_00026731
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length646

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026731 ID=TCONS_00026731|Name=TCONS_00026731|organism=Clytia hemisphaerica|type=transcript|length=646bp
TCTATCTCAATTCAAGACACAATGCCAAGAGTTACGATACGAAATCGAAG
ATTCGAATGTATACAGTCGTTCGATTGAAATGTCAATGGCCTACACACTG
ATTGACCAGTTTGGTAAAGAAGTAGAATTATTGGAGGCTGAATCACAGGT
ATTTATACTCCACACCTATCTTTTCCGTTAAGGTTTTTGGCACAAAATAC
ATTAACTCGTTTTATTTTAATGATTATAAATTTTATAGCAGGCCTAAATA
AactaaatttcacaaaaatggtGTGCACATTACACACTTATATGATCTCT
CAAGTTTAATTCAAAGAAGGATAAAGTAAGGCTGAATCAGACATGTACTT
TTTCTCCAGTTACATCGACCATACCCGCTTAAATTTACGATATCGAGTTT
TTGGAGAGCCTTCGAATAGCACGTTTCGTCAGATGAAAACTTCTATCGTC
ATTTTTCACCGACAAGTTTCCCCTTTAAGGGTAAAATAGAATAGGTTTTT
ATTTCAACGAAAGTGAATGCCTTCTACGTTTATTAAtctaacaagacgac
ttaaagtcgaaaatttcgcataatattagaacatcaacgacgaaaacgcg
tgaaacgtgactcttgcagcattatgcattattttgaatgaagcgt
Run BLAST on NCBI

transcript from alignment at sc0000582:78038..78683+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026731 ID=TCONS_00026731|Name=TCONS_00026731|organism=Clytia hemisphaerica|type=transcript|length=646bp|location=Sequence derived from alignment at sc0000582:78038..78683+ (Clytia hemisphaerica)
TCTATCTCAATTCAAGACACAATGCCAAGAGTTACGATACGAAATCGAAG
ATTCGAATGTATACAGTCGTTCGATTGAAATGTCAATGGCCTACACACTG
ATTGACCAGTTTGGTAAAGAAGTAGAATTATTGGAGGCTGAATCACAGGT
ATTTATACTCCACACCTATCTTTTCCGTTAAGGTTTTTGGCACAAAATAC
ATTAACTCGTTTTATTTTAATGATTATAAATTTTATAGCAGGCCTAAATA
AactaaatttcacaaaaatggtGTGCACATTACACACTTATATGATCTCT
CAAGTTTAATTCAAAGAAGGATAAAGTAAGGCTGAATCAGACATGTACTT
TTTCTCCAGTTACATCGACCATACCCGCTTAAATTTACGATATCGAGTTT
TTGGAGAGCCTTCGAATAGCACGTTTCGTCAGATGAAAACTTCTATCGTC
ATTTTTCACCGACAAGTTTCCCCTTTAAGGGTAAAATAGAATAGGTTTTT
ATTTCAACGAAAGTGAATGCCTTCTACGTTTATTAAtctaacaagacgac
ttaaagtcgaaaatttcgcataatattagaacatcaacgacgaaaacgcg
tgaaacgtgactcttgcagcattatgcattattttgaatgaagcgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015029XLOC_015029Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026731-exon-sc0000582-1491911889:78038..78683TCONS_00026731-exon-sc0000582-1491911889:78038..78683Clytia hemisphaericaexon
TCONS_00026731-exon-sc0000582-1510915933:78038..78683TCONS_00026731-exon-sc0000582-1510915933:78038..78683Clytia hemisphaericaexon
TCONS_00026731-exon-sc0000582-1575043694:78038..78683TCONS_00026731-exon-sc0000582-1575043694:78038..78683Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000582supercontigsc0000582:78038..78683 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.398031	0.418254	0.862829	1.6798	0.656893	0.6056	1.14813	0.625149	0.210851	0.270025	1.03587	0.549691	0.386624	0.192861	0.230497	0.197887	0.426616	0.16229	0.0878418	0	0.463594	0.11486	0.150171	0.265987	0.488602	0.721694	0.26997	0.243987	0.0901088	0.121571
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026731 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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