TCONS_00026747 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026747
Unique NameTCONS_00026747
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length583

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026747 ID=TCONS_00026747|Name=TCONS_00026747|organism=Clytia hemisphaerica|type=transcript|length=583bp
GCCATCTGATGCGGCACCACGTGACATTTTAACCACATGGTATTATGAAC
TTCACTGGACATATCATTACGTATTGATTGATGACGTCGACAAAGAAAGA
TGGCGTCACACTTTTAAAACCATCGCTAAGAAGGAACTTGCTAAGGAACA
GGTGAGcatatttttttgagaaaattgatattgaccttttcataaattac
gttgcGATtgcgaacatcacttgcctcgttttgaaattattgtcatggtg
attactcccagtggattttattaaaactacttcctattcataaaaaaatc
atttaatgtctcaagagacataatcactATGGTAATTGtctgaatacgag
gcaagtgatcttcgtgacgtaatttatgaaaaggtctattgtaaaGGGTA
TGATTTCTCTATGATTATACAACCTCGCGACTGGAATTCTACGTCGCAga
gattttgttttgattcagtGTTTTGATTACCATGTCTTTGTGCCAGCAAA
TGAAACTTACTGTTGGCCAGAGCAAAGTAGGCCCTGAAATCGGTTTTTGT
GCATTGCCCTCAAGACCTTCTGTGGCGAGATAC
Run BLAST on NCBI

transcript from alignment at sc0000582:141872..142454+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026747 ID=TCONS_00026747|Name=TCONS_00026747|organism=Clytia hemisphaerica|type=transcript|length=583bp|location=Sequence derived from alignment at sc0000582:141872..142454+ (Clytia hemisphaerica)
GCCATCTGATGCGGCACCACGTGACATTTTAACCACATGGTATTATGAAC
TTCACTGGACATATCATTACGTATTGATTGATGACGTCGACAAAGAAAGA
TGGCGTCACACTTTTAAAACCATCGCTAAGAAGGAACTTGCTAAGGAACA
GGTGAGcatatttttttgagaaaattgatattgaccttttcataaattac
gttgcGATtgcgaacatcacttgcctcgttttgaaattattgtcatggtg
attactcccagtggattttattaaaactacttcctattcataaaaaaatc
atttaatgtctcaagagacataatcactATGGTAATTGtctgaatacgag
gcaagtgatcttcgtgacgtaatttatgaaaaggtctattgtaaaGGGTA
TGATTTCTCTATGATTATACAACCTCGCGACTGGAATTCTACGTCGCAga
gattttgttttgattcagtGTTTTGATTACCATGTCTTTGTGCCAGCAAA
TGAAACTTACTGTTGGCCAGAGCAAAGTAGGCCCTGAAATCGGTTTTTGT
GCATTGCCCTCAAGACCTTCTGTGGCGAGATAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015030XLOC_015030Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026747-exon-sc0000582-1491911889:141872..142454TCONS_00026747-exon-sc0000582-1491911889:141872..142454Clytia hemisphaericaexon
TCONS_00026747-exon-sc0000582-1510915933:141872..142454TCONS_00026747-exon-sc0000582-1510915933:141872..142454Clytia hemisphaericaexon
TCONS_00026747-exon-sc0000582-1575043694:141872..142454TCONS_00026747-exon-sc0000582-1575043694:141872..142454Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000582supercontigsc0000582:141872..142454 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.0990969	0.620343	1.45434	0.130235	0.303263	0.122189	0.114175	0.165058	0.152377	0	0.139524	0.0636824	0.0655181	0	0	0.0712112	0	0	0	0.370454	0.301316	0	0	0	0.0911053	0.826464	0.226893	0.366855	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026747 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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