TCONS_00026925 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026925
Unique NameTCONS_00026925
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2083

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026925 ID=TCONS_00026925|Name=TCONS_00026925|organism=Clytia hemisphaerica|type=transcript|length=2083bp
ttcaaatgttttttttatattttacactATTGCACTCCTAGGCCACCATA
CAAATCAGATCTTCAATGAAAATACTAATCCATCTACTCAACGCGATCTT
TAAAACATATTTCTGCATAAAATAAATCATAGTAAATGAAAACACGCatt
tattatatatattttttagccTGGGTACGAACCGCAACAAGGCGAAGAAC
CAGTAGAGATAGTCTTCACTGTGGATGATACCATTCGTGATTACATCAAA
GAAGCTGTCCATCTACACGGCCTCATCTCTTCATCTCTTGGATTGATTGA
CAAACCGATCGAACATTACGGAAAAGCTTTCGCAAAGACTGTTCGTATAA
ACCCAGATACGGTCTTTCAAATGGCCATGCAACTGGCTTACTACTCTCTC
AATAAAAGCGTTTGTCCGACTTACGAATCAGGGACTACCCGTATGTTTTA
CCACGGACGAACGGAAACAAACCGGTCATGCACTGTAGAGTCTAAAGAAT
GGTGTGAGGCTATGTTCAATAACCAAAAGACGGGACCAGAACGCTTGGAA
TTATTCAGAAAGGCGGTGCAGAAGCACGATACTTTGATGTTGGATGCATG
CCAGGGCAAAGGTATCGACAGACATTTGTTCCTCTTGAAGAAGATCAGCG
AAGAAGAAGGGATACCGCTTCCAGATATCTACATTGACAAAGCATACAAA
GCAAGTGGTGGCGATGGGAACTTTGTGATTTCATCCAGTTTGACAGGTTT
CACAGTGTTGCATGGTGGTATGGCGCCAATGGTGGAAGATGGTTATGGAA
TCTTCTACTCCATTAATAAAGACAGAACTCAGGTTGTTTTATCTTCATGG
AAAACTTCACAGAAGACTGATCACTTGAAAATGTACGATGCTATTGTCTC
ATCATTGGACAAGATCAAAGAGCTCTGTCAACTCTCCAAAATGTAGAATG
CTTTTAGCGATGGTAGAACGTCCTTTTTGGGCTAGCATCAATACTGGTCA
GTATTGGtatgaagatttttagttttaaTATTGTAAATTATCATTGAACA
CTAATTAAGATAGCTCATAATCAATGATTAATGATTAGAACTAGTTACTc
ttgggtgcctaataaacgcccctcccgtccacccgcttattaatttttca
atttattttaacCCTCGGGCCTTGATATTTTACAATTTGGTCCCCCTTTT
ATTAGTCACCTGAGAGTATGATTATGCATCAAGGACatactttcttcatt
ttctgCTTCAATCACTTCTTTGAACTTACCACTATATAAACCATGCATTT
ATCTTCTTCCAAACATTTATCAATACTATTCCACACATGCGCACTACGTA
TATTTTTACTAACCTGTTTATATTGTTCATAATTCACTCATTTTATCACA
ACTTTCTACGCATGCGTTTTCAAATTCATATTCAGTTCTATGTTCAGTTa
tatcacacccctgtctcactgatgACCCGTTGAGAATTTTTCACcgtttg
taaattttcttttgtccAAATATGGAGTATGTatcaaagttgaaattttg
gtgatttttataGTATTTCATCCTAACCTTGATGCACAATGCTGGACTCT
TTTGCACTTTGAGTACTCTACATTCAACACTATGTAACTTTTTCAGGCTA
AAATGCAATAATTAGTTAGTACTTCCTAACCAATACATGTATAATCAATG
GAAGCATATTTTATTACACATATTATTACGATATTATTATCATACAGAGG
AAACCCAATAGAGCTATAATAGCATAAACCAGTCAAAATCTTTAGAATAA
AGTAATGAAACCAAACCATATTGTGTTTAACCGATCAATTTTTAAGAAGC
AAATGTGATCTTTGGTGTTTTATTTGGATAATGTGATAAAAACCTTGCAT
TCTTAAAACCTTTGTAGAAActttatggatttttttcaattttttgaaaa
cattttcaaaaattttaagatttagaattttttttttgtgtaaatAATTT
TGGAtcatattttttctaacaggacattttattagattttgaagATAATT
GAACATAATTTTTGAATTCAACAAGGCACCAAT
Run BLAST on NCBI

transcript from alignment at sc0000596:129867..143560-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026925 ID=TCONS_00026925|Name=TCONS_00026925|organism=Clytia hemisphaerica|type=transcript|length=13694bp|location=Sequence derived from alignment at sc0000596:129867..143560- (Clytia hemisphaerica)
TTCAAATGTTTTTTTTATATTTTACACTATTGCACTCCTAGGCCACCATA
CAAATCAGATCTTCAATGAAAATACTAATCCATCTACTCAACGCGATCTT
TAAAACATATTTCTGCATAAAATAAATCATAGTAAATGAAAACACGCATT
TATTATATATATTTTTTAGCCTGGGTACGAACCGCAACAAGGCGAAGAAC
CAGTAGAGATAGTCTTCACTGTGGATGATACCATTCGTGATTACATCAAA
GAAGCTGTCCATCTACACGGCCTCATCGTATGTTCTCTTTATAGGAATAT
CAGTCTCGACTTTTGCCACAATCTTAGAGCAAATTAATGCTGATTTAAAG
GCCTTTTTGACAAATAAATCAATAAATTTAAAGCTCTTTGAGAACTTTTT
AGGAGCATCTTAAGCCTAAAAATCATACAAGGATCAAAATATTACACACA
AAAAACTGGTTTTTATGGAAAGGCCTGTATTTCCTATGATCTATTACGGT
TGATAAAGTTTTGTTCTAATAATTTAATTTCTGTGCTATCAATGAAAAAA
AAAACACAAAATAATTTCTTCACAGCTTTTGACACTTGCACTTGTTTATT
TGTTTTTTTATCTCAATTAAGAGTATTGTTTTTCGCACCTTTTGTTTTCT
TTCTAGTCTTCATCTCTTGGATTGATTGACAAACCGATCGAACATTACGG
AAAAGCTTTCGCAAAGACTGTTCGTATAAACCCAGATACGGTCTTTCAAA
TGGCCATGCAACTGGCTTACTACTCTCTCAATAAAAGGTATGTCATCTTT
TGCGTATGTTATGATTCTTTGGTTGAAACTGGATCAGAAAACTTTTCCTG
GATTCAACACCTCTACTTTTAAAAATTGTTTTTAGAGCCTTTCAAGTCCT
CTTTAAATTTCATAGTACCTCTCCTATAATTTTCATTTATATCAAACCAA
TCAGATTTATGAGTAGACTTCAACCTGCTTGCCTGATTTAGGTATATCAT
TTTAGTCTTGATAACAGTAAACTATCGAAACCCAAAGAAAACAAAAATGA
GTGCTTTTTTTTGTTTATATCTTATTTTAGCGTTTGTCCGACTTACGAAT
CAGGGACTACCCGTATGTTTTACCACGGACGAACGGAAACAAACCGGTCA
TGCACTGTAGAGTCTAAAGAATGGTGTGAGGCTATGTTCAATAACCAAAA
GACGGTAAGTGCAAAGAGGAAAAAAAATCTTTCGAAAGAGTAAATTTAAG
CTTCTTAGCTAGGTAATTTTACTTGTGGTTTTCACTTGTGGTTTTCACTT
GTGGTTTTCACTTTTAAATTTTGTCATGTATTTTCATTACTATTTATATA
TTCGATTGCTTGAGTTGCACTTATATTATAACCTTGGATACACTGGGTGA
CGATAGTCGGCCTTTAATGTGCCGCATCCCTAGTCGGGTTCAACTAACCT
GTGCGTAAACTTGAAAATATTTCTGTTGGACCCGCGAATCCCCAAAGACG
AGGGCGGAGGTCCAGGCATCCCGCTGCAAAATTTCACGCTGTCTTGCGAA
ATTCCATAATGTAAACCTTGCAGATGTTGAAAGTTTTCCTGACCGTCAGA
GCTTTAGCGTGTCGGATGAAAATTTCTGCATCTGGGTGCCAGATAAGGTT
CAAACTGAATCTGAAATGGGAATACAACCACGTACATTGACTTAAACATT
ATTCTAGGCAATTAATTGTCTTAATGACAACCTATTAAATAGTATGTGAA
ATTTCCAAACGAGTAACCTCAGTGCTAACAGCCAAATGATATCGTTTTGG
AGAAATGTTTCTCAAATCCTTTATTTCAACTTGGAAAAAACTCTAGGACT
TAAAATTTAGGATTGTACGAAGAAGCGTTTCATTAAAGCTTTCAAGTAAG
ATTTTCATGCTTTTAAAGGGACCAGAACGCTTGGAATTATTCAGAAAGGC
GGTGCAGAAGCACGATACTTTGATGTTGGATGCATGCCAGGGCAAAGGTA
GGTGCTTAAGCCAATGAGACAAAACCATCTTGTGAGAACTCGTTATAACA
TCTGGTATTAATATCCCCTCAGTTTCAAATTTTGTAATTTTCATTATATC
TATATGATAATAGCCGTACTTATTTAGAAATATTTCCAATTAGCCCGAAT
GTATTGAGGGTTGCTTTCAATAAATCACCTTCCAAATTGCCCAGTTTGAG
AGAGACATTTTTTTTAAAGTGACTGCTTCTGCTACTGAAGTAAAGAAAGC
TACTACTTTTTCTTTTTTTCCTATCAGGTATCGACAGACATTTGTTCCTC
TTGAAGAAGATCAGCGAAGAAGAAGGTATTAGTGTATCATGTTCTCAAAG
GGGAACACGAATTCTAAATAGGAAGTCCCGAACTTGATGGCATTTCTTTG
GAATTAACTGAAGCCTATGCTGACGCCAGCAAAACATTAAGACACCTAGA
AAAGGATCCCCTCGTCATCAATGTAAATCTAGTCTGCACTTTTAACGGCA
ATCGATTATACTAAAGTCCTTCCTTAGAGAGTCCATCACTTGGATTCTTT
GGTTTTGGATTGAATTCTTTTTCCTCTCATACTTTTTTAAGAACAGTTCT
TATGTAGCCATAAATGTAAATTAAACGGTAACGCCGGACATGGATATGGT
AGGCTCAATTACTTTTGATCTATGAACTTTCAATGCAAAGGTACTGAAAA
CCAAGAAAATATTCCACCTTCTATTGCTTTCATTTCAGGGATACCGCTTC
CAGATATCTACATTGACAAAGCATACAAAGCAAGGTACTTTGTAGTTAGT
ATAAATGAATGTTAACTCGTGAATACTAGACCATGTCTTTAGAATGAACT
CATCTTGTAGATTATTTTGGCTTTACAATTAAGTCTTTGTGCTTTTAATG
GGTAGATCAAAATTAAGTTTGTAATGGGCTGTTCCATTAAAAAACCATAC
ATGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGGGGGGGGGGGTGGACGAACCTTTTCAAGTCAAAAAAATT
ATTGAAAATGTGTCGATACCCCCTGGAAAATGGCGAAATTTGCATAAGTA
CCCTTGGAAAGATTCTTTTCATACCTTAAAGTGAGGGTGCACGAACTGAA
ATCAGTCTTTTACCCCATGGAAATTTTGGAATAACTTTTTACCCCCTTGA
AATATGAAAAGACCGCATAACCCTCTGGAAATGTTCGTCCACCCCATGTA
TGGATATAAAATCGAATGGCGCTACTTATTATACGATCGGGCTTATGTGA
TCGGTTACGAACGATGTCTTAATTTACACGAAACCGATTCCATGTGACGG
CATTTTCACCCACGATCAGTCATTTTTTAATAGAAATGGTAGAAAGATTA
TGTACAGGATGGTTTAGAAACAACTTGATAACTCAAAGTCTTTTAATATT
TCCCGTTTGGACCTGCACATAGTTTTTTGTTTCGGGGTGAAATTTATGTC
AGTTAGGAACAGGCAAATTGCTTGAGGTTTGCTTGAAGATAGTGCCTAAC
TGAATTTTGCTGAAATGGTCTATATGAATGGTGAACACTTTGACTCTGAA
AAAATAAGGCCCAATTTTCATATAATTTACAACCACCATATTTTTGTTTT
CTATTCTAGTGGTGGCGATGGGAACTTTGTGATTTCATCCAGTTTGACAG
GTTTCACAGTGTTGCATGGTGGTATGGCGCCAATGGTGGAAGATGGTTAT
GGAATCTTCTACTCCATTAATAAAGACAGGTATAAGTCAACCCAAATGAA
TAGAAAAATCATTTTATTCTGCCTGTCTTTTCTACCTTAGGGAAACTAAT
TTTGGTGGGAACTAATTTTGGCGGGAACTAATTTTCTCGGCTCATAAAAA
ATTCGAAAAATATCGAATTTTGCGGGAATTAATTTTCCCGGTTTTGCCCT
ATTTTGGACACAATTATTTCATTTTCTAGGGATTTTTCAAATTTTTCGAT
GAAAAAATGGCCAAACTTGTAATTTACGGCTCTAAACTTATCTAGCTTCC
GTACATGTTTCAATCTCCAGACACCCCGTTGACTTTAATATTAGACATTT
TCAGGGCCATTGGTGAAATTTTTCGTATTTTGCTGAAATCCAATTTCGCG
AATTATGACGATGATGTAAAGCATTGCTGGCTTTTCTTAGAAATTGGAGG
GTGAAAGTTTTTATTTTTTTCTCGTTTTACCTTTTCAAGAGAACATTAAG
ACGTGTGTCCTATAAATGAAAGTAATCTTAAAACTATTATGTTAGCTATT
TGAGTCACTTTTTTTAAATGAATCATCAAAAATACCAATTTCCTTGCTAT
AAAAACTTTGGAAAAGGAGAGTCTCGCAAAATTCCCTAATCTAAATCTTT
TTTGACATTAAAGTATACGGACCAAAAGCTTCATAGATTTATATAGGCTA
TCGACATCCTTCTATTATGTTTTTGTAAGGGATACAAATCAACCTTGGAT
ACAACTTTCGAGAAATTTGTCAAACAGTCTCTTCAAGAGTTTTTCAAAAC
AAAATGGACGTTTAAAGTGAATTATATCATCGATACAAACAAACCCCTAA
ACAGACTGAATTTCGAGATTTTCACTTCGAATTCTTTCATAAACACTTTT
CTGCAGGCTAATCGGAATGAAAGGTAGATTTACCCCGCATGGAAATCAAC
TTTGCTTCTCGATTAATTTACGCCTGATTTTTTGCTCAGCTTGCCAATTC
ACGCCTTATAGACGATTATCAGATATGGATAAAGAATTTTTGACCAATCT
CTGTTATGTAAAACATATACAAGAGAAATCAAAACATAGCGTAAAAAGTA
GTAAAATATTTTTTGTTGTAAGAATCAGTAAACTTTGTCAAGACTCGACT
GTTCTCATTTTTTTTCAGCGCTTTAAGCCTCAAACTGTTCTTATTCTGTT
CTTGATTTCAAGGTAAAATTCAGCTTTTCCAGACTGAGGATCGTTCTTGA
ACTGTCCATATCTTTTGGCAATGTTTGGCCTATTATTCTTATAGCATTTT
TCTTATATAAAAAAGAGCGTAGTCCTAAAGAATTTGTAATAATGCCTCAA
TGACAATGGAGTTTGCACGTTCTCTCGAAGAGTGAATATTTTTAAGGTAA
ATAGCAATACATAATTTGAATTTCTATAGGGAACAATGGTCACAAAGTAT
TAAACTTGCACTTAACGTGATACAAATTACTGTATATTTTTGAATGATAA
AGATATATACAAAATCTTCGAGTACGTCCTTACTACTGTACAAAAGAGGT
CTGTCAAAATTCTAAATTCTAAAGAGAAAAATTAAACATTATTTTTAATA
AAATCTACATATAGAAATAATAAATGAGAAATATTTGATACTTGAAATGT
TTTCCCTTGTTTCCCTGGTAAGTTGCTCATATTTTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
TCATCAAAAATACCAATTTCCTTGCTATAAAAACTTTGGAAAAGGAGAGT
CTCGCAAAATTCCCTAATCTAAATCTTTTTTGACATTAAAGTATACGGAC
CAAAAGCTTCATAGATTTATATAGGCTATCGACATCCTTCTATTATGTTT
TTGTAAGGGATACAAATCAACCTTGGATACAACTTTCGAGAAATTTGTCA
AACAGTCTCTTCAAGAGTTTTTCAAAACAAAATGGACGTTTAAAGTGAAT
TATATCATCGATACAAACAAACCCCTAAACAGACTGAATTTCGAGATTTT
CACTTCGAATTCTTTCATAAACACTTTTCTGCAGGCTAATCGGAATGAAA
GGTAGATTTACCCCGCATGGAAATCAACTTTGCTTCTCGATTAATTTACG
CCTGATTTTTTGCTCAGCTTGCCAATTCACGCCTTATAGACGATTATCAG
ATATGGATAAAGAATTTTTGACCAATCTCTGTTATGTAAAACATATACAA
GAGAAATCAAAACATAGCGTAAAAAGTAGTAAAATATTTTTTGTTGTAAG
AATCAGTAAACTTTGTCAAGACTCGACTGTTCTCATTTTTTTTCAGCGCT
TTAAGCCTCAAACTGTTCTTATTCTGTTCTTGATTTCAAGGTAAAATTCA
GCTTTTCCAGACTGAGGATCGTTCTTGAACTGTCCATATCTTTTGGCAAT
GTTTGGCCTATTATTCTTATAGCATTTTTCTTATATAAAAAAGAGCGTAG
TCCTAAAGAATTTGTAATAATGCCTCAATGACAATGGAGTTTGCACGTTC
TCTCGAAGAGTGAATATTTTTAAGGTAAATAGCAATACATAATTTGAATT
TCTATAGGGAACAATGGTCACAAAGTATTAAACTTGCACTTAACGTGATA
CAAATTACTGTATATTTTTGAATGATAAAGATATATACAAAATCTTCGAG
TACGTCCTTACTACTGTACAAAAGAGGTCTGTCAAAATTCTAAATTCTAA
AGAGAAAAATTAAACATTATTTTTAATAAAATCTACATATAGAAATAATA
AATGAGAAATATTTGATACTTGAAATGTTTTCCCTTGTTTCCCTGGTAAG
TTGCTCATATTTTAACTTTTACTTGGCACTTTTATTAACATTTTTTGCAA
ATCGTAAACTTCGTCATAATTTTGAAATACAAAAACGGGTTCAATAGAGA
GTTCAAAAATGTAGGTGTAAGCATCACCATCTCGTCAGTGAATTCAGATT
CTTCAGGGTCCGGTAATTTGCCTGTAATACTATAGATCGTTGCAAATATA
GCAAACGGAAGCCAACACACCAGGAAGCAAACGTTGATGGCAATTGCCAG
TTTGAGCAGACGTTTTTCTTTTCTGTCGCGAGCATCATCCGACGTCGTCC
TGTTATAGGACCCAGGGCCATTGGCAAACTTCTTTTTGCTCTGTCGCAGA
CGGCGCCAAATAAAAATATAGGAGAAGCATAATAAAATAATCGTTGAGTA
TATCAGAATCGGTATCACGATATACTCTATGTCACCAACCTTGTCAGACC
GAAATGGATATTTGTTTGATTTACAGGATACATGTAAACGCTGGCTGATA
TATTTTTGATTACTCTTGTTGTTTTCTAATTCTTTAACATCAATTTTCAA
GTAATTTAATCTTTGANATACCGCTTCCAGATATCTACATTGACAAAGCA
TACAAAGCAAGGTACATTGTAGTTAGTATAAATGAATGTTAACTCGTGAA
TACTAGACCATGTCTTTAAAACGAACTAATGGATCTATCCACATGAAGTT
TGTAATGTGTTATTGCTTTACTTATACGATCGGATACGAACGATATCTTA
ATTTACACGATACCGATTCCATGTGACGTCATTTTCACCCACGACCAGTC
ATTTTTAATAGAAATGGTAGAAAGATTATGCACAGGATGGTTTAGAAACA
ACTTGATAACTCAAAGTCTTTAAATATTTCCCGTTTGGACCTGCACATAG
TTTTTTTGTTTCGAGGTGAAATTTATGTTAGTTAGGAACAGGCAGCTTGC
TTGAGGTTTGCTTGAAGATAGTACCTAACTGGATTTTGCTGAATTGGTCT
ATATGAATGGTGAACACTTTGACTCTGAAAAAATAAGGCCCAATTTTCAT
ATAATTTACAACCACCATATTTTTGTTTTCTATTCTAGTGGTGGCGATGG
GAACTTTGTGATTTCATCCAGTTTGACAGGTTTCACAGTGTTGCATGGTG
GTATGGCGCCAATGGTGGAAGATGGTTATGGAATCTTCTACTCCATTAAT
AAAGACAGGTATAAGTCAACCCAAATGAATAGAAAAATCATTTTATTCTG
CCTGTCTTTTCTACCTTAGGGAAACTAATTTTGGTGGGAACTAATTTTGG
CGGGAACTAATTTTCTCGGCTCATAAAAAATTCGAAAAATATCGAATTTT
GCGGGAATTAATTTTCCCGGTTTTGCCCTATTTTGGACACAATTATTTCA
TTTTCTAGGGATTTTTCAAATTTTTCGATGAAAAAATGGCCAAACTTGTA
ATTTACGGCTCTAAACTTATCTAGCTTCCGTACATGTTTCAATCTCCAGA
CACCCCGTTGACTTTAATATTAGACATTTTCAGGGCCATTGGTGAAATTT
TTCGTATTTTGCTGAAATCCAATTTCGCGAATTATGACGATGATGTAAAG
CATTGCTGGCTTTTCTTAGAAATTGGAGGGTGAAAGTTTTTATTTTTTTC
TCGTTTTACCTTTTCAAGAGAACATTAAGACGTGTGTCCTATAAATGAAA
GTAATCTTAAAACTATTATGTTAGCTATTTGAGTCACTTTTTTTAAATGA
ANTAAACATTATTTTTAATAAAATCTACATATAGAAATAATAAATGAGAA
ATATTTGATACTTGAAATGTTTTCACTTGTTTCCCTGGTAAGTTGCTCAT
ATTTTGACTTTTACTTGGCTTTTGTCTTTTATTAACATTTTTTGCAAATC
GTAAACTTCGTCATAATTTTAAAATACAAAAACGGGTTCAATAGAGAGTT
CAAAAATGCAGGTGTAAGCATCACCATCTCGTCAGTGAATTCAGATTCTT
CAGGGTCCGGTAATTTGCCTGTAATACTATAGATCGTTGCAAATATAGCA
AACGGAAGCCAACACACCAGGAAGCAAACGTTGATGGCAATTGCCAGTTT
GAGCAGACGTTTTTCTTTTCTGTCGCGAGCATCATCCGACGTCGTCCTGT
TATAGGACCCAGGGCCATTGGCAAACTTCTTTTTGCTCTGTCGCAGACGG
CGCCAAATAAAAATATAGGAGAAGCATAATAAAATAATCGTTGAGTATAT
CAGAATCGGTATCACGATATACTCTATGTCACCAACCTTGTCAGACCGAA
ATGGATATTTGTTTGATTTACAGGATACATGTAAACGCTGGCTGATATAT
TTTTGATTACTCTTGTTGTTTTCTAATTCTTTAACATCAATTTTCAAGTA
ATTTAATCTTTGAAGCTCATCTGCGCTCATCCACTTGACCGAGTTCTCGA
ATGTGAATTGCATGGTTCCATTTTCCATCATCTTACATCTTTTTAAATGG
CGTGAATAAGTTGTCCGAAGGAAAATGTTTTTGGTAGAGTTATACGGTTG
CGTTCCTTAGCGACATTATGTGCATGTTGTCCTTTGTTATAACAACACAA
ATGATTATTGTAGGAACCCATATAATAAAACATACAATGATTGCGTGTAT
ATTTTTCATGGTTCTGTGTTTAAACGGTGCCGCGGTAGCAAGAAAGCGAT
CTACTGTTAATGCAACGAGATTTAGAACTGAGAGTAGCAATGAAATGCGA
AACGCTACAATATAATTAATCTCCCACAAGGTGTCGCTATCGATCCACCA
TGTAAAGCCCATTATCAAAAAAAACGAGCCGCCTACTCCTACAAGTAAAT
CGGACAGTGATAGGTTAAGAAGATAAATGTTTGATTTCTGCCATCCATCT
TTTTTGCTCCGTTTGACGATCAAGACGATCTCAATCAAATTCAAAAATAA
AGCTCCGATAGAGGAAATACCAAAAACCACGATACAAACAATAAAAAAGG
AGACATTCATTTTATTGTCGTGGTTTCTTGTTGAAAACTAGTTGATAAAA
AACTCCGTGTTCCCTCTAACCACCGCTAAATAAAAAATCTATGCAAATCT
TTTCTCCGTTTAAAAGGTCATACCTCAAACATGTTTCAAACCAACTGAAA
AAGTATAAAATATTGATACTTTTTCTTGAAGAACCATGATGATTTTTGAT
TCAATGATTATGTATTCATAATACCAAGAATGATAATACTAGCGATATAC
GGCTCTATTCATCAAGTTAGAAAACCGAATAGAAAAATTTGAATTTAAAT
ATTGAATAGATGTTCAAATCGGTAGAAGCTATTGCTTTAATGCCAATTAA
ATACTTCACTTGCTTTCATGATGGCGTAAGTTACTTAACGTATCCAAACT
GAAAAAAACCTCTATAGTAAATAAATATTAATATTGTACCATGTGGACCT
TAAATGTTTGAAAATTTTTCAACACTCTGGGACTACTAGATTGCCGAGAT
GACGTGCATGCGTCGAAAATCGCTGTGTTAGAAAGTGAAAAATTGACACT
TTACTCCCCTCCCTAATGAGATCTTTACTTCTGGTCCAAATTTTCTGAAA
ATCTTGACCCTTTGAGAGAAGGAATTATAGATTTTCGTAATTTTCAATCC
TTTCAGAAAATAAATTTGCTTTTGCATTTGAATTTAGGTTTGTGATAAAG
TTACCCTTTCTCATAACGTTTGTTACTTAACTATGACGCAACTATGAGAA
TTTTTGTCGAAAAATGTTTGTTTTTTTTATCTCTAAAACATCCATTGTCT
TTAGACGTAAAATAGCGAATTCCCCAAAGTCAATAAGCGTAGAATTATTG
CTTTTCAAAATTCTAAACCAATCAAAATAGTACATAGAAAACTATGCTAG
CTCCCCCCCTCTGGCGACCAAACTGGTTGCTGAAGCCATTGCCATCAGAC
GGAAAGATCGAGATTTCGTCACCAGGTTTCCGGGCTAATCCGATGATCAT
CTACAAGGCGTGAAACAGTCTGTAATGTTTTCGGTTGTTTAAAGATTTTA
TTTTTACATACTCCTAGGTTCCAAATAAACGGCCCCCCCCGCTTGTTAAT
TTTTTGAAAATTTTCCAACCCCCCGGACCTTATTAGGACCCCCCGATTAT
TAATCTCTAAGAATATTTTCAGCTGTCAAAGAGAAGGCCCCTTATTTTGC
NTTAATTGTTATTTATTATGTTTGCCTTCTCTTAAACCACTATTCGGCAG
TTTCAGATAAAACCATTACCCCCGGGGACCCCCCGTTTATTAATTTTTAA
GAATATTTTTAGTTGTCAAAGAGTAGGCCCCTATTTTGCTCCAAATAGCT
TGATTTTAGCCTAAATTTACCTTATTTTTGGGTTTTCAGAAGTACAATTT
CCAACCCCCTGGCAATTAGGTCCCCCAGGCAATTAGGTCCCCCCCCCCGT
TTATTAAAATCTAGAAAATTTTCCAACCCCCCCGTTTATTTGGAACCTAA
GAGTAAGTGTTCCCGTTTCATATCAGACACATTTTTCATATCAGGATAGT
GCCTGCCTATTGTTACATTAAGATGATATAAGCATAAAAATGTTTTTCTT
TTCCTCGACCAATCTTGCTCCACATCCATATCAATCCAATGTCAAAAAGC
TTGTAAATTAAAATTAACGAGTAATCAAACGACATCACTCTTATTTAAAA
ACAAAACCTTTAAAGTATCTTTTCTTTTTATTCTAGAACTCAGGTTGTTT
TATCTTCATGGAAAACTTCACAGAAGACTGATCACTTGAAAATGTACGAT
GCTATTGTCTCATCATTGGACAAGATCAAAGAGCTCTGTCAACTCTCCAA
AATGTAGAATGCTTTTAGCGATGGTAGAACGTCCTTTTTGGGCTAGCATC
AATACTGGTCAGTATTGGTATGAAGATTTTTAGTTTTAATATTGTAAATT
ATCATTGAACACTAATTAAGATAGCTCATAATCAATGATTAATGATTAGA
ACTAGTTACTCTTGGGTGCCTAATAAACGCCCCTCCCGTCCACCCGCTTA
TTAATTTTTCAATTTATTTTAACCCTCGGGCCTTGATATTTTACAATTTG
GTCCCCCTTTTATTAGTCACCTGAGAGTATGATTATGCATCAAGGACATA
CTTTCTTCATTTTCTGCTTCAATCACTTCTTTGAACTTACCACTATATAA
ACCATGCATTTATCTTCTTCCAAACATTTATCAATACTATTCCACACATG
CGCACTACGTATATTTTTACTAACCTGTTTATATTGTTCATAATTCACTC
ATTTTATCACAACTTTCTACGCATGCGTTTTCAAATTCATATTCAGTTCT
ATGTTCAGTTATATCACACCCCTGTCTCACTGATGACCCGTTGAGAATTT
TTCACCGTTTGTAAATTTTCTTTTGTCCAAATATGGAGTATGTATCAAAG
TTGAAATTTTGGTGATTTTTATAGTATTTCATCCTAACCTTGATGCACAA
TGCTGGACTCTTTTGCACTTTGAGTACTCTACATTCAACACTATGTAACT
TTTTCAGGCTAAAATGCAATAATTAGTTAGTACTTCCTAACCAATACATG
TATAATCAATGGAAGCATATTTTATTACACATATTATTACGATATTATTA
TCATACAGAGGAAACCCAATAGAGCTATAATAGCATAAACCAGTCAAAAT
CTTTAGAATAAAGTAATGAAACCAAACCATATTGTGTTTAACCGATCAAT
TTTTAAGAAGCAAATGTGATCTTTGGTGTTTTATTTGGATAATGTGATAA
AAACCTTGCATTCTTAAAACCTTTGTAGAAACTTTATGGATTTTTTTCAA
TTTTTTGAAAACATTTTCAAAAATTTTAAGATTTAGAATTTTTTTTTTGT
GTAAATAATTTTGGATCATATTTTTTCTAACAGGACATTTTATTAGATTT
TGAAGATAATTGAACATAATTTTTGAATTCAACAAGGCACCAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015119XLOC_015119Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026925-exon-sc0000596-1575043694:143284..143560TCONS_00026925-exon-sc0000596-1575043694:143284..143560Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1575043694:142774..142904TCONS_00026925-exon-sc0000596-1575043694:142774..142904Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1575043694:142357..142480TCONS_00026925-exon-sc0000596-1575043694:142357..142480Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1575043694:141564..141642TCONS_00026925-exon-sc0000596-1575043694:141564..141642Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1575043694:141236..141283TCONS_00026925-exon-sc0000596-1575043694:141236..141283Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1575043694:140800..140822TCONS_00026925-exon-sc0000596-1575043694:140800..140822Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1575043694:135250..135272TCONS_00026925-exon-sc0000596-1575043694:135250..135272Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1575043694:134653..134772TCONS_00026925-exon-sc0000596-1575043694:134653..134772Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1575043694:129867..131124TCONS_00026925-exon-sc0000596-1575043694:129867..131124Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1510915933:143284..143560TCONS_00026925-exon-sc0000596-1510915933:143284..143560Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1510915933:142774..142904TCONS_00026925-exon-sc0000596-1510915933:142774..142904Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1510915933:142357..142480TCONS_00026925-exon-sc0000596-1510915933:142357..142480Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1510915933:141564..141642TCONS_00026925-exon-sc0000596-1510915933:141564..141642Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1510915933:141236..141283TCONS_00026925-exon-sc0000596-1510915933:141236..141283Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1510915933:140800..140822TCONS_00026925-exon-sc0000596-1510915933:140800..140822Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1510915933:135250..135272TCONS_00026925-exon-sc0000596-1510915933:135250..135272Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1510915933:134653..134772TCONS_00026925-exon-sc0000596-1510915933:134653..134772Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1510915933:129867..131124TCONS_00026925-exon-sc0000596-1510915933:129867..131124Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1491911889:143284..143560TCONS_00026925-exon-sc0000596-1491911889:143284..143560Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1491911889:142774..142904TCONS_00026925-exon-sc0000596-1491911889:142774..142904Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1491911889:142357..142480TCONS_00026925-exon-sc0000596-1491911889:142357..142480Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1491911889:141564..141642TCONS_00026925-exon-sc0000596-1491911889:141564..141642Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1491911889:141236..141283TCONS_00026925-exon-sc0000596-1491911889:141236..141283Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1491911889:140800..140822TCONS_00026925-exon-sc0000596-1491911889:140800..140822Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1491911889:135250..135272TCONS_00026925-exon-sc0000596-1491911889:135250..135272Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1491911889:134653..134772TCONS_00026925-exon-sc0000596-1491911889:134653..134772Clytia hemisphaericaexon
TCONS_00026925-exon-sc0000596-1491911889:129867..131124TCONS_00026925-exon-sc0000596-1491911889:129867..131124Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000596supercontigsc0000596:129867..143560 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.59137e-06	0	0.448044	0	4.3034	2.46711	9.57294	8.35958	0	9.91182e-05	6.39453e-06	0.000616378	0.897851	6.30282e-09	1.91459e-09	0	0.00926674	0	3.1423	0.00482537	0	0	0	2.56629e-10	3.02309	5.51598	0.000861146	5.35182e-08	0	0
Blast
[Close]
BLAST of TCONS_00026925 vs. Swiss-Prot (Human)
Match: OCTC (Peroxisomal carnitine O-octanoyltransferase OS=Homo sapiens GN=CROT PE=1 SV=2)

HSP 1 Score: 192.971 bits (489), Expect = 1.408e-52
Identity = 97/242 (40.08%), Postives = 142/242 (58.68%), Query Frame = 2 
Query:  200 PVEIVFTVDDTIRDYIKEAVXXXXXXXXXXXXXDKPIEHYGKAFAKTVRINPDTVFQMAMQLAYYSLNKSVCPTYESGTTRMFYHGRTETNRSCTVESKEWCEAMFNNQKTGPERLELFRKAVQKHDTLMLDACQGKGIDRHLFLLKKISEEEGIPLPDIYIDKAYKASGGDGNFVISSSLTGFTVLHGGMAPMVEDGYGIFYSINKDRTQVVLSSWKTSQKTDHLKMYDAIVSSLDKIKEL 925
            P E++F VD+ + + I +A   +   +S L +       +GK   K   ++PDT  Q+A+QLAYY L+      YE+  TR FYHGRTET RSCTVE+  WC++M +      ER +   +A  KH+ +M D   GKG DRHL  L  I++EEG+P+P+++ D  +  SGG GNFV+S+SL G+  + G + PMV +GYG FY I  DR  V  S+WK+  +TD  K+      +   + +L
Sbjct:  365 PEELIFIVDEKVLNDINQAKAQYLREASDLQIAAYAFTSFGKKLTKNKMLHPDTFIQLALQLAYYRLHGHPGCCYETAMTRHFYHGRTETMRSCTVEAVRWCQSMQDPSVNLRERQQKMLQAFAKHNKMMKDCSAGKGFDRHLLGLLLIAKEEGLPVPELFTDPLFSKSGGGGNFVLSTSLVGYLRVQGVVVPMVHNGYGFFYHIRDDRFVVACSAWKSCPETDAEKLVQLTFCAFHDMIQL 606
The following BLAST results are available for this feature:
BLAST of TCONS_00026925 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OCTC1.408e-5240.08Peroxisomal carnitine O-octanoyltransferase OS=Hom... [more]
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