TCONS_00026753 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026753
Unique NameTCONS_00026753
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1463

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026753 ID=TCONS_00026753|Name=TCONS_00026753|organism=Clytia hemisphaerica|type=transcript|length=1463bp
GTGAACGTGGAGTCCGCCGGCATAGACAATTGTGTACGTAGCGAGCACCA
TTATCTTCACTTTTCCAAGAATTTGGAAGAAAGcaaataaaacaaaaatc
tttttcaaaatgttacTGGTAATATCATTCATTGCGTGTATAATTGGCAC
CATTCAATCATATCCAACCAAGCAAAGTCATGTTCCATATTTCCACAAAG
GACGTCCTAAAGGTGGATTTCTTGGTGACCCCTACATTGATCcaagacaa
aatttcaaagctGCTGAACCGCAATGGTACACACAACAATTAAACCATTT
CGATGATCAAGACACTCGAACATGGCAGCAAAAGTATTATGTCAATGCCA
CTCAATTTGGTGAAAATGGACCAGTTTTTCTAATGATTGGAGGTGAAGGA
CCACTCAGTGCTCGTTGGGTTGGTGTTGGCTCAATGGTGGAAATGGCCAA
AGAACACAAAGCACTTGTCTTGGCTTTAGAACATCGATATTATGGTGACA
GTCATCCAACAAGtGACACTAGTGTTGaaaatctgaaatatttgagCAGC
GAGCAAGCTTTGGCTGACTTGGCGACTTTCAGAGCATCTATGGTGGAACA
GTTTGCATTGAGTGATAAAAACAAATGGATTTCTTTTGGTGGTTCATATC
CTGGTGCTTTGTCAGCATGGTTCAGATATAAATTTCCACATCTGGTTCAC
GGTGCCGTTGCTAGTAGTGCACCCATCAATGCTCAAACAGATTTCCCTGA
ATATTTGGAAGTGTCTACAGATTCTTTGGGCACACAAGAATGTAAAGACA
GTGTACAAGCGGCAACTACCAGTGTGGAAAAATATGTTCAAACAGAAGCT
GGGCGGAAAATGCTGACTGATCTCTTCCATCTTTGTGAGCCTCTGAGTGA
CGATCCAAACGACATTTCTCAATTCACTTCATCAATGGCTGGTAATTTCT
TTGGTGTCATCCAATACAATAAAGACAATCGTGCTTTCGAGGGAGCCACA
GGTACCAACATCACAGTGGACACATTATGTAACATCATGTCCTTACCAAT
ATTTGGTGATGAGATGCATCGCTATGCCAAGATCAACGAAATCATGATGG
AAACATACAAACAAACTTGCATCTCACccaattataaaaaattcattGAA
GAAATGAAGGTCATCGATTGGAAATCTGTGGAAGGAGGTCGTCAATGGAC
ATATCAAACTTGCACCGAGTTTGGTTATTACCAATCATCGGACAGCAAAT
CACAAGTCTATGGCACAACATTCCCTTTGAGTTTTTGGACGAAACAATGT
GTGGATATTTTTGGCGCCAATTTCAACGAGACGAGTATCAACCGAGCTGT
TGATTGGACCAATGATAATTACGGTGGCTACAATATGAACCAACCAAgga
ttgtCTTTCCGAACGGTTCAATAGATCCTTGGCATGCGTTGAGTTTCACC
GATGATCATNACT
Run BLAST on NCBI

transcript from alignment at sc0000582:4811..17629-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026753 ID=TCONS_00026753|Name=TCONS_00026753|organism=Clytia hemisphaerica|type=transcript|length=12819bp|location=Sequence derived from alignment at sc0000582:4811..17629- (Clytia hemisphaerica)
GTGAACGTGGAGTCCGCCGGCATAGACAATTGTGTACGTAGCGAGCACCA
TTATCTTCACTTTTCCAAGAATTTGGAAGAAAGCAAATAAAACAAAAGTA
AGTTCTATCTTTCCACTTTCGTTTCGTTTTCAACTTTGGGCAGATGGCTG
TGGGGGACCAAATAAATAAAGGCGAGTTTAGAAATTTTGGTCAACTTAAT
TATACATGTTTTTTTTATTTTTGAAGCCTTCAAATGATTCTAGCTTTTTC
AGTCTGTCAGTCAGAAACATCTGGCAAGGCAAGTTCCTGTACTCAGCCGG
AAAATGTTATATCGGATGGCCAAAAGTCACCTTCTTTTCTTTCCTATCTC
TTATCCTATTTTTCTCTTTTCTGACTGTCTGAGTTTCTGAGACTTTCTCA
TTTCTGACTGAGTTTTCATACCTGTCAATCATTTATTTGTCCATCAATTT
CGACCTGTCTAATGTCCAGACGGTGTCAATCGAACAACTTCGAACAAAAA
TCGCAATCGAACCAATCGAACGTAATTGAACGCGATCGAATAATTGCGAT
TCGATTGTCCAACGTAATCGAATCTTAATCGAACGGCCGATTCCTGGGTA
ATATTAGATTGTGTTCGATTGCGTTCGAGTAATGTTCGATTGATAGTTGA
CTATGTTCGATTGGTTCGATTGATTGTCAATTACATTGGATTTATGTTCG
ATTACGATTATGTTCGATGAGTTTGATTGCGATTAAATCAAATTGGATCA
CTCTGTTAGAGCTTTTTAGCGTGGGCGGCCGAGTGCTTAAGTACCATAAC
AAAGCGAATAAAATCTAACACACAATTGAATCAATCGAACGTAATCGAAT
ACAATTGAACGTAATCGAAGCAATCGAACAGTAAATCCTGGGTAATATTC
GATTGCGATTCGATTGCGTTCGACAATCGAATTGCAATTATTCGATTGCG
TTCAATTGCATTCGATTGATTCGGCGTTCGATTCGTTCGATTGACACCGT
CTGGTAATGTTCGCACCGAGTGGGATTCGAACCACCACCAAAGAAAGATC
TTCAGATTCGGAAACCAGCGCTCTATCCGTTGAGCTATCGCCGCACAGCA
AATGATACAATTCATAACATATTATACCGAACTGGCAAAGACGGGGGTAA
TATTATTATAATATGGGTAAAAGTACCCCTTTTTTAAACCTGACTGAAAT
TCGAGCCGTTACTAGCAACCCTGCGGGNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNCCAAACAACAAAACCCCCGGAAAGGTGAC
TATCAGCGATCCGTGGATAAAAAAATAAAATAAAAAAATGAAGGTGACTT
TTGGCCATCCGATCTAAGAGCATCCTACTCAGCCGTAATAGACCTTTTTG
CCTTTCTATCCGCCATCATGAATTGTAAAAATACAGGAACGAAAAAGCTG
TGGTTAGATTTAGTTGAAAAGCATGCAAAATATGCAAGTTTACACAAAGA
TTTTTAAAAAAGACAACAAAGCACCTTATAAATTAACAATAGATCCAAAA
GGGCGTCCTTCTAAGACAATTTGCTTTGGTCTCTAGCTTATTGGGAGGTA
GTAATGTTTTTGGTTGTTTTCAATGGAAAATGTACCGTCAACTGCTCCAA
CTTCTTTGGACTATCTGACAAAACATGGGACGGCAATTCGGCCACCATTT
CACCGAACCTCCAAAGTCATTTAGGGGCCGTCGACAAACGATTTTCCTTT
TTTTTAACAACTTCTGGCCGTAAGGGGTGGGAGGGGGTCACTGCAATGCA
GTTAAAAAAATTTTTAAAAAGGGAAAGTCTCACTTACAAATTTCATCAGT
CCAAAAAGTAGAAACATGTGAAGAAAGGCTAAGACCAAAGCAACCACACG
ACATTCACCTTATTCCCGATCACCAATTAATGCTTCAACGAGAAAAATGA
CTGGTCACGCGACGAAAGTCGGCAATTTTTCCCCCCGCCTTAGTTGTCTC
CTTGCTCCACCCATCCCGCCCTGACTGGCTGCGGGGCTTGGGGTTTCAAA
ATTGAAAGGTCAAAACTCAAAACCACATGTTTATTCCGAGTGAAAAGAAG
AACATTGAGGATTACGATTCAAAAGAACATGGCGGCTATGGACCAGTGAA
AGTGTGTGAAAGTATTTACTTTTGAAGAATTTTTTTGGCCGCTAAGACGT
AGGGAGGAGGGGGTCTGAACCTTAACAGCCTCAGGCCGTTATAAAAAAGG
ACAGTCGTTTGTCGATNAGAATTTTTTTGGCCGCTAAGACGTAGAGGGGG
AGGGGGTCTGAACCTTAACAGCCTCAGGCCGTTAAAAAAAAGGACAGTCG
TTTGTCGACGGCCCCTTAATTTGAGTTAATGAACAGCGTATTAAAAAATG
CACGATTTCTCCTTCGCACTGAATAGGCTTTTAAATCGAAATATGAAAAA
AATCCGTAGTGGAACACAAGCAAATGTTGGAACGAAGATAGACAGTGAAC
CCGTCTGCGTATTTTTTCTAAATCTGATGAGTCAGAGCTGTGAGTCCGAT
TTTGGCCTCAAAAAAATTACAGTAGGAAATTCGAATTTAGCGCTGTCCTC
ACTTACTAAAATAAAAACCAAATTTCAGAACTTGCGATTTCTTTAAGAAA
GTGTGACTAAGTGAAACAATAACAGGATTTGATTGGCTGGGTTTTCAACC
GCTATTAGGATATGTGAAATTCAAACTGTCAGCCCATACCATGCTATATA
TTTCGCCATCAGTATATAGAATAAGAAATCATAGCATGGATCTCCAGGCT
AGAACAAAGAAGACCAAATTAGTGGCAATACTATGCACATGCGTTTGCGT
AGGGTAAAATGGCGAAACCGAAATGCGAAAATTGAATTTGGCTAAAATTT
TTTGAAAATGACCCTACAAGATTTGACCATATCTTTTTATTCAATGAAGA
GATTACTTTCAAATAAAAAATATATTGACAATGAATGGGTAAGCTTTCTA
GAAATCCAAACATCAATTGCATAGCTTTTACCAAAAAATAGCACTTTAGG
ATCAGAAACAGTCAAAAACCAGCTTTTGCCAATTTTCATTGAGTTACAGG
AATTAATTCCTTGTTTGTTTTGATCTGAAATTTTCAGTAGGGGTGGCCAA
CATGGTTCCCTTGCTCCTATCAGGGGGGCCCGAGGCGGGGGTAAGAGAAT
TAAAGTTTCTAAGTAAAATCTTTAATTATCACCCAAAAAAGTGCTTTTTT
TTGTCCATATCTTTTAAATCGATAGTCCCAGCCTTATCCCTCCTTCAGTA
AAGCTTCCTATACATTTTGTCCTTCAGAAAAACCAAAAATATGGGCCTTA
ATTGTTTGCTTTCAGTTCCTGCAGCCAATAGTGTGACCCCCTGTATTTCT
ATTTTATTTTGCGCGGGTTTTTCAATAGAGATGTCACATGACTCCAATCC
CGCAGTCTTATTGGACTAGAGAAAGCGAAAGTGAAATTGCGCGATTTGAT
TGGATGGAAAAAAAAGGGAACTGGAACCGAATGGAATTCTCTGGAATTCT
CATTCTAAAACAAGATGGCGGCGAGAAAAGCACGTCTTTTGCTTTGGACG
TTGGTTGATTTTAAGGTTTTGTCTTATCTTATCTCATTTACTTTAATTAG
TAGAGGCTTCTTCAATATTTGGGGAAGGTAAGTCTATAAAAGTTATTTCT
TTTTCGGTGGAAAAAAGTGTTTTTAAAAAAGCATTTTTTGTGCTCAAGGT
TTATTTTCTTCGCAAATTTTTGTCTTCAATCTTAAATAGATGAACAAGTA
TTTCACTGATGGTTATGAATTTTTCAAAGAACATAGTAAAACTATTCAGG
AACCTGGAGTCATCAAATCAAATTTGTTGTCAAAGAGATTTAACAGCAAG
TGAAAATACCGGCCAGAATATCAACAGTCCCATGTTTTGACCAATCGTCC
CTAGTTAGAGCAGTTGACGATAAGAAACTTAAGTTTACAAGTGTCATTTA
GTTTTTGCTGGCCTATAAAATGGCAGGATCCTGACTTCCCAGAAAAATCT
TTGTGCCATTATTAATTTCCCTATCATGTATAGCAACGACAGATTTTGTA
AAAATTGGAGACTGAACTTTTCAGAAAAATAAGCATAATTATGATAAGCA
TACTTTGAGTCTGAGTCTAAAATAACCCTCAGCATAACTGAGCTTGTTTC
CCAAAAACATATGCTTAAAAAGACATGTATGCTGTATGCGAGCACTAAAG
CTAAAGTCCTCCAAAAGCAGGAAAAAAAATCAGTTTTTTAAAGTTTGTAA
AAAAATGCAACATGTAAGATCTTTCAAATTAGGATGTGAATAGGATTTTG
GGTTACTACGTTTTAGGGCAACACTGCCTGTAATAGATCAATTTCACATA
TACTGAGTTTTTTATCTTAGTGACATTCTCAGACCTTGTGACATACTTGT
ACTTTTCTAGTACTGTTTCATAAGAAGCACATCATGACATAAACCTTTTT
CGAGTCTGCTAAATGACGTGCCCTACGTGCCCACGTGCCCTCATTTTTTT
GACGTGCCTTCGTGCCCTACGTGCTTTACGTGCCTTCGTGCCTTACGTGC
CCAACGTGCCTACGTGCTCGCGTGCCCTCCGAAATTTTACGTGCCCGACG
TGCCTACGTGCTTACGTGCTTGCGTGCCCAAATTTTTGACGTGCCCTCAA
ATTTTGACGTGCCCTCGAATTTTGACGTGCCCTCGAATTTCGACGTGCTT
CAAATTTTGACGTGCCCTCCAATTTTGACGTGCCCTCAAATTTTGACGTG
CCCTCCAATTTCGACGTGCCCTCCAATTTCGGCGTGCCCTCAAATTTCGA
CGTGCCCTCAAATTTTATCGTATTGTCAAAATTAACAACAGTATTGTCAC
TATGATGAATTATATACTACACTTGGTTGGGGTTTTAAAGTTGGAAGAAA
AAAAATATGAAGAACATCTTTTGTCTGCTTATAAAAGAACATCGACGAAA
AGAATTAGCAAGAAACAACGAGGGAGATGGTTAAGCATTACTTCGAATCA
AACTAAATAAAGAACTTTTCTGATTGGTTGAAAAAAGAGAAAATATGTGA
GACGCGTGCTACTTACTTTTTATCAGCTGGCTCTCTTTTTATTTCAAGTT
AGGGGATATAGTGTTAATTATAAGAACTTTTTGAAATAGAAAGGAATTTT
TTAAGATTTTAATAGAGGTATGGCATTAGAAATCCCTTCAAATCTTAAGC
ATCACATTGAAATACAACTTGAAATTTTGCACAAAGACAGTCTCATAGTT
TTTTGTTTCCCTATATGTATAAAAACTTTTTTAATTCGATGCCAATTTTT
TTGGAAATTTGTATTAAAAATGGTGTTTGCATTTTGGCAAGATCGTATGT
TGTCTCCACTTTAAAAGGAGAACATTTTAAGTAAAACATCATAAAGTCAG
TGACGCTGAAAATCTTAAATCCGCTGACCAAAAAGAAAAGTTTGTGTTTC
TTTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNGACTTTTTGCGATTTTTTTGTGCAGAACGAGGAACAGTTTA
ACTTCACAGAAGAATTCATAGGAGAGGGACGAAATGTCTTCTGATAATGA
ATCATCAAGGTATAGGGCACGTCAAAATTCGAGGGCACGTCAAAATTCGA
GGGCATGTCAAAATTCGAGGGCACGTCAAAATTCGAGGGCACGTCAAAAT
TCCAGGGCACGTCAAAATTCGAAGGCACGTCAAAACTTGAGGGCACGTCA
AAATTCGAGGGCACGTCAAAATTTGAGGGCACGTCAAAATTCGAGGGCAC
GTCAAAACTTTGGGCACGCAAGCACGTAGGCACGTCGGGCACGTAAAATT
TCGGAGGGCACGCGAGCACGTAGGCACGTTGGGCACGTAAGGCACGCGAG
CACGTAAGGCACGTAGGGCACGAAGGCACGTCAAAAAATGAGGGCACGTG
GGCACGTAGGGCACGTCATTTAGCAGACTCACCTTTTTCAACTACAGCAG
AGACCAACCCAGTCAAAATCATCATCAAATAACATCCAAATGAAAATGTA
AATGACGTTAGCACTCAGATTGAGAATGTGATAGACTTTTTGAACAAAAT
ATTTTTAGTTATGTTCATTTATTTTTTTAAATCTTGATAAAAATAATTTC
AATTTAATATTACAAGACATAGTTGTGTAGATGTGTACCCTTTACCATAT
GATATCGAACAGGAGACAAATCCTAGCCCGTGTTGATCACCTTGGCGCCA
AAAAGGGGGCTAAAAAATATCTGACAGGATTGCAAAATTACTAAATTTAT
AACAAGTATACTTGACAGGGTCACCATGATCTTTTCATTACTTTGTATGG
GAAAATATCAGATTCTGCATCAGACAGGGTCCAAATCTTGTATATTAATG
GTAATTATCTGCCTAATCGGAAACCATTTTTATACAGTACATGACTTAAA
GGATTAATTTTTAAGTTATCTTATCGGTTTTAGATCTTTTTCAAAATGTT
ACTGGTAATATCATTCATTGCGTGTATAATTGGCACCATTCAATCATATC
CAACCAAGCAAAGTCATGTTCCATATTTCCACAAAGGACGTCCTAAAGGT
GGATTTCTTGGTGACCCCTACATTGATCCAAGACAAAATTTCAAAGCTGC
TGAACCGCAATGGTACACACAACAATTAAACCATTTCGATGATCAAGACA
CTCGAACATGGCAGCAAAAGTATTATGTCAATGCCACTCAATTTGGTGAA
AATGGACCAGTTTTTCTAATGATTGGAGGTGAAGGACCACTCAGTGCTCG
TTGGGTTGGTGTTGGCTCAATGGTGGAAATGGCCAAAGAACACAAAGCAC
TTGTCTTGGCTTTAGAACATCGATATTATGGTGACAGTCATCCAACAAGG
TGTGTTGTAGATTTGTGTTCAATTTATATCTTTGACCTTAGTTATCCTGA
TAAAAGGATTTCGCAAATATTGCAAAATCGAAATATGGTTATTGCAATTT
TCGAGCCTATCTTCAACACTTTTTGTTATACATTTTGGTGATTTAGATTT
TAAGGAAAATCCAAGTTATAAGTTATAAGTGTATAGGTGCTAGTCAAGTT
TATAACCTAAAGAATGTACTGTATTTATTTAATCCTTCTTTAAAACGAAT
ATATTTNGGTGCTAGTCTAAGTTTATAACCTAAAGAATGTACTGTATTTA
TTTAATCATTCTTTAAAACAAATATATTGTTTGTTTTGAAATAATTTATA
TGGGGCATTTTGTGCCTTTAATTATAAGTAGAATTATCATTTTTGTTTTA
GTGACACTAGTGTTGAAAATCTGAAATATTTGAGCAGCGAGCAAGCTTTG
GCTGACTTGGCGACTTTCAGAGCATCTATGGTGGAACAGTTTGCATTGAG
TGATAAAAACAAATGGATTTCTTTTGGTGGTTCATATCCTGGTGCTTTGT
CAGCATGGTTCAGATATAAATTTCCACATCTGGTTCACGGTGAGTTTTAT
TTCGTTGATTTTAAGTAGGGTTCATAAAAGCATAATGAAGGACCAACCAA
TTATGCATCTTTTTTAAGTGCTCCGAACCCACAGTGTATGCCTACTATGC
GTGACGTATTTTAAGTATTCATTTGGGTAACAAAAATCCTTTGTTTTATT
TTATTCTTTTCTTGTTTATAAAGGTGCCGTTGCTAGTAGTGCACCCATCA
ATGCTCAAACAGATTTCCCTGAATATTTGGAAGTGTCTACAGATTCTTTG
GGCACACAAGAATGTAAAGACAGTGTACAAGCGGCAACTACCAGTGTGGA
AAAATATGTTCAAACAGAAGCTGGGCGGAAAATGCTGACTGATCTCTTCC
AGTACGTAAGACAAAGGCTGCATTCTAGTAACCAATTTCCATAAGCGGTT
TTAGACCATGTCGAACTTATCAGAGGAAGAGATTTGTAATTGTAATTTCA
TTGTTTTTTAACGAGCGTTGCACTCATTCGCATGTTTCCGACGTACTTGC
TCTATTGTCTTAAATCCGCCAGTATTTCCATTACTTTATCAATTACGATC
AGTATATCTAACATTTCGAGTTTCGTTCCAGCATCATGCTTTTTCTATGG
TAATTTGAGAATTTTATATTTTTAGAGGAAAAGTTACGTTACGTAACGCT
CTTTTTGACTGGATACCACATCGATTAATTGCACCCACGAGAGGTTCAAT
GAGGCATAGAATAGTTATAGATAGATAGAGTCGATATTTTACGTGGATAA
CCCAGTAGTCTAGGACTTTTAGACAGTCTTTCGATTGTTTTCACGGGGTC
CACGGCTAGCCGGCGCGGCTATCTATGAACTGAACGGAACATTGGAAGGA
GTTGGGATTCGAGCCTCGAATCCCTGGTTTGAGATGCTAACTNCATTGGA
ATGGGTGGGGATTCGAACTCGAACTGCGAATCCTTGGTTTGAGATGCTAA
CGCTTTTGACCACTTGGCCATCGCTCCATAAAGCTCCATAGTTCTCTGAT
CGTGGCACAAAATTCAAGAAGTGTACCTTTTAGTAGTTGATCTCTATATT
ATAATGATAGTCTTTTCTTATGTTTACAGTCTTTGTGAGCCTCTGAGTGA
CGATCCAAACGACATTTCTCAATTCACTTCATCAATGGCTGGTAATTTCT
TTGGTGTCATCCAATACAATAAAGACAATCGTGCTTTCGAGGTGGGTACA
AAAATTAGTGTATGATGATTGCTAATGATACAGTCCCCAAGTTAAGGGAA
CCAATGTCTTAGTTTGAATTGAAGGCAGATTCGAATAACATGTTAGAACT
ATATGGAGTAGAACGTATATTCAGTGGACATGAAATTTTACGTAGAGGTA
TTCGGGATATAATGTCTTCTGACATTACATCACTTTTATAACACCAGATT
GATTGCAACATATTCATGATATGCACCACTGCAATGTCTTCTGTATTACA
TAAAGGACCCAATAGCTGAGTGGTTGTAAGTGAATAATTAGTCAATAAGT
CACTTTCAACCAATCAGCTGTGGAAGACATTGCAATTGCAAATATCACGA
AATGAGTGACCAGAAAAGATGCAGAATTTCGTGAATTCGTTGCAGTGGTG
CATATCGTGGCCTTAGTGTAATTTCATTGTTTGAGAAATTTATAATATAC
ATCGATCAGAATGCACTAATTAATTCGTCTAAGGAATTTTTACATCACTA
TCTTTTGAATTGAATCTTCGCCATAGGGAGCCACAGGTACCAACATCACA
GTGGACACATTATGTAACATCATGTCCTTACCAATATTTGGTGATGAGAT
GCATCGCTATGCCAAGATCAACGAAATCATGATGGAAACATACAAACAAA
CTTGCATCTCACCCAATTATAAGAAATTCATTGAAGAAATGCAAGTCACC
GATTGGAAATCTGTGGAAGGAGGTGACACTATTTTACGATTCGCAGCCTC
TGATACTGTTTCAGTCTGAATCTGCACATTCCAGAAAGCCTTACACGTGT
AAAAGATTAGTATAGCTAAATGATTTGAGTCCAACCTTTAACAGCCCCGG
CAATCACATAGGTGTTAAGATTTCTCGCAATGTCTTCCTCGAGATTATTA
AGAATGACGTCACAGTTTGATTTCCAGGAGGTCTCTTCAAATTTTAAAAC
AAGAAAAACCTACAACGTTTGCCATGATATTTGGAAAAAAATGAAATTCC
CTCAAATTTAAAAACACAGTTGGTGTTTTGAGTTCTTTAACTAAGGTTAG
AAAGTAGAGTTTTAAATCTGAGTTTTTAACATTAGAATGTCAATGTATCA
AAAAGTTCAAAAGTAGTGATCCAACAAGGCTTAGAATAAAGCTTGAAAGC
CAATAAACCATCCCAAATTGAAAAGCTCAATGAGGCTGAAATCACCGTTC
TCGCCCAAACTTGAAATTTCAAAAAACGATAAAATACACCGAATTCCCAA
TATATTTTGACTTGTAATGCAGGTGGTATCCTCTTTTCTTGACCTCTCCT
AGTCGGGATCTTTATTTATTGTTATCGAGTACTCTTAGGTCCCAAATAAA
CGGGGGGGGTGGGGAATTTGTGAGATTTTAATAAAAGGGGGAGACCTAAT
TTCCGGAGATGATGGAAAACCCTTCTGAAATGGATGGAAAACTACTTCTG
AAAACCCAAAAATAAGGTAAATATAAGGCCAAAATCAGGCTATTTAGAGC
AAAATAAGGGGCCTTCTCTTTAAGACAGCTGAAAATATTTAAAAAAATTA
ATAAACGGGGGGAGGTCCTAATAAGGTCCGGGGGGTTGGAAAATTTTCGA
AAAATTTACAAGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGTC
AATAAGTCACTTTCAACCAATCAGCTGTGGAAGACATTGCAATTGCAAAT
ATCACGAAATGAGTGACCAGAAAAGATGCAGAATTTCGTGAATTCGTTGC
AGTGGTGCATATCGTGGCCTTAGTGTAATTTCATTGTTTGAGAAATATAT
AATATACATCGATCAGAATGCACTAATTAATTCACTAATTTTTACATCAA
TATCTTTTGAATTGAATCTTCGCCATAGGGAGCCACAGGTACCAACATCA
CAGTGGACACATTATGTAACATCATGTCCTTACCAATATTTGGTGATGAG
ATGCATCGCTATGCCAAGATCAACGAAATCATGATGGAAACATACAAACA
AACTTGCATCTCACCCAATTATAAAAAATTCATTGAAGAAATGAAGGTCA
TCGATTGGAAATCTGTGGAAGGAGGTGACACTATTTGTGAGATTTTAATA
AAAGGGGGAGACCTAATTTCCGGGGAGGATGGAAAACCCTTCTGAAATGG
ATGGAAAACCACTTCTGAAAACCCAAAAATAGGTAAATATTAGGCCAAAA
TCAGGCTATTTAGAGGAAAATAAGGGGCCTTCTCTTTAAGACAGCTGAAA
ATATTAAAAAAATTTATAAACGGGGGGAGGTCCTAATAAGGTCCGGGGGG
TTGGAAAATTTTCGAAAAATTTACAAGGGGGGGGGTGTTTGGGTGTTTAT
TTGGAATCTAAGAGTACATTAAACATTGAATTGATATAACTGAAAATCCG
GTTCAAAACAACACGAGATGATGAAGCTTAATTGATGTTTTAAACTTTTT
GTTCACAGGTCGTCAATGGACATATCAAACTTGCACCGAGTTTGGTTATT
ACCAATCATCGGACAGCAAATCACAAGTCTATGGCACAACATTCCCTTTG
AGGTAAGATTGATAAGGCTCCTTGGCCAGTTTGCAGCATTCTTGGCTTTT
CAGATTAGCTTTAAATGATTTGAGAGGGACTAAATTTTTTTTTTAATTCT
GAAAAAGACACATGAGCGCTGACACTCCTTTCTATGACTCTCTCTTTAGC
TATTCATATTATTCTGAACTTTTACACCCCTTGCCAAAATAAATTCCCTT
AGTATGTTTAATTTCAGCCCTGGGAAAGATTTAGTGAGGTAAAGTCAATT
GTTAAAGCTTCTCAATCTCGAAGCCGTACCCAGAGCAATTTCCACCATTT
ATTTTATTTTTCTGGTGAACGTAAGTGCAATCGTAAGCAATATCAAAATC
ATAAGAAAATAACTGGGTATGAATTCCGTAGACTAATTTTTCTCTCGTGT
TCACTTTATCTAGTTTTTGGACGAAACAATGTGTGGATATTTTTGGCGCC
AATTTCAACGAGACGAGTATCAACCGAGCTGTTGATTGGACCAATGATAA
TTACGGTGGCTACAATATGAACCAACCAAGGGTATTTCTTTTAAAATCTT
TAACGATTTGGAAAATTGATTTGAAAGCTATAGAAATGGGACAAGTTGGA
GTTTTTGCAAGCTCTTATTTTATTTGGTTGGTCGTTAACCTGTAATAATG
AATTAAAAAACAATTTTGCGTCAAATCCAGATTATATCATGGATATTGAT
AAATGTTTTCCCGTTACAGCCATTTTTAAGCCATAGAAAATCATATACAA
CACTAAAAATCCATTTAGTTCTCCGAACTATTTTTCATTGCATTGTGTTG
ACTGATATTCTCTAGAACGAAATTTTGGAACTAATTTTAATCTCACTAAG
AATTATAAACATGCTCAAATTATTGAGTATCACCGATACCTCTCTTTTTT
TTCAGATTGTCTTTCCGAACGGTTCAATAGATCCTTGGCATGCGTTGAGT
TTCACCGATGATCATNACT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015031XLOC_015031Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026753-exon-sc0000582-1575043694:17533..17629TCONS_00026753-exon-sc0000582-1575043694:17533..17629Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1575043694:10281..10696TCONS_00026753-exon-sc0000582-1575043694:10281..10696Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1575043694:9691..9878TCONS_00026753-exon-sc0000582-1575043694:9691..9878Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1575043694:9329..9506TCONS_00026753-exon-sc0000582-1575043694:9329..9506Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1575043694:8489..8600TCONS_00026753-exon-sc0000582-1575043694:8489..8600Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1575043694:6256..6451TCONS_00026753-exon-sc0000582-1575043694:6256..6451Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1575043694:5778..5871TCONS_00026753-exon-sc0000582-1575043694:5778..5871Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1575043694:5249..5366TCONS_00026753-exon-sc0000582-1575043694:5249..5366Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1575043694:4811..4874TCONS_00026753-exon-sc0000582-1575043694:4811..4874Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1510915933:17533..17629TCONS_00026753-exon-sc0000582-1510915933:17533..17629Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1510915933:10281..10696TCONS_00026753-exon-sc0000582-1510915933:10281..10696Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1510915933:9691..9878TCONS_00026753-exon-sc0000582-1510915933:9691..9878Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1510915933:9329..9506TCONS_00026753-exon-sc0000582-1510915933:9329..9506Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1510915933:8489..8600TCONS_00026753-exon-sc0000582-1510915933:8489..8600Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1510915933:6256..6451TCONS_00026753-exon-sc0000582-1510915933:6256..6451Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1510915933:5778..5871TCONS_00026753-exon-sc0000582-1510915933:5778..5871Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1510915933:5249..5366TCONS_00026753-exon-sc0000582-1510915933:5249..5366Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1510915933:4811..4874TCONS_00026753-exon-sc0000582-1510915933:4811..4874Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1491911889:17533..17629TCONS_00026753-exon-sc0000582-1491911889:17533..17629Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1491911889:10281..10696TCONS_00026753-exon-sc0000582-1491911889:10281..10696Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1491911889:9691..9878TCONS_00026753-exon-sc0000582-1491911889:9691..9878Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1491911889:9329..9506TCONS_00026753-exon-sc0000582-1491911889:9329..9506Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1491911889:8489..8600TCONS_00026753-exon-sc0000582-1491911889:8489..8600Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1491911889:6256..6451TCONS_00026753-exon-sc0000582-1491911889:6256..6451Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1491911889:5778..5871TCONS_00026753-exon-sc0000582-1491911889:5778..5871Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1491911889:5249..5366TCONS_00026753-exon-sc0000582-1491911889:5249..5366Clytia hemisphaericaexon
TCONS_00026753-exon-sc0000582-1491911889:4811..4874TCONS_00026753-exon-sc0000582-1491911889:4811..4874Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000582supercontigsc0000582:4811..17629 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.84734	6.67889	2.05491	6.67654	0	0.66217	3.58596	3.62407	4.12465	0.00315385	5.55358	2.36702	12.9437	11.4153	2.41267	2.76819	8.57356e-05	2.42213	3.35366	1.74946	0.634614	0	1.78247	7.96533	1.33295e-07	2.61465	6.35091	6.06024	9.71856	8.6636
Blast
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BLAST of TCONS_00026753 vs. Swiss-Prot (Human)
Match: TSSP (Thymus-specific serine protease OS=Homo sapiens GN=PRSS16 PE=2 SV=2)

HSP 1 Score: 238.424 bits (607), Expect = 2.829e-71
Identity = 145/418 (34.69%), Postives = 221/418 (52.87%), Query Frame = 2 
Query:  260 AAEPQ--WYTQQLNHFDDQDTRTWQQKYYVNATQF-GENGPVFLMIGGEGPLSARWVGVGSMVEMAKEHKALVLALEHRYYGDSHPTSDTSVENLKYLSSEQALADLATFRASMVEQFALSDKNKWISFGGSYPGALSAWFRYKFPHLVHGAVASSAPINAQTDFPEYLEVSTDSL------GTQECKDSVQAATTSVEKYVQT-EAGRKMLTDLFHLCEPLSDDPNDISQFTSSMAGNFFGVIQYNKDNRAFEGATGTNITVDTLCNIM---------SLPIFGDEMHRYAKINEIMMETYKQTCISPNYKKFIEEMKVIDWK-SVEGGRQWTYQTCTEFGYYQSSDSKSQVYGTTFPLSFWTKQCVDIFGANFNETSINRAVDWTNDNYGGYNMNQPRIVFPNGSIDPWHALSFTD 1453
            AA P+  W  Q L+ F+  D R++ Q+Y+VN   + G++GP+FL +GGEG L    V  G    +A    ALV++LEHR+YG S P     +  L++LSS  ALAD+ + R ++   F +S  + WI FGGSY G+L+AW R KFPHL+  +VASSAP+ A  DF EY +V + SL      G+ EC+ +V  A   VE+ +++  A +  L      C PL    N  ++   ++     GV+QY+       G TG  ++V  LC ++         S P  G       +  +I++ +  Q C+S +  + + +++  + + S  G RQW YQTCTEFG+Y + ++    +     L      C  +FG   +  S+ +AV  TN  YGG      +++F NG  DPWH LS T 
Sbjct:   54 AALPKVGWLEQLLDPFNVSDRRSFLQRYWVNDQHWVGQDGPIFLHLGGEGSLGPGSVMRGHPAALAPAWGALVISLEHRFYGLSIPAGGLEMAQLRFLSSRLALADVVSARLALSRLFNISSSSPWICFGGSYAGSLAAWARLKFPHLIFASVASSAPVRAVLDFSEYNDVVSRSLMSTAIGGSLECRAAVSVAFAEVERRLRSGGAAQAALRTELSACGPLGRAENQ-AELLGALQALVGGVVQYD-------GQTGAPLSVRQLCGLLLGGGGNRSHSTPYCG-----LRRAVQIVLHSLGQKCLSFSRAETVAQLRSTEPQLSGVGDRQWLYQTCTEFGFYVTCENPRCPFSQLPALPSQLDLCEQVFG--LSALSVAQAVAQTNSYYGGQTPGANKVLFVNGDTDPWHVLSVTQ 456
The following BLAST results are available for this feature:
BLAST of TCONS_00026753 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
TSSP2.829e-7134.69Thymus-specific serine protease OS=Homo sapiens GN... [more]
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