TCONS_00026773 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026773
Unique NameTCONS_00026773
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length5570

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026773 ID=TCONS_00026773|Name=TCONS_00026773|organism=Clytia hemisphaerica|type=transcript|length=5570bp
CAGCATTCATCAATTATTTATCCAAGATCAGATGGAACAATCAGAATCAG
CATCAGCATTTCATAATGTAGACCTTGGTGACCCAGTATCAGATGAAGAA
ACCAATCCAATCATTAAGAAAGCGATGAATAATATTGCAATGTCCAGTGA
AGCGATTTCATTATACAAGTCTGCTGTCAAGGAACTAGAAGATGCGAAGA
TACTTGCTCTTAGAAAACCAATGACTAAACTTGAACAGGATTTTTTGACA
TTGGCCAGCTATGACATCTGCTCTGGTACTTTCTTTTCTTTGGCTGTTAA
GCTTGCCAGTGGGAAAACCTGTGTTTACTATTTTGAATCCGGAAATTTTC
ATGGTTTTATGGATGATGTGGGCTTGATAAAACTGCAAAAAATCTACGGG
GAGATCCACATACCGATATGCTGCTATTCAGCCCAAGATATAATATTGAA
GCGCAAAAGAAACATGAGTATGTTCCAAAACAAAAGATCAAAAGATCATC
CCAGGTATGATGCGTTCAAAAGAAAAGTCTACGATGATAAAGATTCAATT
GACCAATGTCTGAAAGTTTTGGCTGACAGCCTTTGGCAACAAGATGGCAT
CAAGATGCTTGGAGTCTTTGCTCTTTGTCTGAGAAAAGAACAGAAATGGA
GAGACGTTCGTGATGAAAAAGATCGAAGTTCACAAAGGTATTGCTTCAGC
TTCCCGAAAGAACATCAATCTGAACTTGAGTCCTCATTGACAGACTTTAG
ACCTTCCTTCAACCATAAACTGATATGGAATGACATTGAGACTCCAAGCA
TCAGTCAACAATTTGCTGTCGTGAACTCTCTGCCCAACTTCCATTATTAT
TCTTGGGATGGGAAACCTGTCAAAGTGGTTCGGTATCAAGATCGCTTACC
ATCTGCATCCAAACCAAAATCACCAAGAAATATAATTATCAAGGCGTTTG
AAAATGCAGACTGCGCTGGTTATGTCATTTCGTCAACAATATCACATATC
ACTGGTCACCCCACTGATTTACCGCATGTTATCTCTCAAAcaagcaagag
aagaaagGTAGCCAAATCTTTCCTGGAGAATAATGAAAACTCACGAGAAG
GATCCACTCGACAAgAAGCACATCCAAGTCATGCTCATTTAGAGGATTCT
TCAGTTGATTCCTCCGATCAAATGGAAAGCCAAACGTTTGAAGATGGATg
gaatgaaaatgaagataCTGAAATAGCACATACACCTaccaaagaagaaa
attttCTCCAGCTCGAACAAGCATCACCCCGTGTAACTTCTCTCTTCAAA
TTTTATTGCTCGGAATTGATTAATCGTGGATCCATTTTCTGGAGAGTTCT
TACAGATCGTCAGCAAGTTGTTTGCATGAACGCTTTTCATGAAAAAACCG
GAAACTTCTTGCCCAAAGAATTTGTTCACGTCACCTTTACAAATTTCGAC
GACGGGTCACTGCACATGTCATGCACCTGTCAAACATCAACGCTGACAAC
AGGTTTTTCTGTTGGCAAGAAGTCTACTTCAAAAGTCTGCCTCCATAAAA
GacttatcaaaaatataaacaactccgaTGACAAAATCATTGACGATGCA
ATAGTGGCAGAAGGCAAAACTCGAGTCGAAGATAAAGTTGTTATGCTGCG
TAGTAAATCTGGCATCGAAAAATACTCCGTTGTAGGTTCTGATGGTTCGG
TGTCCTTCGTTCACGTAACTGCTAATCTTGGTCGTCTGATGGTCAGTTGT
CAATCAGGATCGTGTAACTTTGGCCAAGGTGGTAAAAGTCGGAAGCTTTC
GTCTCTTTCATCTCCCGAATGCGGATGTGTTCATTTAAAGGAATTCAGAC
GCTTTCGAGAGATTCCTGCTGATGAACCAGACGATGAATTAAAAGACTTT
ACAGAATTTGTTATCCCGACAGAAAAATTGGAAGAAGTATTCGATGTCGA
AAGTGGTTTATGGACCTTCCACAAAAATTCGCCGAGCAAAATAAATGTCA
GCTCTGACAGCACGTGTgaaacattgaaaaagaatttcaaagcaAGAATA
ATTCCTGAAACTGGCTCCTTGTATCAGTCCAACTCAGAAAAGTGTTCGTG
TGGGAATTATTGGCAAAAGAAGAAGCGTACTTCCACGTTATACTCGATGA
TGAGTGCATGTGACATCGAGGTCATCGAAAAATACTGCGTTTGTGGTAAA
CGAGAAGAATGGGATGGTGCTGAGCACTCTATATATCGGTCAACGCGTTC
CACGTGTGCTGGGTATGAGCTAGGTTGGCAGTTCGTAAACACGGTACTTG
ATAGTGGAACattcagtggtttcatttcaaaaatgaccTACAACTACGAG
CTTTCATCCTCTCCACGTCCGTTCATGTCGCTTCAAACGTTCATCAAGTG
GTTTTTTGGATGGGCTTCTGCAATGAACATTGATTTTCGGATGGGTTGTA
AAGGCTGCGGTGAGAATCCCAAGgtATTGGCATGTGACGGAACCAAAATT
GGTACTAACTTTAAAAACGTGTTTGTCACTCCGATTGAGAAGCCAAGTTA
TGACCATCCCACGGAGACTCTTGGTGCTATGGATCGCTGCCCGTTGAAAA
ACCAATTAGCAAGAACAGCATTTGCAGAATTAGTTGATCAGGATACGACT
GAGCACTTTGAGGCCATCCCTGACGAGTTAAAACCTTTTGCTTCTCAAAG
AAATGAAACAGATGTTGACCATCTTAAAAAGGCTTACTCCAATGTTTACA
AACAACTGTCAAGAACATCTTCCGTCGACACAATTATTNAGGCCATCCCT
GACGAGTTAAAACCTTTTGCTTCTCAAAGAAATGAAACAGATGTTGACCA
TCTTAAAAAGGCTTACTCCAATGTTTACAAACAACTGTCAAGAACGTCTT
CCGTCGACACAATTATACCTTTTGAGATTGTCGAGTTTTGTCTGCAAGCC
TCAGAGTTTGCACTTCTTGGGCTTTCATCGTTATCGAAAGTGCATGAGCT
CATTTCGTTGTTTACTTCATATAACATGGAGATTGCTACTTTAATCAGGA
GCTCCTTGACCGTCCACAAGTCTCCCACAAGAGATATTTTTGACATGATA
CGTTACTGCTGCAACAAATGTAAAGAAGTTCACGCACATGACGTAAAACC
TGAAGGTGCAAATCCTATTTCTGGTACATACAACCCTCCACGCGATGGTA
GGGCTTACTATTTTAGCAACCATGGACAACAGATCCGGAAAATAAGATCT
TTCCCAATTGATAAGCGGAATCAGGCATCAAAACCATCAACTGAATGCAG
TAAGAAATTTCCTGTTGTCAGCAAAACTGGCACAAGCTATCTGTTTGCCT
GGTTCTGCCCCTTACATGGCCATTGCTATGGTTACCACGTTATCCCCTTC
TCTGAAGGCCGCAAAGACccattttcttctctttatATGTTTTGTGAACT
TCCGCCAGATGTTGTTTTGTATGACTTTGGATGTCAACTGGACGAGTACT
GTCGCAATCGTGAATCTGGCTTCTTTTGTTGCACTCGTTTTTTCCATGAC
ATTTTTCACGGTTATAATCACGTTTGCGGTTCCACCTTTCGATGTGACCG
TTTGAATGGATTCCACGTAATGAACACGNgagccataagggtaccttttc
tcattcctcaaaagtacTGTCGCAATCGTGAATCTGGCTTCTTTTGTTGC
ACTCGTTTTTTCCATGACATTTTTCACGGTTATAATCACGTTTGCGGTTC
CACTTTTCGATGTGACCGTTTGAATGGATTCCACGTAATGAACACGTCAA
TCTGTGAACAATTCAACTCCTTTTTACAATGCATCAAACGCTCCGCCAAA
CTCATGTCGCAAactcattttaatttttatttgcaGTTTTTTATTCATGT
TTGGAACATGAAAAAGCAAACCTCGTTTGAAGCAAAAATTAACATCGCTG
ATTGTTGTGAAGAATAAACACATTGATTATGAACATTCATTTCAACATTG
AATTGAACCATCTCGTATGATGAATGTACTTACACGTTCTGTTTCTTAAG
AACGcgaggcttcgctggccaaattattaagaacaagttaagaatatttt
gaacACAATTTTTGAAGGCTATATAAACTTTacttaaactttatttttgc
tATAATAATTTAACttaatttatagaagtgtatttctcagatctattgac
ctctatgaaacaatcttacagtacatctttacaatttatagattaTAGAG
TTTTTACAGTTAGGGTAGGCACACACTGGGCCTCTAACCCGCTCTTCTTA
TAATCATGTTGTTTCcgtcgtaaatttctttaaatagagtttagtcctag
gacttacctctcactttccatatatgactcttgtctttttattttgctgt
tctttcttttgctttatgATGCCATCGTTTTATTATCTCGCgttctttcc
ttgaaaaatcgtctgaTACTCTGAAATCATCTTTATCTAGTTTGTGGGCT
GTTGCAAGGATTCTAATCCTTTCATCTTCACTCTCGAGACTAACTTTTAA
TGGTCTCCATCGTTCATTTGAATACATTTCATCTTTACGAGCACCTATGC
GTTCTACCTTGATTATCGTCACATCGAAACCCATTTGTTTTTTCAGCATT
CTTTCTATAAAATCTTTGTCATCAACTCGTTGCTCTTCTTCGTTTTCGTT
CTTGTTTTCACCTATATCATGCATCATGATATTGCACTTGGTTGATTTGA
GCCAACGCTCCTCTTCGTTCACTgatttgatgaaactttttaTGGTCGCC
TCTTCTTTTTGTAGATCTTCTTTGGTGACTTCTGcatatgattgtttttt
tgtttctgtgtTGTTGAGCTGTGTTTCAGATCGTTTGTTGTTCCGTTCTT
TGTTGACgtcttttttattcattagcCTCTCGAATTTTCTTTCTAGAGAG
GTTATTCTCTCGTGGAAACCTAATTTCAATCCATGATGTTCATCTTTATC
TGCTTTTTTCGTTGTGATGTTACTGCGAACTTTTTGTCTGCTTGTTTTAA
TCCCCTCAAGTAAGAGTGGCGTTATTGTAACACAATTTCCACATTTGAAG
CGCCGGCTTTTATATTGCAGACAAAGCTGAATCTGATAGGCCGATAGCTC
AGAGCAAGCATAATGGACAAGTCTATCACATCTCCTACATTGTAAGGTGT
CGTTATCTGCTATGATGGTCTTTGTTAAACTGTTATTGGGTGTGCAATAT
CCataattttattgaatttccttgttagaattttcgTTTATTTCCGCCAA
ATTATTGCATTTGCAGGATCGTGGCTGCACAATTTGACACCGTATGAAAA
CTCTTTTAAGGAGAAAGATtcatcaaaaaacattttcattcgtTACATTT
TAAACTTCGTTGATTTCTAATACGTTATTATATTTTTCGTTTTGAAACTT
ACTTGTAACCTTTGAGAACAGCTATTGGAAGCATTACTTGAACTTactta
aatttattttgtaaaCAATAGTATTTTTCTAATTGcttagaaaatgaaat
aaaaccaTATCGGATTCGAG
Run BLAST on NCBI

transcript from alignment at sc0000587:168917..180039+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026773 ID=TCONS_00026773|Name=TCONS_00026773|organism=Clytia hemisphaerica|type=transcript|length=11123bp|location=Sequence derived from alignment at sc0000587:168917..180039+ (Clytia hemisphaerica)
CAGCATTCATCAATTATTTATCCAAGATCAGGTATGATTCAGTTTCCCAC
TCACTCTGTCAGTCATTGATAACATAACAAAATGATGGCAAAAATCCTTT
TCAGTCCTTTTCTAGGTGGACCCTGCCCTTCCTTCCATCTTGGGGAATGT
TAGTCATATTAAGAACCAGCTAAAAAGTTTGTTAAAGATTAAGGGATGCT
CTTTGCTTACAAGCGAAGTAAATTATATAAAGTGCTGGAGTTTTTGGCTG
AATGTCAAATGAAATGTGCCCGTCTATTGAGTGACTACTAGCTAGCAGCA
CAAATACTAATCTCTACAATCTATGTAAATCATTTTTTCTCTATGCAATA
GCTGTGTTGAAAGAGAAAAATCAATTACATGGAATAtatcatttataaaa
aaatttatgttgATAATAATTAGCTCATTCTCATTCAATAGACCGTTGTA
ATTGCCTTACAAGCTACATAAAAAACTATTATTTACTTGAGACTTGACTT
TTAAAGCAAAGAATCTAGCACGATATCTAAAGGGATTAATGAAAACTAAA
TGGTACTTTTTAATacagtaatttttttattataaagcaCTCTGGGCAAT
CTTATTGTATATatatgggctcttccagaaaaatttgtcgacatctgtct
tctaatttcgacacccttctttagagataggaacaatagaaactgaggaa
ggtcagaattgctgattgactttgattagcgcgatgagaggaaaaatctt
tagactatcagtgatttcgaccttcttattattcctatctataaagaagg
atgtcgaaataaGAAGacagatgtcgacattagaccaacttacggtaggg
GGTGGACGCCaggaattttcagataaaaaaagcactcggaaatccagtca
atttttcaaaatgcttCGGAAATTtcactcaattttttatttgaacccTT
GCAAATTTCACATACTgtaatttgtcaaaattttgaaaaaagtatctgaa
attccagatttttctgccaaaaatttgattttgtattggaaatccagGAG
TTTTAATAGATGTATTGGCGAATGCGCCAGTCTTttaaataactaattac
tctacatacattactttccctcagccaataaaaacatgataaattatctt
gtctctaggtaactgttgtggagtaattagttattcaaaagaggGTAGCC
TAAGCCAAAAGCTATtgcttttgtattggaaatccaggaatttcaaaaaa
acattttgcctcAGAATTTTGctgtcgtccacccccctgtaatGGACTTT
AACTGGAATTGAGCCCAAGAACAAATTTTAGCTGTTGGTTGTTTGCATGA
CATTGTTCTCCCAAGAAATGAAATTCCAGAAGGGggctataatttttttt
gcaattttgcaagAAGTTTGatttgagttgttttttttcaagggGTTGGA
TGTTCAAGCATTGTCCACCATATGAAATGATAAACAACAGAAAGTGGCAG
TATCCTATTCATTCAAAAAACGGTTTGTGGTGCCAAAGATATTTATTGAA
TGAGAAATGCATGCAGCAAAGAGGGTGAAATATTGACAACAAGTATTGAG
AAAGCGAAATCTTTACTTCAGAAGAAATAACATCCACCTTTTTTTTCCGT
ATCTTTACTTCAGAAGTATCATTATATATCTTCGTTTTACGTACCAATCA
TTTTAAATCCTATCCCGAGCAAGGAGATAACGATGAGTGAGACAAGAAGA
ATAAAGTAACAGATCAGAAAGGACACTGAGATGAgatgcttttaaaattg
cattgGTGAGATTTATAAGCACCTTTAAAAGCTTAAATAAACTTAACCAT
CACTTAAGGCAACTTTTCAGAAATCGATAGAAAGTGGAGCACCAAATTAT
TCGTTCCCGCTGTCAAGCATGTTatgttggaaaaaatctactGTAATCAA
TTACATTTTTAAGAACACAAGAGATGAAACATTCCAGTGGAAATGCACTT
ACAATTGATGACGtacaaatttttgcaaaatcgaACAAATCAGAGTAACA
TTTATGGCCCTAGAGGCACTTTATATAAAAGTCATTGAACTTTCAATTAA
CATTTAAGACGTGTCATTAGTCATtaatgttattgtttttatagcatttt
tactgtttttaactTATCATTTTGTATCATTTATACCTGATGACTATGTT
AAGACATCAAAATATATTattgtcaaaattaaattttgatcaaagcacca
aaatttcttcaaaagttcacaatattttttaccaaagaGATTAAAATGAT
ATAAATAAGCTTGTTTAATTCCAAGtgtttgaagaaatttttgttatttt
gaaatattcaaggGGGTAAGATAGACATTTTGACAACCACTgcttatttt
ctttaatttagaattttcgttATCTTTCTAGCAAACATAAAAGAGTCTGC
TGGAGTAGTAAATTTTgcttttttaccaattttattttGCTTCTGAATTG
GaagttttcttcttcactttctttGAAGTGTTGGTGTAGGTATTTGAGAT
TGAGTTGAAAATCATATGTCTATGTGTCTGAAAGAAATTTACCATGTTGT
CTCCTccaaaattcttttcatttctAAATTGACTtaattataaaaaacac
aaCTAAAACTTTCCATATTTGGGTCgaacttattttttattttgaaagct
aATTAAAGGGAGTCTGCATATCAATGATTTTTCCAATGACCTTTTCAAGT
TtcattatattgaataaatattctCTTTTAAAAGATGGAACAATCAGAAT
CAGCATCAGCATTTCATAATGTAGACCTTGGTGACCCAGTATCAGATGAA
GAAACCAGTATGTCTTTTTTTTAGCCTTACTTCTCCATGAGCTTTAGTTA
TTATTGAAGCAATACATAGTAGATTCGtttttgaatttccaaaaaaagat
tAGCTGAATATAAAGGCGAAAACAAAACATACATTTGAAGACCTTTGTCA
TTTTAGATCCAATCATTAAGAAAGCGATGAATAATATTGCAATGTCCAGT
GAAGCGATTTCATTATACAAGTCTGCTGTCAAGGTAAAGATATAATGTCT
TAAtcttttttagttatttttaatCAGATATTTTGGCCATATGTGAGCAT
TTTAAGCGTTATATCTAAAATCATTGCTATTTAAATGGCTATCTTTAACG
GTTACTTTAAgtctaaatattttttacacAATATTATAGGAACTAGAAGA
TGCGAAGATACTTGCTCTTAGAAAACCAATGACTAAACTTGAACAGGATT
TTTTGACATTGGCCAGCTATGACATCTGCTCTGGTACTTTCTTTTCTTTG
GCTGTTAAGCTTGCCAGTGGGAAAACCTGTGTTTACTATTTTGAATCCGG
AAATTTTCATGGTTTTATGGATGATGTGGGCTTGATAAAACTGCAAAAAA
TCTACGGGGAGATCCACATACCGATATGCTGCTATTCAGCCCAAGATATA
ATATTGAAGCGCAAAAGAAACATGAGTATGTTCCAAAACAAAAGATCAAA
AGGTATAGTTTAAGCCTCGTATGTTATCTGAGTAGATAGCTGAGTATTTT
AGTCCTTAATCCTGCTTAATCTTGTTGTTTTTCAAATTAAGCCTATTGGT
TATTGCTTCTCCAATCTGAATTATCAAATACTATCAACTAGAATTTCTTA
GTTTATCAAGTCCTGAATCATTAGCCCGCGGTTGATAGTTGATATTAAAG
CTATTCTTTTTACTTTACCCATTTAGACATTGACGTAAACATCTCACTTG
ATACTTGACATGACATTACTGATAACAAACAAGACATGACGAGAGTGGGA
AACGTATGTACAACCTATGACGCTTCTTAATTACACTGATAAACTCCAAC
TTCGTTTTGAACTTGTTTTTCCTTTACGATTATCTTAAGATCATCCCAGG
TATGATGCGTTCAAAAGAAAAGTCTACGATGATAAAGATTCAATTGACCA
ATGTCTGAAAGTTTTGGCTGACAGCCTTTGGCAACAAGATGGCATCAAGA
TGCTTGGAGTCTTTGCTCTTTGTCTGAGAAAAGAACAGAAATGGAGAGAC
GTTCGTGATGAAAAAGATCGAAGTTCACAAAGGTTTCTTTACGATGAGGA
TTATTatgttgaaaacaaaacacttttagaattctttttcaTTAATGTTT
ACCTGATGAGTGTGAAAGATATTATTGTTAACTTCCCCCTCATATTTCAT
ATTTGATTAATTGTACTATAAGCCTTTGTTTGCAAGTGCGATATTCTCTA
TTTCATTGATAATCATTGATAATCATTCACAGGGATACAAGATTATAAGC
TCCATTAAGCTAATCACGCGATTCATAATAATCGTTGCACCTACGCTTTG
TTTAGGTATTGTNGCTAATCACACGATTCATAATATTCGTTGCACCTACG
CTTTGTTTAGGTATTGCTTCAGCTTCCCGAAAGAACATCAATCTGAACTT
GAGTCCTCATTGACAGACTTTAGACCTTCCTTCAACCATAAACTGATATG
GAATGACATTGAGACTCCAAGCATCAGTCAACAATTTGCTGTCGTGAACT
CTCTGCCCAACTTCCATTATTATTCTTGGGATGGGAAACCTGTCAAAGTG
GTTCGGTATCAAGATCGCTTACCATCTGCATCCAAACCAAAATCACCAAG
AAATATAATTATCAAGGCGTTTGAAAATGCAGACTGCGCTGGTTATGTCA
TTTCGTCAACAATATCACATATCACTGGTCACCCCACTGATTTACCGCAT
GTTATCTCTCAAAcaagcaagagaagaaaggtTTTTAATTTAGAATTAGC
TTTTTACTGATTTCTCATATTGATTTTTGCTGTAGTTATGTAACAACTGA
TTTAAAAGAATGATCCCATTTTAATAATAATTGCACATTTTGGAGTACAC
TTGGCGATGAATCAAGATTAATGAggagaaaatttgaatttcttcaagTT
CGTTAATTTGTGTGCGAGTTTATTGATATCTCTAACCATCAATTTCATTT
AGGTAGCCAAATCTTTCCTGGAGAATAATGAAAACTCACGAGAAGGATCC
ACTCGACAAGTaatgattttaattttcctAAATCAGACTCTGGCTGTAAA
ATGCTTCTGTTTCGAAGCTAACTATGTGCTAGAAAAAGTCGATCATTTAC
AAGATTGATAAAGCacttttttcattaattttttaggAAGCACATCCAAG
TCATGCTCATTTAGAGGATTCTTCAGTTGATTCCTCCGATCAAATGGAAG
TACGtcattttaattcttttgatgTTTTGGGGAGTTGCGTTGGGGAGTGT
TGAGTTTGTCGGTTCACTTAAGTTTAACGCTAtgttttaattgaaaatca
tTTGTTACTCTCAGAGCCAAACGTTTGAAGATGGATggaatgaaaatgaa
gataCTGAAATAGCACATACACCTaccaaagaagaaaattttgtaTGATC
TTTTGTTTTACCGAAGTTATGAGTAATAATGTCCTTTTTAGCATTACTTa
gttcaaattttttaattctgttcGTTAAGGAAAATGTAATCTCTTCATCG
TAATCTTTTGATTGTCTTACTTTGTTTTTAGCTCCAGCTCGAACAAGCAT
CACCCCGTGTAACTTCTCTCTTCAAATTTTATTGCTCGGAATTGATTAAT
CGTGGATCCATTTTCTGGAGAGTTCTTACAGATCGTCAGCAAGTTGTTTG
CATGAACGCTTTTCATGAAAAAACCGGAAACTTCTTGGTAAAAATGTCTT
CTTTTGAATTTCTGTCGCTTTTTGTGATATTTATTCATGAAAAGTTAGAT
TTGTGGAATCTGCACTTATTAGTTATATCTATTTTTCGATGCTAGATTTA
CTACGCAGCAACCTGGTAAACCTGGAATACAAGCCTTTTGAACCGACTTG
TTGACAAAACCTTTCGCAAGTAAAAAGTGCATCGTCCTTTTAGCCATAAC
CCCAAAGAAGATTTTTCCGTCCACATCGAGTAGAGATATAAGTCGAATCT
GGTCAAGTGTGAATCTTGTTCTTCCGGTATGTAAACACCTTCTGCCGTTG
TCCATCGTTTGGGGAGGACTTTTTCTTTCCAAGTCCTGTGCAAAAGAAGG
AAGAGTTTGTTTAAGAAGGCTTTGTAGTTATTTGTATATAATCACTTTGT
CTCTTTCTAGCCCAAAGAATTTGTTCACGTCACCTTTACAAATTTCGACG
ACGGGTCACTGCACATGTCATGCACCTGTCAAACATCAACGCTGACAACA
GGTTTTTCTGTTGGCAAGAAGTCTACTTCAAAAGTCTGCCTCCATAAAAG
acttatcaaaaatataaacaactccgaTGACAAAATCATTGACGATGCAA
TAGTGGCAGAAGGCAAAACTCGAGTCGAAGATAAAGTTGTTATGCTGCGT
AGTAAATCTGGCATCGAAAAATACTCCGTTGTAGGTTCTGATGGTTCGGT
GTCCTTCGTTCACGTAACTGCTAATCTTGGTCGTCTGATGGTCAGTTGTC
AATCAGGATCGTGTAACTTTGGCCAAGGTGGTAAAAGTCGGAAGCTTTCG
TCTCTTTCATCTCCCGAATGCGGATGTGTTCATTTAAAGGAATTCAGACG
CTTTCGAGAGATTCCTGCTGATGAACCAGACGATGAATTAAAAGACTTTA
CAGAATTTGTTATCCCGACAGAAAAAGTGAGTAGttcaatacacaggttg
caaaaaataaattttgaagtcAAATCACACTTTTACTCGAAACTTTAATG
AACTTTACGACATGacctttatttctgattggttcgaatttattgagact
aataaagttatcagggGCTATCAGGACGTGGcaaattaattttgtttttc
aacaaCCTGAAAAGAGTTGGACGTTTTCATTGGGCTAACGGGCTACTAAG
GTTCNcaaattgattttgtttttcagtAACCTGAAAAGAGTTGAACGTTT
TCATTGGGATAATGGGCTACTAAGGTTGATTgtttttcatattatttttt
caataaatttcttgTTTCTTATCATAAAGTTGGAAGAAGTATTCGATGTC
GAAAGTGGTTTATGGACCTTCCACAAAAATTCGCCGAGCAAAATAAATGT
CAGCTCTGACAGCACGTGTgaaacattgaaaaagaatttcaaagcaAGAA
TAATTCCTGAAACTGGCTCCTTGTATCAGTCCAACTCAGAAAAGTGTTCG
TGTGGGGTAGGTAATAGTTTTTAAGCGTATATGCTTTTTGTATGATTGCC
ATTTAGCGTGTAGAAACACTTAGATCGCTGAATTTCCTGGTTCTCGTTAT
GAAATCAATTTCAAATCATTACTCATAGAATTATTGGCAAAAGAAGAAGC
GTACTTCCACGTTATACTCGATGATGAGTGCATGTGACATCGAGGTCATC
GAAAAATACTGCGTTTGTGGTAAACGAGAAGAATGGGATGGTGCTGAGCA
CTCTATATATCGGTCAACGCGTTCCACGTGTGCTGGGTATGAGCTAGGTA
TGAACTTGTTGGTTAAAGGCGTCATTAAACGGTCTCGTACTAATGTGCTT
AATTGTGATGTATTAAACACGATTTTATAGaagatatatctttcattaTC
GGTTTTATGGTTCCCTAAATGTTTACTCCCTTTTATTTAGGTTGGCAGTT
CGTAAACACGGTACTTGATAGTGGAACattcagtggtttcatttcaaaaa
tgaccTACAACTACGAGCTTTCATCCTCTCCACGTCCGTTCATGTCGCTT
CAAACGTTCATCAAGTGGTTTTTTGGATGGGCTTCTGCAATGAACATTGA
TTTTCGGATGGGTTGTAAAGGCTGCGGTGAGAATCCCAAGGTAAAGATCC
AAAACTAtctgttttttgttgtttagacACGCTGCACAAATAATATAACC
AAAAGTGTTGCCTTCAATATTGATGTGGAAATTTACTGTAACCTAACTTC
TGATTCacaatttctttatttcttaggtATTGGCATGTGACGGAACCAAA
ATTGGTACTAACTTTAAAAACGTGTTTGTCACTCCGATTGAGAAGCCAAG
TTATGACCATCCCACGGAGACTCTTGGTGCTATGGATCGCTGCCCGTTGA
AAAACCAATTAGCAAGAACAGCATTTGCAGAATTAGTTGATCAGGATACG
ACTGAGCACTTTGAGGCCATCCCTGACGAGTTAAAACCTTTTGCTTCTCA
AAGAAATGAAACAGATGTTGACCATCTTAAAAAGGCTTACTCCAATGTTT
ACAAACAACTGTCAAGAACATCTTCCGTCGACACAATTATTNAGGCCATC
CCTGACGAGTTAAAACCTTTTGCTTCTCAAAGAAATGAAACAGATGTTGA
CCATCTTAAAAAGGCTTACTCCAATGTTTACAAACAACTGTCAAGAACGT
CTTCCGTCGACACAATTATACCTTTTGAGATTGTCGAGTTTTGTCTGCAA
GCCTCAGAGTTTGCACTTCTTGGGCTTTCATCGTTATCGAAAGTGCATGA
GCTCATTTCGTTGTTTACTTCATATAACATGGAGATTGCTACTTTAATCA
GGAGCTCCTTGACCGTCCACAAGTCTCCCACAAGAGATATTTTTGACATG
ATACGTTACTGCTGCAACAAATGTAAAGAAGTTCACGCACATGACGTAAA
ACCTGAAGGTGCAAATCCTATTTCTGGTACATACAACCCTCCACGCGATG
GTAGGGCTTACTATTTTAGCAACCATGGACAACAGATCCGGAAAATAAGA
TCTTTCCCAATTGATAAGCGGAATCAGGCATCAAAACCATCAACTGAATG
CAGTAAGAAATTTCCTGTTGTCAGCAAAACTGGCACAAGCTATCTGTTTG
CCTGGTTCTGCCCCTTACATGGCCATTGCTATGGTTACCACGTTATCCCC
TTCTCTGAAGGCCGCAAAGACccattttcttctctttatATGTTTTGTGA
ACTTCCGCCAGATGTTGTTTTGTATGACTTTGGATGTCAACTGGACGAGT
ACTGTCGCAATCGTGAATCTGGCTTCTTTTGTTGCACTCGTTTTTTCCAT
GACATTTTTCACGGTTATAATCACGTTTGCGGTTCCACCTTTCGATGTGA
CCGTTTGAATGGATTCCACGTAATGAACACGNgagccataagggtacctt
ttctcattcctcaaaagtacTGTCGCAATCGTGAATCTGGCTTCTTTTGT
TGCACTCGTTTTTTCCATGACATTTTTCACGGTTATAATCACGTTTGCGG
TTCCACTTTTCGATGTGACCGTTTGAATGGATTCCACGTAATGAACACGT
CAATCTGTGAACAATTCAACTCCTTTTTACAATGCATCAAACGCTCCGCC
AAACTCATGTCGCAAactcattttaatttttatttgcaGTTTTTTATTCA
TGTTTGGAACATGAAAAAGCAAACCTCGTTTGAAGCAAAAATTAACATCG
CTGATTGTTGTGAAGAATAAACACATTGATTATGAACATTCATTTCAACA
TTGAATTGAACCATCTCGTATGATGAATGTACTTACACGTTCTGTTTCTT
AAGAACGcgaggcttcgctggccaaattattaagaacaagttaagaatat
tttgaacACAATTTTTGAAGGCTATATAAACTTTacttaaactttatttt
tgctATAATAATTTAACttaatttatagaagtgtatttctcagatctatt
gacctctatgaaacaatcttacagtacatctttacaatttatagattaTA
GAGTTTTTACAGTTAGGGTAGGCACACACTGGGCCTCTAACCCGCTCTTC
TTATAATCATGTTGTTTCcgtcgtaaatttctttaaatagagtttagtcc
taggacttacctctcactttccatatatgactcttgtctttttattttgc
tgttctttcttttgctttatgATGCCATCGTTTTATTATCTCGCgttctt
tccttgaaaaatcgtctgaTACTCTGAAATCATCTTTATCTAGTTTGTGG
GCTGTTGCAAGGATTCTAATCCTTTCATCTTCACTCTCGAGACTAACTTT
TAATGGTCTCCATCGTTCATTTGAATACATTTCATCTTTACGAGCACCTA
TGCGTTCTACCTTGATTATCGTCACATCGAAACCCATTTGTTTTTTCAGC
ATTCTTTCTATAAAATCTTTGTCATCAACTCGTTGCTCTTCTTCGTTTTC
GTTCTTGTTTTCACCTATATCATGCATCATGATATTGCACTTGGTTGATT
TGAGCCAACGCTCCTCTTCGTTCACTgatttgatgaaactttttaTGGTC
GCCTCTTCTTTTTGTAGATCTTCTTTGGTGACTTCTGcatatgattgttt
ttttgtttctgtgtTGTTGAGCTGTGTTTCAGATCGTTTGTTGTTCCGTT
CTTTGTTGACgtcttttttattcattagcCTCTCGAATTTTCTTTCTAGA
GAGGTTATTCTCTCGTGGAAACCTAATTTCAATCCATGATGTTCATCTTT
ATCTGCTTTTTTCGTTGTGATGTTACTGCGAACTTTTTGTCTGCTTGTTT
TAATCCCCTCAAGTAAGAGTGGCGTTATTGTAACACAATTTCCACATTTG
AAGCGCCGGCTTTTATATTGCAGACAAAGCTGAATCTGATAGGCCGATAG
CTCAGAGCAAGCATAATGGACAAGTCTATCACATCTCCTACATTGTAAGG
TGTCGTTATCTGCTATGATGGTCTTTGTTAAACTGTTATTGGGTGTGCAA
TATCCataattttattgaatttccttgttagaattttcgTTTATTTCCGC
CAAATTATTGCATTTGCAGGATCGTGGCTGCACAATTTGACACCGTATGA
AAACTCTTTTAAGGAGAAAGATtcatcaaaaaacattttcattcgtTACA
TTTTAAACTTCGTTGATTTCTAATACGTTATTATATTTTTCGTTTTGAAA
CTTACTTGTAACCTTTGAGAACAGCTATTGGAAGCATTACTTGAACTTac
ttaaatttattttgtaaaCAATAGTATTTTTCTAATTGcttagaaaatga
aataaaaccaTATCGGATTCGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015042XLOC_015042Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026773-exon-sc0000587-1491911889:168917..168947TCONS_00026773-exon-sc0000587-1491911889:168917..168947Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:168917..168947TCONS_00026773-exon-sc0000587-1510915933:168917..168947Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:168917..168947TCONS_00026773-exon-sc0000587-1575043694:168917..168947Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:171701..171773TCONS_00026773-exon-sc0000587-1491911889:171701..171773Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:171701..171773TCONS_00026773-exon-sc0000587-1510915933:171701..171773Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:171701..171773TCONS_00026773-exon-sc0000587-1575043694:171701..171773Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:171923..171999TCONS_00026773-exon-sc0000587-1491911889:171923..171999Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:171923..171999TCONS_00026773-exon-sc0000587-1510915933:171923..171999Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:171923..171999TCONS_00026773-exon-sc0000587-1575043694:171923..171999Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:172156..172468TCONS_00026773-exon-sc0000587-1491911889:172156..172468Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:172156..172468TCONS_00026773-exon-sc0000587-1510915933:172156..172468Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:172156..172468TCONS_00026773-exon-sc0000587-1575043694:172156..172468Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:172856..173048TCONS_00026773-exon-sc0000587-1491911889:172856..173048Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:172856..173048TCONS_00026773-exon-sc0000587-1510915933:172856..173048Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:172856..173048TCONS_00026773-exon-sc0000587-1575043694:172856..173048Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:173377..173746TCONS_00026773-exon-sc0000587-1491911889:173377..173746Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:173377..173746TCONS_00026773-exon-sc0000587-1510915933:173377..173746Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:173377..173746TCONS_00026773-exon-sc0000587-1575043694:173377..173746Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:173969..174025TCONS_00026773-exon-sc0000587-1491911889:173969..174025Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:173969..174025TCONS_00026773-exon-sc0000587-1510915933:173969..174025Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:173969..174025TCONS_00026773-exon-sc0000587-1575043694:173969..174025Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:174153..174215TCONS_00026773-exon-sc0000587-1491911889:174153..174215Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:174153..174215TCONS_00026773-exon-sc0000587-1510915933:174153..174215Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:174153..174215TCONS_00026773-exon-sc0000587-1575043694:174153..174215Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:174331..174408TCONS_00026773-exon-sc0000587-1491911889:174331..174408Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:174331..174408TCONS_00026773-exon-sc0000587-1510915933:174331..174408Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:174331..174408TCONS_00026773-exon-sc0000587-1575043694:174331..174408Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:174548..174703TCONS_00026773-exon-sc0000587-1491911889:174548..174703Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:174548..174703TCONS_00026773-exon-sc0000587-1510915933:174548..174703Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:174548..174703TCONS_00026773-exon-sc0000587-1575043694:174548..174703Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:175127..175642TCONS_00026773-exon-sc0000587-1491911889:175127..175642Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:175127..175642TCONS_00026773-exon-sc0000587-1510915933:175127..175642Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:175127..175642TCONS_00026773-exon-sc0000587-1575043694:175127..175642Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:175996..176172TCONS_00026773-exon-sc0000587-1491911889:175996..176172Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:175996..176172TCONS_00026773-exon-sc0000587-1510915933:175996..176172Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:175996..176172TCONS_00026773-exon-sc0000587-1575043694:175996..176172Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:176295..176463TCONS_00026773-exon-sc0000587-1491911889:176295..176463Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:176295..176463TCONS_00026773-exon-sc0000587-1510915933:176295..176463Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:176295..176463TCONS_00026773-exon-sc0000587-1575043694:176295..176463Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:176607..176806TCONS_00026773-exon-sc0000587-1491911889:176607..176806Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:176607..176806TCONS_00026773-exon-sc0000587-1510915933:176607..176806Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:176607..176806TCONS_00026773-exon-sc0000587-1575043694:176607..176806Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1491911889:176943..180039TCONS_00026773-exon-sc0000587-1491911889:176943..180039Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1510915933:176943..180039TCONS_00026773-exon-sc0000587-1510915933:176943..180039Clytia hemisphaericaexon
TCONS_00026773-exon-sc0000587-1575043694:176943..180039TCONS_00026773-exon-sc0000587-1575043694:176943..180039Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000587supercontigsc0000587:168917..180039 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0386742	0.167704	0.210599	0	0	0	1.72745	1.52915	0.024294	0	0.550775	0.620769	0.835851	1.29867	0.345499	0.527356	0.784978	0.712122	1.86144e-09	0.850596	0	0	0.650843	0.390073	1.02921	1.25169	2.06073e-10	3.55877e-08	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026773 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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