TCONS_00026922 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026922
Unique NameTCONS_00026922
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1919

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026922 ID=TCONS_00026922|Name=TCONS_00026922|organism=Clytia hemisphaerica|type=transcript|length=1919bp
tttagccTGGGTACGAACCGCAACAAGGCGAAGAACCAGTAGAGATAGTC
TTCACTGTGGATGATACCATTCGTGATTACATCAAAGAAGCTGTCCATCT
ACACGGCCTCATCTCTTCATCTCTTGGATTGATTGACAAACCGATCGAAC
ATTACGGAAAAGCTTTCGCAAAGACTGTTCGTATAAACCCAGATACGGTC
TTTCAAATGGCCATGCAACTGGCTTACTACTCTCTCAATAAAAGCGTTTG
TCCGACTTACGAATCAGGGACTACCCGTATGTTTTACCACGGACGAACGG
AAACAAACCGGTCATGCACTGTAGAGTCTAAAGAATGGTGTGAGGCTATG
TTCAATAACCAAAAGACGGGACCAGAACGCTTGGAATTATTCAGAAAGGC
GGTGCAGAAGCACGATACTTTGATGTTGGATGCATGCCAGGGCAAAGGTA
TCGACAGACATTTGTTCCTCTTGAAGAAGATCAGCGAAGAAGAAGGGATA
CCGCTTCCAGATATCTACATTGACAAAGCATACAAAGCAAGTGGTGGCGA
TGGGAACTTTGTGATTTCATCCAGTTTGACAGGTTTCACAGTGTTGCATG
GTGGTATGGCGCCAATGGTGGAAGATGGTTATGGAATCTTCTACTCCATT
AATAAAGACAGAACTCAGGTTGTTTTATCTTCATGGAAAACTTCACAGAA
GACTGATCACTTGAAAATGTACGATGCTATTGTCTCATCATTGGACAAGA
TCAAAGAGCTCTGTCAACTCTCCAAAATGTAGAATGCTTTTAGCGATGGT
AGAACGTCCTTTTTGGGCTAGCATCAATACTGGTCAGTATTGGtatgaag
atttttagttttaaTATTGTAAATTATCATTGAACACTAATTAAGATAGC
TCATAATCAATGATTAATGATTAGAACTAGTTACTcttgggtgcctaata
aacgcccctcccgtccacccgcttattaatttttcaatttattttaacCC
TCGGGCCTTGATATTTTACAATTTGGTCCCCCTTTTATTAGTCACCTGAG
AGTATGATTATGCATCAAGGACatactttcttcattttctgCTTCAATCA
CTTCTTTGAACTTACCACTATATAAACCATGCATTTATCTTCTTCCAAAC
ATTTATCAATACTATTCCACACATGCGCACTACGTATATTTTTACTAACC
TGTTTATATTGTTCATAATTCACTCATTTTATCACAACTTTCTACGCATG
CGTTTTCAAATTCATATTCAGTTCTATGTTCAGTTatatcacacccctgt
ctcactgatgACCCGTTGAGAATTTTTCACcgtttgtaaattttcttttg
tccAAATATGGAGTATGTatcaaagttgaaattttggtgatttttataGT
ATTTCATCCTAACCTTGATGCACAATGCTGGACTCTTTTGCACTTTGAGT
ACTCTACATTCAACACTATGTAACTTTTTCAGGCTAAAATGCAATAATTA
GTTAGTACTTCCTAACCAATACATGTATAATCAATGGAAGCATATTTTAT
TACACATATTATTACGATATTATTATCATACAGAGGAAACCCAATAGAGC
TATAATAGCATAAACCAGTCAAAATCTTTAGAATAAAGTAATGAAACCAA
ACCATATTGTGTTTAACCGATCAATTTTTAAGAAGCAAATGTGATCTTTG
GTGTTTTATTTGGATAATGTGATAAAAACCTTGCATTCTTAAAACCTTTG
TAGAAActttatggatttttttcaattttttgaaaacattttcaaaaatt
ttaagatttagaattttttttttgtgtaaatAATTTTGGAtcatattttt
tctaacaggacattttattagattttgaagATAATTGAACATAATTTTTG
AATTCAACAAGGCACCAAT
Run BLAST on NCBI

transcript from alignment at sc0000596:129867..143396-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026922 ID=TCONS_00026922|Name=TCONS_00026922|organism=Clytia hemisphaerica|type=transcript|length=13530bp|location=Sequence derived from alignment at sc0000596:129867..143396- (Clytia hemisphaerica)
TTTAGCCTGGGTACGAACCGCAACAAGGCGAAGAACCAGTAGAGATAGTC
TTCACTGTGGATGATACCATTCGTGATTACATCAAAGAAGCTGTCCATCT
ACACGGCCTCATCGTATGTTCTCTTTATAGGAATATCAGTCTCGACTTTT
GCCACAATCTTAGAGCAAATTAATGCTGATTTAAAGGCCTTTTTGACAAA
TAAATCAATAAATTTAAAGCTCTTTGAGAACTTTTTAGGAGCATCTTAAG
CCTAAAAATCATACAAGGATCAAAATATTACACACAAAAAACTGGTTTTT
ATGGAAAGGCCTGTATTTCCTATGATCTATTACGGTTGATAAAGTTTTGT
TCTAATAATTTAATTTCTGTGCTATCAATGAAAAAAAAAACACAAAATAA
TTTCTTCACAGCTTTTGACACTTGCACTTGTTTATTTGTTTTTTTATCTC
AATTAAGAGTATTGTTTTTCGCACCTTTTGTTTTCTTTCTAGTCTTCATC
TCTTGGATTGATTGACAAACCGATCGAACATTACGGAAAAGCTTTCGCAA
AGACTGTTCGTATAAACCCAGATACGGTCTTTCAAATGGCCATGCAACTG
GCTTACTACTCTCTCAATAAAAGGTATGTCATCTTTTGCGTATGTTATGA
TTCTTTGGTTGAAACTGGATCAGAAAACTTTTCCTGGATTCAACACCTCT
ACTTTTAAAAATTGTTTTTAGAGCCTTTCAAGTCCTCTTTAAATTTCATA
GTACCTCTCCTATAATTTTCATTTATATCAAACCAATCAGATTTATGAGT
AGACTTCAACCTGCTTGCCTGATTTAGGTATATCATTTTAGTCTTGATAA
CAGTAAACTATCGAAACCCAAAGAAAACAAAAATGAGTGCTTTTTTTTGT
TTATATCTTATTTTAGCGTTTGTCCGACTTACGAATCAGGGACTACCCGT
ATGTTTTACCACGGACGAACGGAAACAAACCGGTCATGCACTGTAGAGTC
TAAAGAATGGTGTGAGGCTATGTTCAATAACCAAAAGACGGTAAGTGCAA
AGAGGAAAAAAAATCTTTCGAAAGAGTAAATTTAAGCTTCTTAGCTAGGT
AATTTTACTTGTGGTTTTCACTTGTGGTTTTCACTTGTGGTTTTCACTTT
TAAATTTTGTCATGTATTTTCATTACTATTTATATATTCGATTGCTTGAG
TTGCACTTATATTATAACCTTGGATACACTGGGTGACGATAGTCGGCCTT
TAATGTGCCGCATCCCTAGTCGGGTTCAACTAACCTGTGCGTAAACTTGA
AAATATTTCTGTTGGACCCGCGAATCCCCAAAGACGAGGGCGGAGGTCCA
GGCATCCCGCTGCAAAATTTCACGCTGTCTTGCGAAATTCCATAATGTAA
ACCTTGCAGATGTTGAAAGTTTTCCTGACCGTCAGAGCTTTAGCGTGTCG
GATGAAAATTTCTGCATCTGGGTGCCAGATAAGGTTCAAACTGAATCTGA
AATGGGAATACAACCACGTACATTGACTTAAACATTATTCTAGGCAATTA
ATTGTCTTAATGACAACCTATTAAATAGTATGTGAAATTTCCAAACGAGT
AACCTCAGTGCTAACAGCCAAATGATATCGTTTTGGAGAAATGTTTCTCA
AATCCTTTATTTCAACTTGGAAAAAACTCTAGGACTTAAAATTTAGGATT
GTACGAAGAAGCGTTTCATTAAAGCTTTCAAGTAAGATTTTCATGCTTTT
AAAGGGACCAGAACGCTTGGAATTATTCAGAAAGGCGGTGCAGAAGCACG
ATACTTTGATGTTGGATGCATGCCAGGGCAAAGGTAGGTGCTTAAGCCAA
TGAGACAAAACCATCTTGTGAGAACTCGTTATAACATCTGGTATTAATAT
CCCCTCAGTTTCAAATTTTGTAATTTTCATTATATCTATATGATAATAGC
CGTACTTATTTAGAAATATTTCCAATTAGCCCGAATGTATTGAGGGTTGC
TTTCAATAAATCACCTTCCAAATTGCCCAGTTTGAGAGAGACATTTTTTT
TAAAGTGACTGCTTCTGCTACTGAAGTAAAGAAAGCTACTACTTTTTCTT
TTTTTCCTATCAGGTATCGACAGACATTTGTTCCTCTTGAAGAAGATCAG
CGAAGAAGAAGGTATTAGTGTATCATGTTCTCAAAGGGGAACACGAATTC
TAAATAGGAAGTCCCGAACTTGATGGCATTTCTTTGGAATTAACTGAAGC
CTATGCTGACGCCAGCAAAACATTAAGACACCTAGAAAAGGATCCCCTCG
TCATCAATGTAAATCTAGTCTGCACTTTTAACGGCAATCGATTATACTAA
AGTCCTTCCTTAGAGAGTCCATCACTTGGATTCTTTGGTTTTGGATTGAA
TTCTTTTTCCTCTCATACTTTTTTAAGAACAGTTCTTATGTAGCCATAAA
TGTAAATTAAACGGTAACGCCGGACATGGATATGGTAGGCTCAATTACTT
TTGATCTATGAACTTTCAATGCAAAGGTACTGAAAACCAAGAAAATATTC
CACCTTCTATTGCTTTCATTTCAGGGATACCGCTTCCAGATATCTACATT
GACAAAGCATACAAAGCAAGGTACTTTGTAGTTAGTATAAATGAATGTTA
ACTCGTGAATACTAGACCATGTCTTTAGAATGAACTCATCTTGTAGATTA
TTTTGGCTTTACAATTAAGTCTTTGTGCTTTTAATGGGTAGATCAAAATT
AAGTTTGTAATGGGCTGTTCCATTAAAAAACCATACATGGGGGGGGGGGN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGG
GGGGGGGTGGACGAACCTTTTCAAGTCAAAAAAATTATTGAAAATGTGTC
GATACCCCCTGGAAAATGGCGAAATTTGCATAAGTACCCTTGGAAAGATT
CTTTTCATACCTTAAAGTGAGGGTGCACGAACTGAAATCAGTCTTTTACC
CCATGGAAATTTTGGAATAACTTTTTACCCCCTTGAAATATGAAAAGACC
GCATAACCCTCTGGAAATGTTCGTCCACCCCATGTATGGATATAAAATCG
AATGGCGCTACTTATTATACGATCGGGCTTATGTGATCGGTTACGAACGA
TGTCTTAATTTACACGAAACCGATTCCATGTGACGGCATTTTCACCCACG
ATCAGTCATTTTTTAATAGAAATGGTAGAAAGATTATGTACAGGATGGTT
TAGAAACAACTTGATAACTCAAAGTCTTTTAATATTTCCCGTTTGGACCT
GCACATAGTTTTTTGTTTCGGGGTGAAATTTATGTCAGTTAGGAACAGGC
AAATTGCTTGAGGTTTGCTTGAAGATAGTGCCTAACTGAATTTTGCTGAA
ATGGTCTATATGAATGGTGAACACTTTGACTCTGAAAAAATAAGGCCCAA
TTTTCATATAATTTACAACCACCATATTTTTGTTTTCTATTCTAGTGGTG
GCGATGGGAACTTTGTGATTTCATCCAGTTTGACAGGTTTCACAGTGTTG
CATGGTGGTATGGCGCCAATGGTGGAAGATGGTTATGGAATCTTCTACTC
CATTAATAAAGACAGGTATAAGTCAACCCAAATGAATAGAAAAATCATTT
TATTCTGCCTGTCTTTTCTACCTTAGGGAAACTAATTTTGGTGGGAACTA
ATTTTGGCGGGAACTAATTTTCTCGGCTCATAAAAAATTCGAAAAATATC
GAATTTTGCGGGAATTAATTTTCCCGGTTTTGCCCTATTTTGGACACAAT
TATTTCATTTTCTAGGGATTTTTCAAATTTTTCGATGAAAAAATGGCCAA
ACTTGTAATTTACGGCTCTAAACTTATCTAGCTTCCGTACATGTTTCAAT
CTCCAGACACCCCGTTGACTTTAATATTAGACATTTTCAGGGCCATTGGT
GAAATTTTTCGTATTTTGCTGAAATCCAATTTCGCGAATTATGACGATGA
TGTAAAGCATTGCTGGCTTTTCTTAGAAATTGGAGGGTGAAAGTTTTTAT
TTTTTTCTCGTTTTACCTTTTCAAGAGAACATTAAGACGTGTGTCCTATA
AATGAAAGTAATCTTAAAACTATTATGTTAGCTATTTGAGTCACTTTTTT
TAAATGAATCATCAAAAATACCAATTTCCTTGCTATAAAAACTTTGGAAA
AGGAGAGTCTCGCAAAATTCCCTAATCTAAATCTTTTTTGACATTAAAGT
ATACGGACCAAAAGCTTCATAGATTTATATAGGCTATCGACATCCTTCTA
TTATGTTTTTGTAAGGGATACAAATCAACCTTGGATACAACTTTCGAGAA
ATTTGTCAAACAGTCTCTTCAAGAGTTTTTCAAAACAAAATGGACGTTTA
AAGTGAATTATATCATCGATACAAACAAACCCCTAAACAGACTGAATTTC
GAGATTTTCACTTCGAATTCTTTCATAAACACTTTTCTGCAGGCTAATCG
GAATGAAAGGTAGATTTACCCCGCATGGAAATCAACTTTGCTTCTCGATT
AATTTACGCCTGATTTTTTGCTCAGCTTGCCAATTCACGCCTTATAGACG
ATTATCAGATATGGATAAAGAATTTTTGACCAATCTCTGTTATGTAAAAC
ATATACAAGAGAAATCAAAACATAGCGTAAAAAGTAGTAAAATATTTTTT
GTTGTAAGAATCAGTAAACTTTGTCAAGACTCGACTGTTCTCATTTTTTT
TCAGCGCTTTAAGCCTCAAACTGTTCTTATTCTGTTCTTGATTTCAAGGT
AAAATTCAGCTTTTCCAGACTGAGGATCGTTCTTGAACTGTCCATATCTT
TTGGCAATGTTTGGCCTATTATTCTTATAGCATTTTTCTTATATAAAAAA
GAGCGTAGTCCTAAAGAATTTGTAATAATGCCTCAATGACAATGGAGTTT
GCACGTTCTCTCGAAGAGTGAATATTTTTAAGGTAAATAGCAATACATAA
TTTGAATTTCTATAGGGAACAATGGTCACAAAGTATTAAACTTGCACTTA
ACGTGATACAAATTACTGTATATTTTTGAATGATAAAGATATATACAAAA
TCTTCGAGTACGTCCTTACTACTGTACAAAAGAGGTCTGTCAAAATTCTA
AATTCTAAAGAGAAAAATTAAACATTATTTTTAATAAAATCTACATATAG
AAATAATAAATGAGAAATATTTGATACTTGAAATGTTTTCCCTTGTTTCC
CTGGTAAGTTGCTCATATTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCATCAAAAATACC
AATTTCCTTGCTATAAAAACTTTGGAAAAGGAGAGTCTCGCAAAATTCCC
TAATCTAAATCTTTTTTGACATTAAAGTATACGGACCAAAAGCTTCATAG
ATTTATATAGGCTATCGACATCCTTCTATTATGTTTTTGTAAGGGATACA
AATCAACCTTGGATACAACTTTCGAGAAATTTGTCAAACAGTCTCTTCAA
GAGTTTTTCAAAACAAAATGGACGTTTAAAGTGAATTATATCATCGATAC
AAACAAACCCCTAAACAGACTGAATTTCGAGATTTTCACTTCGAATTCTT
TCATAAACACTTTTCTGCAGGCTAATCGGAATGAAAGGTAGATTTACCCC
GCATGGAAATCAACTTTGCTTCTCGATTAATTTACGCCTGATTTTTTGCT
CAGCTTGCCAATTCACGCCTTATAGACGATTATCAGATATGGATAAAGAA
TTTTTGACCAATCTCTGTTATGTAAAACATATACAAGAGAAATCAAAACA
TAGCGTAAAAAGTAGTAAAATATTTTTTGTTGTAAGAATCAGTAAACTTT
GTCAAGACTCGACTGTTCTCATTTTTTTTCAGCGCTTTAAGCCTCAAACT
GTTCTTATTCTGTTCTTGATTTCAAGGTAAAATTCAGCTTTTCCAGACTG
AGGATCGTTCTTGAACTGTCCATATCTTTTGGCAATGTTTGGCCTATTAT
TCTTATAGCATTTTTCTTATATAAAAAAGAGCGTAGTCCTAAAGAATTTG
TAATAATGCCTCAATGACAATGGAGTTTGCACGTTCTCTCGAAGAGTGAA
TATTTTTAAGGTAAATAGCAATACATAATTTGAATTTCTATAGGGAACAA
TGGTCACAAAGTATTAAACTTGCACTTAACGTGATACAAATTACTGTATA
TTTTTGAATGATAAAGATATATACAAAATCTTCGAGTACGTCCTTACTAC
TGTACAAAAGAGGTCTGTCAAAATTCTAAATTCTAAAGAGAAAAATTAAA
CATTATTTTTAATAAAATCTACATATAGAAATAATAAATGAGAAATATTT
GATACTTGAAATGTTTTCCCTTGTTTCCCTGGTAAGTTGCTCATATTTTA
ACTTTTACTTGGCACTTTTATTAACATTTTTTGCAAATCGTAAACTTCGT
CATAATTTTGAAATACAAAAACGGGTTCAATAGAGAGTTCAAAAATGTAG
GTGTAAGCATCACCATCTCGTCAGTGAATTCAGATTCTTCAGGGTCCGGT
AATTTGCCTGTAATACTATAGATCGTTGCAAATATAGCAAACGGAAGCCA
ACACACCAGGAAGCAAACGTTGATGGCAATTGCCAGTTTGAGCAGACGTT
TTTCTTTTCTGTCGCGAGCATCATCCGACGTCGTCCTGTTATAGGACCCA
GGGCCATTGGCAAACTTCTTTTTGCTCTGTCGCAGACGGCGCCAAATAAA
AATATAGGAGAAGCATAATAAAATAATCGTTGAGTATATCAGAATCGGTA
TCACGATATACTCTATGTCACCAACCTTGTCAGACCGAAATGGATATTTG
TTTGATTTACAGGATACATGTAAACGCTGGCTGATATATTTTTGATTACT
CTTGTTGTTTTCTAATTCTTTAACATCAATTTTCAAGTAATTTAATCTTT
GANATACCGCTTCCAGATATCTACATTGACAAAGCATACAAAGCAAGGTA
CATTGTAGTTAGTATAAATGAATGTTAACTCGTGAATACTAGACCATGTC
TTTAAAACGAACTAATGGATCTATCCACATGAAGTTTGTAATGTGTTATT
GCTTTACTTATACGATCGGATACGAACGATATCTTAATTTACACGATACC
GATTCCATGTGACGTCATTTTCACCCACGACCAGTCATTTTTAATAGAAA
TGGTAGAAAGATTATGCACAGGATGGTTTAGAAACAACTTGATAACTCAA
AGTCTTTAAATATTTCCCGTTTGGACCTGCACATAGTTTTTTTGTTTCGA
GGTGAAATTTATGTTAGTTAGGAACAGGCAGCTTGCTTGAGGTTTGCTTG
AAGATAGTACCTAACTGGATTTTGCTGAATTGGTCTATATGAATGGTGAA
CACTTTGACTCTGAAAAAATAAGGCCCAATTTTCATATAATTTACAACCA
CCATATTTTTGTTTTCTATTCTAGTGGTGGCGATGGGAACTTTGTGATTT
CATCCAGTTTGACAGGTTTCACAGTGTTGCATGGTGGTATGGCGCCAATG
GTGGAAGATGGTTATGGAATCTTCTACTCCATTAATAAAGACAGGTATAA
GTCAACCCAAATGAATAGAAAAATCATTTTATTCTGCCTGTCTTTTCTAC
CTTAGGGAAACTAATTTTGGTGGGAACTAATTTTGGCGGGAACTAATTTT
CTCGGCTCATAAAAAATTCGAAAAATATCGAATTTTGCGGGAATTAATTT
TCCCGGTTTTGCCCTATTTTGGACACAATTATTTCATTTTCTAGGGATTT
TTCAAATTTTTCGATGAAAAAATGGCCAAACTTGTAATTTACGGCTCTAA
ACTTATCTAGCTTCCGTACATGTTTCAATCTCCAGACACCCCGTTGACTT
TAATATTAGACATTTTCAGGGCCATTGGTGAAATTTTTCGTATTTTGCTG
AAATCCAATTTCGCGAATTATGACGATGATGTAAAGCATTGCTGGCTTTT
CTTAGAAATTGGAGGGTGAAAGTTTTTATTTTTTTCTCGTTTTACCTTTT
CAAGAGAACATTAAGACGTGTGTCCTATAAATGAAAGTAATCTTAAAACT
ATTATGTTAGCTATTTGAGTCACTTTTTTTAAATGAANTAAACATTATTT
TTAATAAAATCTACATATAGAAATAATAAATGAGAAATATTTGATACTTG
AAATGTTTTCACTTGTTTCCCTGGTAAGTTGCTCATATTTTGACTTTTAC
TTGGCTTTTGTCTTTTATTAACATTTTTTGCAAATCGTAAACTTCGTCAT
AATTTTAAAATACAAAAACGGGTTCAATAGAGAGTTCAAAAATGCAGGTG
TAAGCATCACCATCTCGTCAGTGAATTCAGATTCTTCAGGGTCCGGTAAT
TTGCCTGTAATACTATAGATCGTTGCAAATATAGCAAACGGAAGCCAACA
CACCAGGAAGCAAACGTTGATGGCAATTGCCAGTTTGAGCAGACGTTTTT
CTTTTCTGTCGCGAGCATCATCCGACGTCGTCCTGTTATAGGACCCAGGG
CCATTGGCAAACTTCTTTTTGCTCTGTCGCAGACGGCGCCAAATAAAAAT
ATAGGAGAAGCATAATAAAATAATCGTTGAGTATATCAGAATCGGTATCA
CGATATACTCTATGTCACCAACCTTGTCAGACCGAAATGGATATTTGTTT
GATTTACAGGATACATGTAAACGCTGGCTGATATATTTTTGATTACTCTT
GTTGTTTTCTAATTCTTTAACATCAATTTTCAAGTAATTTAATCTTTGAA
GCTCATCTGCGCTCATCCACTTGACCGAGTTCTCGAATGTGAATTGCATG
GTTCCATTTTCCATCATCTTACATCTTTTTAAATGGCGTGAATAAGTTGT
CCGAAGGAAAATGTTTTTGGTAGAGTTATACGGTTGCGTTCCTTAGCGAC
ATTATGTGCATGTTGTCCTTTGTTATAACAACACAAATGATTATTGTAGG
AACCCATATAATAAAACATACAATGATTGCGTGTATATTTTTCATGGTTC
TGTGTTTAAACGGTGCCGCGGTAGCAAGAAAGCGATCTACTGTTAATGCA
ACGAGATTTAGAACTGAGAGTAGCAATGAAATGCGAAACGCTACAATATA
ATTAATCTCCCACAAGGTGTCGCTATCGATCCACCATGTAAAGCCCATTA
TCAAAAAAAACGAGCCGCCTACTCCTACAAGTAAATCGGACAGTGATAGG
TTAAGAAGATAAATGTTTGATTTCTGCCATCCATCTTTTTTGCTCCGTTT
GACGATCAAGACGATCTCAATCAAATTCAAAAATAAAGCTCCGATAGAGG
AAATACCAAAAACCACGATACAAACAATAAAAAAGGAGACATTCATTTTA
TTGTCGTGGTTTCTTGTTGAAAACTAGTTGATAAAAAACTCCGTGTTCCC
TCTAACCACCGCTAAATAAAAAATCTATGCAAATCTTTTCTCCGTTTAAA
AGGTCATACCTCAAACATGTTTCAAACCAACTGAAAAAGTATAAAATATT
GATACTTTTTCTTGAAGAACCATGATGATTTTTGATTCAATGATTATGTA
TTCATAATACCAAGAATGATAATACTAGCGATATACGGCTCTATTCATCA
AGTTAGAAAACCGAATAGAAAAATTTGAATTTAAATATTGAATAGATGTT
CAAATCGGTAGAAGCTATTGCTTTAATGCCAATTAAATACTTCACTTGCT
TTCATGATGGCGTAAGTTACTTAACGTATCCAAACTGAAAAAAACCTCTA
TAGTAAATAAATATTAATATTGTACCATGTGGACCTTAAATGTTTGAAAA
TTTTTCAACACTCTGGGACTACTAGATTGCCGAGATGACGTGCATGCGTC
GAAAATCGCTGTGTTAGAAAGTGAAAAATTGACACTTTACTCCCCTCCCT
AATGAGATCTTTACTTCTGGTCCAAATTTTCTGAAAATCTTGACCCTTTG
AGAGAAGGAATTATAGATTTTCGTAATTTTCAATCCTTTCAGAAAATAAA
TTTGCTTTTGCATTTGAATTTAGGTTTGTGATAAAGTTACCCTTTCTCAT
AACGTTTGTTACTTAACTATGACGCAACTATGAGAATTTTTGTCGAAAAA
TGTTTGTTTTTTTTATCTCTAAAACATCCATTGTCTTTAGACGTAAAATA
GCGAATTCCCCAAAGTCAATAAGCGTAGAATTATTGCTTTTCAAAATTCT
AAACCAATCAAAATAGTACATAGAAAACTATGCTAGCTCCCCCCCTCTGG
CGACCAAACTGGTTGCTGAAGCCATTGCCATCAGACGGAAAGATCGAGAT
TTCGTCACCAGGTTTCCGGGCTAATCCGATGATCATCTACAAGGCGTGAA
ACAGTCTGTAATGTTTTCGGTTGTTTAAAGATTTTATTTTTACATACTCC
TAGGTTCCAAATAAACGGCCCCCCCCGCTTGTTAATTTTTTGAAAATTTT
CCAACCCCCCGGACCTTATTAGGACCCCCCGATTATTAATCTCTAAGAAT
ATTTTCAGCTGTCAAAGAGAAGGCCCCTTATTTTGCNTTAATTGTTATTT
ATTATGTTTGCCTTCTCTTAAACCACTATTCGGCAGTTTCAGATAAAACC
ATTACCCCCGGGGACCCCCCGTTTATTAATTTTTAAGAATATTTTTAGTT
GTCAAAGAGTAGGCCCCTATTTTGCTCCAAATAGCTTGATTTTAGCCTAA
ATTTACCTTATTTTTGGGTTTTCAGAAGTACAATTTCCAACCCCCTGGCA
ATTAGGTCCCCCAGGCAATTAGGTCCCCCCCCCCGTTTATTAAAATCTAG
AAAATTTTCCAACCCCCCCGTTTATTTGGAACCTAAGAGTAAGTGTTCCC
GTTTCATATCAGACACATTTTTCATATCAGGATAGTGCCTGCCTATTGTT
ACATTAAGATGATATAAGCATAAAAATGTTTTTCTTTTCCTCGACCAATC
TTGCTCCACATCCATATCAATCCAATGTCAAAAAGCTTGTAAATTAAAAT
TAACGAGTAATCAAACGACATCACTCTTATTTAAAAACAAAACCTTTAAA
GTATCTTTTCTTTTTATTCTAGAACTCAGGTTGTTTTATCTTCATGGAAA
ACTTCACAGAAGACTGATCACTTGAAAATGTACGATGCTATTGTCTCATC
ATTGGACAAGATCAAAGAGCTCTGTCAACTCTCCAAAATGTAGAATGCTT
TTAGCGATGGTAGAACGTCCTTTTTGGGCTAGCATCAATACTGGTCAGTA
TTGGTATGAAGATTTTTAGTTTTAATATTGTAAATTATCATTGAACACTA
ATTAAGATAGCTCATAATCAATGATTAATGATTAGAACTAGTTACTCTTG
GGTGCCTAATAAACGCCCCTCCCGTCCACCCGCTTATTAATTTTTCAATT
TATTTTAACCCTCGGGCCTTGATATTTTACAATTTGGTCCCCCTTTTATT
AGTCACCTGAGAGTATGATTATGCATCAAGGACATACTTTCTTCATTTTC
TGCTTCAATCACTTCTTTGAACTTACCACTATATAAACCATGCATTTATC
TTCTTCCAAACATTTATCAATACTATTCCACACATGCGCACTACGTATAT
TTTTACTAACCTGTTTATATTGTTCATAATTCACTCATTTTATCACAACT
TTCTACGCATGCGTTTTCAAATTCATATTCAGTTCTATGTTCAGTTATAT
CACACCCCTGTCTCACTGATGACCCGTTGAGAATTTTTCACCGTTTGTAA
ATTTTCTTTTGTCCAAATATGGAGTATGTATCAAAGTTGAAATTTTGGTG
ATTTTTATAGTATTTCATCCTAACCTTGATGCACAATGCTGGACTCTTTT
GCACTTTGAGTACTCTACATTCAACACTATGTAACTTTTTCAGGCTAAAA
TGCAATAATTAGTTAGTACTTCCTAACCAATACATGTATAATCAATGGAA
GCATATTTTATTACACATATTATTACGATATTATTATCATACAGAGGAAA
CCCAATAGAGCTATAATAGCATAAACCAGTCAAAATCTTTAGAATAAAGT
AATGAAACCAAACCATATTGTGTTTAACCGATCAATTTTTAAGAAGCAAA
TGTGATCTTTGGTGTTTTATTTGGATAATGTGATAAAAACCTTGCATTCT
TAAAACCTTTGTAGAAACTTTATGGATTTTTTTCAATTTTTTGAAAACAT
TTTCAAAAATTTTAAGATTTAGAATTTTTTTTTTGTGTAAATAATTTTGG
ATCATATTTTTTCTAACAGGACATTTTATTAGATTTTGAAGATAATTGAA
CATAATTTTTGAATTCAACAAGGCACCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015119XLOC_015119Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026922-exon-sc0000596-1575043694:143284..143396TCONS_00026922-exon-sc0000596-1575043694:143284..143396Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1575043694:142774..142904TCONS_00026922-exon-sc0000596-1575043694:142774..142904Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1575043694:142357..142480TCONS_00026922-exon-sc0000596-1575043694:142357..142480Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1575043694:141564..141642TCONS_00026922-exon-sc0000596-1575043694:141564..141642Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1575043694:141236..141283TCONS_00026922-exon-sc0000596-1575043694:141236..141283Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1575043694:140777..140822TCONS_00026922-exon-sc0000596-1575043694:140777..140822Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1575043694:134653..134772TCONS_00026922-exon-sc0000596-1575043694:134653..134772Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1575043694:129867..131124TCONS_00026922-exon-sc0000596-1575043694:129867..131124Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1510915933:143284..143396TCONS_00026922-exon-sc0000596-1510915933:143284..143396Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1510915933:142774..142904TCONS_00026922-exon-sc0000596-1510915933:142774..142904Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1510915933:142357..142480TCONS_00026922-exon-sc0000596-1510915933:142357..142480Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1510915933:141564..141642TCONS_00026922-exon-sc0000596-1510915933:141564..141642Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1510915933:141236..141283TCONS_00026922-exon-sc0000596-1510915933:141236..141283Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1510915933:140777..140822TCONS_00026922-exon-sc0000596-1510915933:140777..140822Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1510915933:134653..134772TCONS_00026922-exon-sc0000596-1510915933:134653..134772Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1510915933:129867..131124TCONS_00026922-exon-sc0000596-1510915933:129867..131124Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1491911889:143284..143396TCONS_00026922-exon-sc0000596-1491911889:143284..143396Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1491911889:142774..142904TCONS_00026922-exon-sc0000596-1491911889:142774..142904Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1491911889:142357..142480TCONS_00026922-exon-sc0000596-1491911889:142357..142480Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1491911889:141564..141642TCONS_00026922-exon-sc0000596-1491911889:141564..141642Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1491911889:141236..141283TCONS_00026922-exon-sc0000596-1491911889:141236..141283Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1491911889:140777..140822TCONS_00026922-exon-sc0000596-1491911889:140777..140822Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1491911889:134653..134772TCONS_00026922-exon-sc0000596-1491911889:134653..134772Clytia hemisphaericaexon
TCONS_00026922-exon-sc0000596-1491911889:129867..131124TCONS_00026922-exon-sc0000596-1491911889:129867..131124Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000596supercontigsc0000596:129867..143396 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.547941	0.409715	0.130203	0.293503	0	0	0	7.67358e-09	3.78276	3.99617	5.62284	3.01703	2.98462	3.2417	2.55551	3.95803	1.98964	1.63729	0.49077	1.90005	1.53651	1.57763	1.09637	1.2693	0	0	0.651603	0.429204	0.541541	0.444041
Blast
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BLAST of TCONS_00026922 vs. Swiss-Prot (Human)
Match: OCTC (Peroxisomal carnitine O-octanoyltransferase OS=Homo sapiens GN=CROT PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 8.130e-53
Identity = 97/242 (40.08%), Postives = 142/242 (58.68%), Query Frame = 3 
Query:   36 PVEIVFTVDDTIRDYIKEAVXXXXXXXXXXXXXDKPIEHYGKAFAKTVRINPDTVFQMAMQLAYYSLNKSVCPTYESGTTRMFYHGRTETNRSCTVESKEWCEAMFNNQKTGPERLELFRKAVQKHDTLMLDACQGKGIDRHLFLLKKISEEEGIPLPDIYIDKAYKASGGDGNFVISSSLTGFTVLHGGMAPMVEDGYGIFYSINKDRTQVVLSSWKTSQKTDHLKMYDAIVSSLDKIKEL 761
            P E++F VD+ + + I +A   +   +S L +       +GK   K   ++PDT  Q+A+QLAYY L+      YE+  TR FYHGRTET RSCTVE+  WC++M +      ER +   +A  KH+ +M D   GKG DRHL  L  I++EEG+P+P+++ D  +  SGG GNFV+S+SL G+  + G + PMV +GYG FY I  DR  V  S+WK+  +TD  K+      +   + +L
Sbjct:  365 PEELIFIVDEKVLNDINQAKAQYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 606
The following BLAST results are available for this feature:
BLAST of TCONS_00026922 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OCTC8.130e-5340.08Peroxisomal carnitine O-octanoyltransferase OS=Hom... [more]
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