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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026864 ID=TCONS_00026864|Name=TCONS_00026864|organism=Clytia hemisphaerica|type=transcript|length=1706bp
ATTTTCTAAACAAATTGATTGTATCAGACGAAGCCATTTTTAGTTTAAAT
TCTGAAGTAAACACTAGAAACGTGATAAATTACGCACCATTTGGTCAAGG
TCACCCTGAAGACCACTATGTTGAGTTTGAGCAAGGTCCCGATAAGATAA
TGGTTTGGGTTGGTGTGATGAGAAATGGGACAATATTTGGTCCTCATGTT
GTACGTGGCAAGCTCGATACACGTGAATACCTCAGGATCGTCAGGTTCAA
CGTTGTCCatgtaaaaatgaagaagattaCCTTTCTTCAGGGTGCGGTGG
TCTTCACCAACTGTTAGTTCTTGTCACGATCAGTATCATCAGTTATTGTC
AGTAAGTCTTAACACGAATTAACACAACAGGTAAATGTACAGTTCATTCA
TTCACATAAATTAAAGCTCCTCCACAGCTGTTATTATTTGTTATCAATTA
TTATTATGTCTGTAACGAAACAATGGATGATTAACAGTCCAACGAGAGTT
TCAAAGGCACGGGGTCAACCAAAGAAATGTATGGTGGCAACAAGATGGAG
CTCCCGCTCATACCAGCAATCGGTCATTGAGATATCTACAAGGTCAATTT
CCTGGACGCGTCATGAGTAAGGGAGGTGATTGGGATTGGCATGCTCGATC
TCCAGACTTGGCAATATGCGACTTCTTTCTCTGGGGCCATTTGAAGCAAA
TGATTTGGGACGTTCCTGTACAAAACCAACCCCAAACCCTCAACGAGCTC
GAGAATCGACTCAGACAAGCTTGTAATAATCTTAATCCTGTCTTTATCAG
AAAAGCTTTTGACGGTATGGTTACACGCGCTAGGAAATGTATTGCTGTCG
GTGGTGGCTCTTTTCCTAATGAATGATGTTCAAACTTTATAAATTATTGA
TATTTTCCAGAGCTCAATGAAAATAAGGGGTTTGAAACATCTTTTATTCG
CTcgagtttttgaaatatttttgaaaaaaccgtggattgttttactaaaa
taaattcaCGTGGAATCATATAGCCGCGTAAGGTTCACGTAAGGCCACAC
TCAGATTTTGGTAATTCTCCGAACGATTTCCAAAATCCTTTTGAAAATTA
CTTCTagctaaaaaataatccttCTCCACTTCTCAAAGGTAAAAAACTTT
ACCTTGCTGCCTTCTTTCTAGTCCTCTTGGTCAAAAACATAGAGACAACA
GTAGTCAAAcctaaatcaatttttttatgtatTCTTGCTAGTATATCTGT
GCTTTTAATCTGGAGCTAAACAGAATCAAAGCAATTCACTCTTCAGATGC
CTTTGTAGAAAAAATGACTGCTTGACCCTTTTTACCTGCAGTTGAACGAA
GTTTAAGAAATTTGCTTTCATAGGGGTTTGACCAGATAATCACCAATTGT
TAATCAATCTCCCTATCTATCCTTTGTCAGAAAAGACTCCCCCTTCCACC
AAAACCTACAAAGCTACGGCTAGCTAGCTAGTACCCCAAAGATTGTGTAA
ATAATAAGAATCACTCTTAATACAGCTTAAAAATTCCAATAAATAATGTG
TGACAAACCTTTTTGAAGAAACCTGTGTCatagaaaaataccaaaatcta
CTGCTTTGCATGATTGCTCTCTGTTGAGTGGCTGCTACTGCTGGATTAGA
AAACCATCGCTTGAAGAGGTGTTAAACGAGTATAAAATATTCAATACTTG
TAAAAA Run BLAST on NCBI transcript from alignment at sc0000591:203884..205589 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026864 ID=TCONS_00026864|Name=TCONS_00026864|organism=Clytia hemisphaerica|type=transcript|length=1706bp|location=Sequence derived from alignment at sc0000591:203884..205589 (Clytia hemisphaerica)
TTTTTACAAGTATTGAATATTTTATACTCGTTTAACACCTCTTCAAGCGA
TGGTTTTCTAATCCAGCAGTAGCAGCCACTCAACAGAGAGCAATCATGCA
AAGCAGtagattttggtatttttctatGACACAGGTTTCTTCAAAAAGGT
TTGTCACACATTATTTATTGGAATTTTTAAGCTGTATTAAGAGTGATTCT
TATTATTTACACAATCTTTGGGGTACTAGCTAGCTAGCCGTAGCTTTGTA
GGTTTTGGTGGAAGGGGGAGTCTTTTCTGACAAAGGATAGATAGGGAGAT
TGATTAACAATTGGTGATTATCTGGTCAAACCCCTATGAAAGCAAATTTC
TTAAACTTCGTTCAACTGCAGGTAAAAAGGGTCAAGCAGTCATTTTTTCT
ACAAAGGCATCTGAAGAGTGAATTGCTTTGATTCTGTTTAGCTCCAGATT
AAAAGCACAGATATACTAGCAAGAatacataaaaaaattgatttaggTTT
GACTACTGTTGTCTCTATGTTTTTGACCAAGAGGACTAGAAAGAAGGCAG
CAAGGTAAAGTTTTTTACCTTTGAGAAGTGGAGaaggattattttttagc
tAGAAGTAATTTTCAAAAGGATTTTGGAAATCGTTCGGAGAATTACCAAA
ATCTGAGTGTGGCCTTACGTGAACCTTACGCGGCTATATGATTCCACGtg
aatttattttagtaaaacaatccacggttttttcaaaaatatttcaaaaa
ctcgAGCGAATAAAAGATGTTTCAAACCCCTTATTTTCATTGAGCTCTGG
AAAATATCAATAATTTATAAAGTTTGAACATCATTCATTAGGAAAAGAGC
CACCACCGACAGCAATACATTTCCTAGCGCGTGTAACCATACCGTCAAAA
GCTTTTCTGATAAAGACAGGATTAAGATTATTACAAGCTTGTCTGAGTCG
ATTCTCGAGCTCGTTGAGGGTTTGGGGTTGGTTTTGTACAGGAACGTCCC
AAATCATTTGCTTCAAATGGCCCCAGAGAAAGAAGTCGCATATTGCCAAG
TCTGGAGATCGAGCATGCCAATCCCAATCACCTCCCTTACTCATGACGCG
TCCAGGAAATTGACCTTGTAGATATCTCAATGACCGATTGCTGGTATGAG
CGGGAGCTCCATCTTGTTGCCACCATACATTTCTTTGGTTGACCCCGTGC
CTTTGAAACTCTCGTTGGACTGTTAATCATCCATTGTTTCGTTACAGACA
TAATAATAATTGATAACAAATAATAACAGCTGTGGAGGAGCTTTAATTTA
TGTGAATGAATGAACTGTACATTTACCTGTTGTGTTAATTCGTGTTAAGA
CTTACTGACAATAACTGATGATACTGATCGTGACAAGAACTAACAGTTGG
TGAAGACCACCGCACCCTGAAGAAAGGtaatcttcttcatttttacatGG
ACAACGTTGAACCTGACGATCCTGAGGTATTCACGTGTATCGAGCTTGCC
ACGTACAACATGAGGACCAAATATTGTCCCATTTCTCATCACACCAACCC
AAACCATTATCTTATCGGGACCTTGCTCAAACTCAACATAGTGGTCTTCA
GGGTGACCTTGACCAAATGGTGCGTAATTTATCACGTTTCTAGTGTTTAC
TTCAGAATTTAAACTAAAAATGGCTTCGTCTGATACAATCAATTTGTTTA
GAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026864-exon-sc0000591-1491911889:203884..205589 | TCONS_00026864-exon-sc0000591-1491911889:203884..205589 | Clytia hemisphaerica | exon |
| TCONS_00026864-exon-sc0000591-1510915933:203884..205589 | TCONS_00026864-exon-sc0000591-1510915933:203884..205589 | Clytia hemisphaerica | exon |
| TCONS_00026864-exon-sc0000591-1575043694:203884..205589 | TCONS_00026864-exon-sc0000591-1575043694:203884..205589 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000591 | supercontig | sc0000591:203884..205589 . |
Blast
The following BLAST results are available for this feature:
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