TCONS_00026929 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026929
Unique NameTCONS_00026929
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length925

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026929 ID=TCONS_00026929|Name=TCONS_00026929|organism=Clytia hemisphaerica|type=transcript|length=925bp
TCCAGCTCGTGAACCTTGTACCTGGAAATTAGTATTGATGAAATTATGTC
GAAAACATTCGATTTACAATCCCAGTTACCACCCTTACCTCTTCCTACAC
TTCAAGATACTTGCAATAAATATCTTGATTCAGTGAAACCTTTTTTGACA
AAAGATGAATTTATGGAAACAGGATTTAAAGTTGAGCTCTTCCAAAATGG
AATCGGAAAAGAGCTTCACAACAAGTTGATGCAATTAGCAAAACATTCTA
AAAATTGGgctcaagACAGATGGTATGATAGTTATTTTGATTACAGAGGT
TCCAACCCAATGATGAGTAATATCTCAGGTGGATATGAATCAAGATTTGA
TTTTGATCAGCCCTGTCATGGCCTTGTTATAGAGCGTGCTGCCAATTGGA
TTCACTCAATGACGACTATCTATCAAAGAGTGGTTAAACAAGAGGTTCCA
GTGCAAAAGCTTGGACGTCAATTCCCAATGGATATGTCACAATATGCTAA
CTTTTTCTGTGGAAGTAGACTTCCTGGTGAAAAGAGAGACACCCTGATGC
ACAATATTCATTTACTACCCCAGCCAGATGGCAGTATGCACGTAGTAGCA
CCAAGCAAACACATTGTGGTAATGAAGAATGCTCACATCTTTCATGTCAA
AGTTATTGATGATAACAATGTTATTCTTCATCCGAAAAGCATTCAAAGGC
AACTAGAAAGGATTCATGAAATTTGCAAAGATTTGGAGGAAGGAGAAGGT
GTAGCAGCACTAACAATGGGCACCAGAGATAAGTGGTACAAGGCTTACAA
ACATTTGTGTATATTGGATCGTCAAAATAAAACCAACATCAACTTGATCA
ACCAATCCATCTTTGCATTTGCTTTTGAAGATGTTGAAACTCATAACTTA
CAAGAGGTAAGTGATTAAAGACGGT
Run BLAST on NCBI

transcript from alignment at sc0000596:145990..160829-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026929 ID=TCONS_00026929|Name=TCONS_00026929|organism=Clytia hemisphaerica|type=transcript|length=14840bp|location=Sequence derived from alignment at sc0000596:145990..160829- (Clytia hemisphaerica)
TCCAGCTCGTGAACCTTGTACCTGGAAATTAGGTCAGTAGGGTAGGTGTG
ATTGATGTCTGAGATTTGAGGTAGGTTATATATATCTATCTGTTCAGAGG
CCCTTCTGATGGAATTTCCTCATTTTCAAAAGAAAAAAGTCTTGCATTCT
AAACCTATGTATGGCTCAAATTTTAGACAGTCTGAGGGAAATGTTACGAA
AGCATCCACCGTAGGGGGACTTCAAAATATCTGTTCTGAAGGCCACGTCA
GTGTAGACCTAAAGCTCTAAAACAGCATCTAATAACATGAAAACCAGAAT
ATGATTCTTCAATGGGAATCAAAACTATAAAGTGCACTTACAAACATCAA
TTTGTCAGATATCTAACAAAATTAATAACTGCAACTGTCATCATTGACAT
TAAAACAAATGATTTTCTGTCAAGAGCCTTGTAAACATTCCAACAACTTC
CATCGAAATGATCTATCACAGCTCAGTCTACCATTTTTAGCGCGGTCCGA
GGATTGAGCCGAGACCGCTCCGCGAACTCCTGCGCGGGTGAAAACTTCAA
TCTGTCAATCATTTTCTCAAGCGAAGAGGACGCGAAGCGATTCTAGCTTT
ACGATAGTGCCGCGGGACATCAATGGATAGTATTCAATCATCATTATCCC
TTTATTTTCATTCCTAGAACTTTCGCAAAAAAAAAGGAAAAATAGAAAAG
GTGTATTTTTTACTGCTCTATTCACATACTGAATTTGAAAGATCTTCTAT
GTGGCGTTTTTTTGCAAACTTCAAAAAACTGATTTTTGTTCCGCCTTTGT
GGGACTTTGGCTTAAGTGCTTGAGTGCAGCATAGGGTACAAAGTCCAATC
ATGCGTTTCCCGTAATTTTTATATGAAGAGTTAGGTCTATACTGCACGTT
CCAGCTGGAAATGGCGGTCTGTTCTTAGCAAACTAAAGAAAAAAGTCTGC
TGGAAAACAGTTGTCTATTCTACTGAAGATTGGGACCAGCTGGAAAAATA
TGATCTGTTCTTTCTTACAAAAAAATAGTTTGATATCCAAAAAATAAGAT
GTCTAAGAATTTCCTATCTGTTCTGAGGGAATTTCAAAAAAGTCAAAGAG
TCTTTGAGATCTGTTCTTTTCCTTCTGAATGTGGTTGCCTGGAGTGCCAG
CTGAAAATTCTCTATCTGTTCTACAAAACATCTGAAAATTGTCAATCTGT
TCGCACAGATATTTAAAGTTAAACTGTTAGCTGGAAATTAAGTTTCTGTT
CTTAAAAGTCCTTCAATGTCGCGCTGGAATTTAGCGATCTGTTCTTATAA
GATTTTATCAGCCCTGGTAGATAAGAACAGTTAACTCGCATAAAATCAAT
CGCCTGGTAAATTCGTACCTGTTCTGAAAGTTTTTTTACCTCCTAGCTGG
AAAAATATATCTGTTCTGAAGTAAAAATTTCTCTCCTGGAAAACAAGGAA
CTGTTCTTAACTTCGGGGAAATCCTTCCAGCTGGCAAATAAGCAGTGCGT
CACAAACAGCCATATAAACAAAAAGTTGTCTTTTTGATTTCCCAAACATT
CGTCTAAAGCGTTCACTTCCACAATAATTTAGGTGATTGCAATTTCGTTT
GAGACATGTATCACCTTGGGTATAACAAGAATTGATGAAAATAGCGTCAA
TGGGATTATATTTTATAAATGTTTTAATATTTTTATCCCCTGCTTCGTAT
TTTTGATAAAATGACGTCACTATTNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAA
AAAATTTAGCCCGAAATCCTTGGGGGATAGGTATTTTTAAAGGTTGGGGG
GGATGCCAAGAAGGGGGGGATCATTTAAGAAGGGGGGGATCAGACCCCTT
TCCGCACTATGACTAGTTGGAATACTTTCTTTTACTCGCGGGATTGATGG
TAACTTTTCATCTTTGTTATTTTAAAAATGAAGCACAACCGAAAAAAAAC
GAAACTTCAGAAAGTTGCGTATTTCCAGTGAGTAAACGATTCTGACAATT
AACAAAATTGATGATGATGATTTTTTTTCGGTCGGTTCTAGTCTTGACCC
CTAAACCTGCGCGAGATTGAAGCGTTTGGGTAAACGAGACAAAACTCCAA
AAAAGCTGGTGTTTTGAAGCGCTTCCGTGCGATCGAAATATCGCTGTTTG
TGACGCACTGATAAGAACATATATTTGCAAATTTTAGGTCAGTGGCTGCT
TCTGATGTTACACAGGAGGATGAGCAGCGGCAACTTAACTGGGAAAAGTT
TTGTAGTAGTTGCTTGAAGGCAGCAGATCTCAAACCTCAAATCTATGCGG
AAGATATCCTGCGCTCACGCCGCAATTTCCAGACTGGAATTTTAGGCCAG
CTAATTTTTCATAGTTTTTGAAAATTTTAATTTCATTAAAAAAAGCACCA
GTTTATATTTTCATGATGGATATCATCCCCCCTTTGCTTTAGAAGTTTTG
CAGCGCAAATTTTGCTTTGTTTTGTGAGTCAAGTAGGTAAAAGATATATA
TATATATAGCGCTTTCCACAGCATAAATTTTTTATATATGCATTTCCACG
GGATGTGTGACAACGCTAATTGTGACTATAAGGCGGAGGACCCTGCCGAC
GCACCGGACTGTCCGGTGTATTTGTCAAGTGGCAAAAAGTATCCTTTCGC
TACACCGGACGCAATAAGTCCGGTGTCAGTCCGGTGCTGCATACAGGGAA
TTTTGGACGCCGGACATTTATATGAAACAAAAAATTAAGAAACAAAGGAC
GCACCTGACTTGTCATGTCCGGTGGAAAAAAATTTCCTTCTCCGACACCG
GACATCCAACTTCCTTAAGTCTGGTGTAGAGATTGTCCGGTGGTAAATAA
ATTCTCATTTTACACCGGACCTTCGCGTGTCCGGTGTTCGTTAAGTCTGG
TGCGTCGACAGGGTCCTTAAGGCGGCAATCACAAATATCTTTGTTTCGCG
TTGCCCGACCAACTCTCGAAAATTGAGTAAAATTGAATCGGTGAGTCGGT
AAATTTGTCGGAATCTTTCTGTCAATGACCTTCCCTTCGTTCAAAAATTT
TATTATTGCCGGATTTTTGCGAGCAATTTCTAGCGCATTCGCAGCATTTG
GACTTTTTATCATTACATGTGCCATTTTGGGGTCAGAGGTCACAGTGTTC
AAAGGACATAATTTTAAACCACCCATTACACCCGATTGTTTTGGCGGCTG
GCTGGCTGGCAGTTTTCTCCAAGAATGCACTCTAAAAATGGATGGAAAAA
TGGAAACCTGAAAATTTTTACGACCGACTGACCGACCGACCGACTCACTT
TTTAGACCCAACGAGGACGCGTAATGAAGATATTTGTGATTGCCACCTAA
CTGACTAAAATTCCTATATTAGGCGCTGTGGTATAATACCGTCAACTGCT
CCAACTTGGGACTATCTTACGCAACATGGGACGGCCATCCCACCACCATT
TCACCGAACCTCCAAAGTCATTTGATTTGAGTTTAATGAACCGCGTATTA
AAAAATACACAATTTCTCTTTCGTATCGAGTAGGCTTTTAAATTGAAATA
TGAAAGAAGTCCGTAGTGGAACACGCGCGAGTGTCCGGAACGAAGAAGAC
CAAATTAGTGGCAAACGATGGAGTGTTTGACGTCACTCACGCGGCAAGTT
ACACACTCGCTATTTGTTAATCCCATTGGGCAGTAGGCGGTTAGGCGTCA
GGCGTTCTCTAATTCTCCATTCGGCGTCTGGTCATTTTGAATGAAAACAA
AAGTTAAAAAAGGCGCGCTATCAGTATATGTTATCTAGACATGTTATGAC
AGAAAGTATGATTGATAAACTTGGTGGAGTTATGAAAACAAATTTGTTGT
TGATGAGAAAGTAAGTGAAAATACAGGCCAGATATCAACAAGTCCCATGT
TGCGTACACTCGTCCCCAAGTTGGAGCAGTTGACGGTTGTCAGTCATAGA
AATCCTTGCATTTGGACCCATTTGCACAGTTTTCGGCAAATGGAACGGGT
CGAAAACGATAGTGACGAAAAAACCCTGTGCAAATATATACACTCAATCA
CTGCGACCCCTTGCATTTACACAGAGTGAAAAATGTCTAATTAAAAAATG
CACAGATCAAAATTTTAACCCCTAGACAAAAATTTTCTAAAAAGGCTAAA
GAATCTTCTAAAGAAAAATGAAAATGCCATTCGTCTTCTTTTTATTTATG
CCATTTTCATTTTAAAGTTGAGATTCGTTAATTGTCGCGCATTTTGGCTA
ACACGTTCTAGCTCATTTGCACAGGGTCGGAAAAAATCTTTGAAACTGTT
GCAAATGCACACCCTGTGCAAATGCAAGGATTTCCGTGACTGATAGTGGT
CATTGACCTTCAGACTTGGCCATGAATGGCGTGCGAAAGCACGCGCACGC
GCTGGCACACGCGTAAAATGATTTACGAGTGCGAAAATAACACGCCTAAA
AAGGTTAAAAAAAGTCCAAGGCGTGCGATTTAAGCACGCTTAAAACACTC
TTTGAAAATAATAGCACGCGCGTAGTAAAAATTATTCTCAACAAAGCAGG
TAAACTATAAATAGCTTATATTTGCTTCTCTCTTGTGATTCCCTTTTTAA
TGCCCCATACTTTCTACAAATCTCTCTTCTCTTTCATTTGAAAGTTTTTT
TTTCACTTTTGACGTCATAGGTTTTTATCCTACAGATTCGTGAAAGGCTT
CTCTTTTCTCTTTTATTTGATGGTTTTTCTTTTACTTTTNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTATGTCTGATCTTTC
TTTGTGTATACAAGAAAGAAAAATATTTTACTTTGTGTTTACACAAGCTT
TGCATAATAAATTAGTTAAAGAGTGGTTGGAGACTATTTTTACATGAACT
TGTTTTTATATTTATAACATCCCTGTCTCAGTGATTCGGTCCCAGCGTTG
TTTTAACGTTCATCTAATGTTCTATGGACATTATGAACGTTAGATGGACG
TTGATATAACGTTGTGTGCTAGCTGAAAATTATTCAATCGTTATAATAAA
GAGAATAAGTTGTTAGTTAGCATTAGCCTGAGAGACTCCATACCACGAGT
AGACCCCTTCTGAGGTATACATCTGATCAATTTCTTATCTTAATTAGTAA
ATATTAATAGCACGCCATAAAAGTTTTAGGCGTGCTATTATTGCACGCCA
TAATATAAGTTAAGATTTTAGGCATGCGATCGTAGCACACGCACTGTTTT
ACTCATGGCCAGGCCTGGACCTTGGTTGCTGCACAGGTGACTGAGGTTCG
ATTCCCACTTGCAGCGGTTCACTTGGCAAGTGAATGAACCTTCGCCCGGG
TCAACCCATGCCATGTGAGGGGAATTGGGTAGTCCTGGGTGGGGTGTGCT
GATGGGGCGCTAATTGAAAGCGTCTACTAAATCTCCTATATCAAGATTAT
GGAAATTGGAGTGCAGGCCGATTATTACTTTCATTTTCAGTGGTTTCATT
TTGGATTTCAAGTCAGCATCTTAGCAACAGGCAAACATAGAAAATTTTCC
TAATCACCCATTTCGATGAAACCAATACCGTCAACTGCTCTAACTTGGGA
CGATTGGTCGAAACATGGGACTGTTGCATATATGGTCTGTATTTTCACTT
ACTGTAAAATCGAAAGAGAAATCGTGTATTTTTTAATACACCAATCCTTA
ACTCAAATCAAAAAAACTTTGGAGGTTCGGTGAAATGGTGGCCGAATTAC
CGTCCCATGTTTTGTCAGATAGTCCTGGATAGTCCCAAGTTAGAGCAGTT
GACTGTAAAAGATAAAACTTCTCTATATTTCACTTTTTTGCACCAATTCT
TCAAAATGAAAATATTTAAGATTTTAAGTTCTTCTTTTATTCAATGATTT
TTTACGGCACTTTGTTGGCGATCTAACTCTTGCATCGAATTTCCACCTTC
TTCAGAGAATTGAACATTAGGAATAGTGTACACCATAGGATAACGGATCG
AAACAAATATTTTCAAAGGTGTTATGAAGGGTGAGATTTTATAACCGCCG
TGGTACAAGGCACTGAGAGGCCATGCAGTTATTGGAAGTACTTCGATTTG
TGAAGTGTCTTTACGTCACATAGAACAAAAGAAAATAGCAAAAGAATAAA
GTAATTACCCATAGCCACCATTTTGCAACCATGGGGGATTGTAATTTTAC
GGAAATGGGAATCCTCATATCGAATAAAGCATCTTCTGAAAATTTCATTC
TTCCCCATAAATGCAAAAATAAAAAACAAAGAAAGTTTCGTTTTCTGATC
TTCTTTTTAATCTGCCATGAAGTGTTATAAAATTCCTTATAGAAAGACAC
ATTCTCCTACGAAGAGGCTTCAAAAAAATGACGTAGAAAAAAGTTGTGAA
AAAGTGTACTGGAGCCTTATCCGGGTGCTTGCCTAGCAGACAAATAAGAC
ACAGTGGGTGAGTGAGTCTAGACTACGAAAGGGGCGGGCTAAAGGAACCT
AGGGGAGTAGAACCTAATCCTATTGTAGACAAGTAAGGGAGACTATGCAG
TTACAATAAAACTAATATTTAATAATGGCAACGCTCTACAATCGTGCTAC
AAATATGAAAAGGATACTTACAAACCTATGTCCTGAGCAGGTCCGTCGCC
GATTGCTGCCGAAACAACACTGAAGTTTAGGAGGGCTGGACAGCAATTGC
TAAGTTGCTGCCCAGTGGAGCGTGGAAGGCGCAGTTGGGCGTTAGAAGGG
CGCTAGATACGATCAGTAAAGGTATAGCCGAAGGAACTTTAGTACAAAAG
TATGTCATTTTATCTTAACAATTTCGTATAAACTACGTCACAACCACGGA
GCGCTGACTTTTAGTTTTATGGTCCTTGTTCTCACTCGATTGGTTTCCGT
AATGAAAAAAAAGTCGTTATTGTGAACTTTGAATATGCTTAAAATCGAGG
TACTTCCACTAACTGCCATTGGTGCCAAAAAGAAGGGTCATATGGCATAT
GAAATATGGCAACCTCATTGGTGGAAATTTATTAAACAGTCTGCAAAGGA
GCGCTGCGAAGCAATCAGTAGAAGAGACCACTTTCGTTTTTGTTGCAGAT
TTCAATATAAATTTCTCACAGGGATAACTTATTAATGTGTTGTGTCAACT
TGTCAGCATTGTATTATTGCAAAGGGAAAGATAAAAGAGGTCAGACTAGC
CTAGTTTCTAATCCTGATATAGGAGTTTAAGTCTAGACTGCCAAGGATCG
CTGTCACGGACCATCTACATTAACACGGCAAAACAGTGGGCCGTTTATTT
TCAATTTCCAATAGATTTGATTTTTGCCTGACTCATAGTTTGAAAATTCT
TCTTTCCGACGTTTTATTTGCCAATCGACCGACTGACTCATTTGTTTGAC
CTAAAATTATGTGAACACAAGTTATTTGTTGTGATCACGGTCTTAACTTA
TTTTTAAAAATATTTTGAACATCAAAGCCTTTTGTACTGATATAGTTTGT
TTGTGTATGTAAGAAACAGTCATCACATAGTGTTTTTCACCGCTAATTCA
TAGAGCCAAAATGGTATCGTGTCTAGAAATTGGATATAAAATAATATAAA
CCCTCTCTGGCCACTCTGCACAAAAATGTCAACTACAGGCTTGATTTAAA
AGTTTCACAATCATTAATTCTGTTTATCCTTCTGTTTTTAATGCATTATT
AAAGGAGGATTTATTCAACCCTATTCTAGGCTTTTAGGGGCGGCTTAACA
CTAGGGGGGGAGGCTGTTCCTGTACCACCCATTTAACTTTTGATCTAGTG
TGTCTTTTTGGATGAAATTTGCCACAGATTCTTGTGGAATGTAAGGTAAC
TTTTCACCAAATTTTTTTTGATGACACTCATCATGCCCAAAGTGAGTAAA
AACCAAAAATTTCCTTTGTTTTATAAAGAGCTATTGTATTCTAACAAAGG
CTTTAGAAAAAAGAACTTTCCCTGAGTCTAAAATGCTTATTTTATCCTAA
ATATTCAATAAATTATAGTTTAAACGATATATTTGACATAAAAAATGACT
TTGTAGTGGAAATGTGACAATTTTTGTCACAACTTACTGTCAGTAATGTC
ATCATGCTCAAGGTGTGAAAATTTTTAGGTTTCGATTTTTTATTTATTTT
GAAGCTAAAAGTTAGAATTTACAAAAAAGTTCATGCCAAAAACTCTATTA
TTTCAGGAGCTATTTAAAACATTAGTTTCGTCCCCGAACAGAAACAATCC
CCCTCGAGTATGAATAAAGTTAATTTAAAAAATTAAGGAAGATTGAAGCT
CAGGGGAGGAAGTCAGCTGTACCCCATCCATTTTTGGTCAGTATGCCTAG
CCTACTTTTTCAAAGGCCCTGCCCATTAAAAAAATCGTTTGGCTTGTGTC
AAGAAAATAGCTGAATGGGCAGGTCAAAATGTCAAATATCTCAAAAATGA
TTGAAATTAACTTTTTCTTTCATTTCATAGTACAACATTATATATTGAAT
ACAAACTTCACAACTTAACTAGTCAATAGTAGTAAGAGTAAGTAGTTTTG
GACCTGAACCTGTTTTCAAATTATCAGTTTAAGCATGGAATCATTATAGA
CACTGTAAAAACAATGATTCAATGATTTTTATCACTTTCTCATGCTGAAA
CCTTGTCCATTAATGGCATTATTGTTCATTGACTTTTCGTAGCATTTTAA
TTTCATTTCTCATCAAAACGCACTTATCCAGTTTCCAATTGAGACTAAGC
TTTCCTTCAAGAATCAAACTCAGCTAGTTAATTGCTAATGATATGTCGTT
ATGACGTTTTAAGTTGCAAGAAAGATGCAAAATAACCCTATGTAAAAGTT
GTCTTTTGCAGGAAAAACCTGTAAATCAATTCTTTTCTGAAACAATGGAA
AGACAATACTTCGATCTCCACTGTTTTTGTCTCTATAATAATTCCATGGT
TTCAGTTAGGTTTCAAGATATGTATCTTGAAAAAAAGACAGAATCCATAA
AATGGTGACTCTTATATTGGTATTATTGTTCAATAATGTTGGTGGTGTAA
TGAATTTGAATTGATTGAAAATTTTACCAAAATTCCACACCTCTTTGTGT
TCAATCCAATTTATGGCCGGCCCAATTTATATGCGATTATAGACTTATCC
ATACTTTCCCGATTCTTAAACTTTCTGTAACTGTGAAAACACTAAATTTT
TGTCCATGGCTTTTCTCATAGTATTGATGAAATTATGTCGAAAACATTCG
ATTTACAATCCCAGTTACCACCCTTACCTCTTCCTACACTTCAAGATACT
TGCAATAAATATCTTGATTCAGGTAAGGTACATTTCATTCATTCTCTCGG
TTGTTGGTCTCTAATATTTTATTTGTCACTTTTTCCTACTAAATAATCAA
AGAATGTACAATAAAATTGCCTTCATATCAATAATCGTGATGTCAGAGTG
CTCCTTACATTGATTTGCACAAGACTCGTTTGAAACATGCTCATCTTGTA
TAAAATTTGCTTCCAAGAGTTAGTTTATTTGAATTAAAAATTTGAATGGC
TAGAGGTTAAAAGTACATTGGATTTCTAAACCTTTTTAAGGAAATAGAAA
CAGGTTATCCAAAATTTGAGGTAACTCTTGGATAGGAATTTTATACACGA
TTAGCATCGTCAAAACATATCAGAGGGGATGCTAGCAGCCAGTTGCATTC
TAGGGTGTCTTTATGTGTGTGCAAAGTGAAAAGCATTGCTGGTTAAATAA
ATCCTTCTATTTCTTTTTATAGTGAAACCTTTTTTGACAAAAGATGAATT
TATGGAAACAGGATTTAAAGTTGAGCTCTTCCAAAATGGAATCGGAAAAG
AGCTTCACAACAAGTTGATGCAATTAGCAAAACATTCTAAAAATTGGGTA
TGAAAATCGTATTTGTTCTGATATGTTTATTTTTCAATAAAATACAGTGC
TCATAACGTGAACCCCACTGGATTCTGAGGGGGGTTGAGGATTTTTAATT
TTTTTTAAATAGGCTGGGTTTGGGTTGATGAGAAAGTATGGGTGGGGGTA
ATCCTATTAAGGGTGACATTTTTCAGGTGGGGGTTTCTGTTTTTTTCTTC
AATTTTTTTACATAATATATACTAGAGAAAAATAAAAAATAACAAAAAAA
GTAATGCAAGGTAAAATCTCATTTTTCTCTAGTCTAGTCTAAAAGCTCAA
ATCCCCCATTTAAATAAAAAAGTCCCATCCCTCCCTATAAAGCCCTTCAT
GAAAATTTGTACCCCCCTTGAGGAGGGGAAAAATATTAGCTAGAAAAATG
CCAAACCCCAATCCTTGCTATCCCACTCAAGATTCTTCATCGAAGTTTTC
AATTCTACCTTTCTGTTTTCTTCGTAAATGCCTTTCTTAAACTTACAAGA
GTTGTTGATTAATATGAATACTTTGAACATGAAAAGTTGGCTTCTTATTG
TAATTAATTAAAGCTGCTTTTAATTCTAAACTATGTTGTTTTTATACATT
TTTAGGCTCAAGACAGATGGTATGATAGTTATTTTGATTACAGAGGTTCC
AACCCAATGATGAGTAATATCTCAGGTGGATATGAATCAAGATTTGATTT
TGATCAGCCCTGTCATGGCCTTGTTATAGAGCGTGCTGCCAATTGGATTC
ACTCAATGACGACTATCTATCAAAGAGTGGTTAAGTAAGATATTTTTTTT
AAGAAAATTTTTTTTATGACAGAAAAGCATTACTAAATAAGTGATAAGGA
TAAAGACAAGGGAAAAGTTAGGGGGAAAAGCTAGAAGGAATAATTACAAA
GAACATCCCTGGTACTGGCTTATGGAAGTCAGATAATATAATTATATCAT
TCCTATAGACAAGAGGTTCCAGTGCAAAAGCTTGGACGTCAATTCCCAAT
GGATATGTCACAATATGCTAACTTTTTCTGTGGAAGTAGACTTCCTGGTG
AAAAGAGAGACACCCTGATGCACAATATTCATTTACTACCCCAGCCAGGT
ATTCGATTCATATCTTTATATGATGAAATTATTTCTTTTATCAATGCTAC
ATACTTTGTTAATACAAAAAAATAAAAAAACTACTTCAAAACTTTTGGGT
CGGCAGGTTTCAAGGTATAGTAGGGTCGATCGAATGACGACAAACCAACA
TTTTTTAACACCAGCCTGATGAACTAATACAATTTGAAATTTTCTTTTAC
ACTTTAGATGGCAGTATGCACGTAGTAGCACCAAGCAAACACATTGTGGT
AATGAAGAATGCTCACATCTTTCATGTCAAAGTTATTGATGATAACAATG
TTATTCTTCATCCGAAAAGCATTCAAAGGTTTACTTTTTTTCCTAAGCAT
TTTTTCTTCTCAGTGTTTACCATGATGAAATTTTGACATCAAGTTTTCTA
TTCATGGCAATGTTCTAAAGGTGTATTGTAACCAAATAATAAAGTTAAAG
ATATGGGTGTTTCCTGATTGTTTCATCAGTATTATTATCAATTTATACAT
GTATGACATGTTTTAAAAGAATCGATGTGAATTTTTCTTTTGCCTCGTGA
TATTAGCAATAACCTTTGGTTCTATGATAATGTATCACTGTAGTTTTAAG
AATTCAAAAGGTAAAGGTTTTCTTACATACATCGGAATGAAGTTATGAAT
TGTTGAAAAAAACGCTTCTAAAAGAATAGGTGATCACAGATGAATATATT
TGTGAAAAGTCGAGTTGAGTTTGTCATATTTCCAAGCAGAAAACCATCAT
ATTTTCAAAACTATAGATTAGCTTTATCAAGCTTTATCTTTATCAATGAA
AATTTCAGCATATGGTCTTCACCTGTCAATGTTTAGGCACATTTTTTGGT
ACCTAGTATTTGGGTTTCTATATTTTATATTTGAACTCTTTTTCTTTTCT
GATAAATATCCTAGTTGTAAACTCTTTTAGCTGACTTTCTTTTATTTATA
GGCAACTAGAAAGGATTCATGAAATTTGCAAAGATTTGGAGGAAGGAGAA
GGTGTAGCAGCACTAACAATGGGCACCAGAGATAAGTGGTACAAGGTAAT
AATCATACATATCTTATATCTTACTATACTAAATGGGTTTATGAAAAATG
TGTGTAATACAAGATGGTAGCAAAGCTGCAATTTCGAATGGTTTGTTAGG
GGGTGATTCGAGTATGAAAGAGGGATTCGTGCAGTTTTGAGACAAAAAAA
TCTTATTGTCTTTCGAATAAGGAGTTGATGATACGTAGTGGTTTTTATTT
CATTTTCATCTATGATTGAGCGCAAAAATTAGCACTACCTTCCGATAAAA
CCCCATTCCAATTAAAAGGATTTATGGTTCGAATCGAAGAAGCCCCTACA
TACAGTGACTTTTTAACGAAAATAATTCTAACGTCAATTATTCGAAAAAT
CATGTGACGTAAATTTTCGAATTTTAGAAGGCGTGGCACTTTCTACGAAA
AAGTTGGTAAATCTTTTTGATTAATTGGTAAAGTTTTTAAATATTTAGTA
CGCAGATAAAAAACGGAGGTCTTCCGCGCGAGAAGTGGATATAAAAATGT
TGTCCTGTAAGTTCGGATATGCCCACAATTGTTTTGAAATCAAAGTATCT
ATTATTTTGTTTTTGAAGTGCGCCATTTCGACCTCAAATTCGCAAATACA
GCTACATTTTTTATATCTTTTCTATTCTTATACACTGATGATACATTTGA
CGCTCTCAATTTGGCGTTTTACTGCTCAATAAGCTCCCGTTTTCGATTAA
ACTAAAATCGCCTTCAAACTTCCTGAAAAAACTCTCATAATTGACAGTTT
ATTGTTCACTAAGCTAATTTTATGGTGAAGATTTCAAGTAACATTCTCTC
ATTCAATTTGAAGCATAAAAAGGTATTTACGAGAAATCTTCCAACTACTC
GATGTACTCCTGTGGTTGATGAAAACTAATTCGAATTCCCCTTAAAAATA
AAGTTAGAGAGCATCAACAATACCATCTTTATCATCCTAAGGACTTTTGA
TGCAGAAGTTAAACTGGCGCTTGCGACGACGGGAACCGTCTAGTAAAACA
CTAATGCTTTAATAATACAATAATGTTATAATTTAAAACACTAGATAGAG
CTACTCTGTATTTCCCAAGCAACGGCAGGTGAAACAAAAACATGTGCCAT
CTTTGGTGAAAGTAGGTCACAGTTCGGTACAATTTATTCAACCAAAGCAA
AAAAAATCTAAAATAGGCTTAATCGATCAAATTGCCGTCGCCGAACTATG
GTCTACTTATCAAAGATGGTGGATAATTTGATTCAAAAAGAGACGGATTA
GCTCTATCTAGTGTTTTGTATCACAAAACAAAACTCTATAAAAATCGAAT
TTTCAAAGAAAGAACACCAGTTGCAAAAACACCATCAGACAGACAACACA
CGAGGTTGACAGTGGTAGTTCCCTCACGTAAAAACGCTTACCGCGCCCAT
TGGTTTATCCTTGGAAGCAACACAACATCAACTAACAACATCGACAAATA
ACAACTTATACAAGCAACTATAATTTTAAGAAGTATACAAAAACAACACC
ATATATCAGATCCTTTTCATCGTCCAATATATAGTGTTTTATATAAGATA
GCTGTGGTAATAATGTGAGCAAACAAGGTCAATTTTTCCTAAAAAGACTT
AATCGCCTTGAAGTTCTATGTTAAGAACGTTAACATCCCCTTTCCAGTTT
CTTTGATAAAATAAGGATCACTTATAATGTGTCCTAAATTAACTATTCAG
ATTTTTTATTAATACAAACCATTTATTAATTACATAGCAATTATCTTCAT
TAGTTAAATTTATTTTGGTTCAGAGAAAACATGTAGTAAATTCCAACTAT
TGAGTCAGTTACCTATACCTTATTACCTCTACAATATAGTACTTCTTGTT
TTTACAGGCTTACAAACATTTGTGTATATTGGATCGTCAAAATAAAACCA
ACATCAACTTGATCAACCAATCCATCTTTGCATTTGCTTTTGAAGATGTT
GAAACTCATAACTTACAAGAGGTAAGTGATTAAAGACGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015120XLOC_015120Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026929-exon-sc0000596-1575043694:160798..160829TCONS_00026929-exon-sc0000596-1575043694:160798..160829Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1575043694:150708..150808TCONS_00026929-exon-sc0000596-1575043694:150708..150808Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1575043694:150133..150257TCONS_00026929-exon-sc0000596-1575043694:150133..150257Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1575043694:149346..149524TCONS_00026929-exon-sc0000596-1575043694:149346..149524Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1575043694:149032..149171TCONS_00026929-exon-sc0000596-1575043694:149032..149171Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1575043694:148702..148822TCONS_00026929-exon-sc0000596-1575043694:148702..148822Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1575043694:147985..148078TCONS_00026929-exon-sc0000596-1575043694:147985..148078Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1575043694:145990..146122TCONS_00026929-exon-sc0000596-1575043694:145990..146122Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1510915933:160798..160829TCONS_00026929-exon-sc0000596-1510915933:160798..160829Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1510915933:150708..150808TCONS_00026929-exon-sc0000596-1510915933:150708..150808Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1510915933:150133..150257TCONS_00026929-exon-sc0000596-1510915933:150133..150257Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1510915933:149346..149524TCONS_00026929-exon-sc0000596-1510915933:149346..149524Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1510915933:149032..149171TCONS_00026929-exon-sc0000596-1510915933:149032..149171Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1510915933:148702..148822TCONS_00026929-exon-sc0000596-1510915933:148702..148822Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1510915933:147985..148078TCONS_00026929-exon-sc0000596-1510915933:147985..148078Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1510915933:145990..146122TCONS_00026929-exon-sc0000596-1510915933:145990..146122Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1491911889:160798..160829TCONS_00026929-exon-sc0000596-1491911889:160798..160829Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1491911889:150708..150808TCONS_00026929-exon-sc0000596-1491911889:150708..150808Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1491911889:150133..150257TCONS_00026929-exon-sc0000596-1491911889:150133..150257Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1491911889:149346..149524TCONS_00026929-exon-sc0000596-1491911889:149346..149524Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1491911889:149032..149171TCONS_00026929-exon-sc0000596-1491911889:149032..149171Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1491911889:148702..148822TCONS_00026929-exon-sc0000596-1491911889:148702..148822Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1491911889:147985..148078TCONS_00026929-exon-sc0000596-1491911889:147985..148078Clytia hemisphaericaexon
TCONS_00026929-exon-sc0000596-1491911889:145990..146122TCONS_00026929-exon-sc0000596-1491911889:145990..146122Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000596supercontigsc0000596:145990..160829 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	1.3081	1.96376e-08	0.0514128	0.0281008	0.0567023	0.000651046	9.21583	12.4243	7.92648	3.21673	5.66379	9.98743	1.75952	1.02409	5.59446	1.64747	4.13521	3.61196	3.10775	2.35605	0	2.41994	0.038694	0.0211036	0	0.00747311	0.604351	0
Blast
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BLAST of TCONS_00026929 vs. Swiss-Prot (Human)
Match: OCTC (Peroxisomal carnitine O-octanoyltransferase OS=Homo sapiens GN=CROT PE=1 SV=2)

HSP 1 Score: 142.51 bits (358), Expect = 6.773e-38
Identity = 86/264 (32.58%), Postives = 145/264 (54.92%), Query Frame = 1 
Query:  106 DTCNKYLDSVKPFLTKDEFMETGFKVELFQNGIGKELHNKLMQLAKHSKNWAQDRWYD-SYFDYRGSNPMMSNISGGYESRFDFDQPCHGLVIERAANWIHSMTTIYQRVVKQEVPVQKLGRQFPMDMSQYANFFCGSRLPGEKRDTLMHNIHLLPQPDGSMHVVAPSKHIVVMKNAHIFHVKVIDDNNVILHPKSIQRQLERIHEICKDLEEGEGVAALTMGTRDKWYKAYKHLCILDRQNKTNINLINQSIFAFAFEDVETH 894
            ++  KYL+SVKPF  ++E+ +T   V+ FQ+GIG++LH KL++ AK  +NW ++ W + +Y D R  + +  N +G       +  P  G  +ER +  +      +Q + K++VPV K+G   P+DM+Q+   F   ++PG  RD++M+  +   + +G     +P+ HIVV+     F   VI +   ++ P  + RQL  IH+ C    +G G+AALT   R +W KA ++L  LD +N   +  I  S+  ++ ED   H
Sbjct:   30 ESLKKYLESVKPFANQEEYKKTEEIVQKFQSGIGEKLHQKLLERAKGKRNWLEEWWLNVAYLDVRIPSQLNVNFAGPAAHFEHYWPPKEGTQLERGSITLWHNLNYWQLLRKEKVPVHKVGNT-PLDMNQFRMLFSTCKVPGITRDSIMN--YFRTESEGR----SPN-HIVVLCRGRAFVFDVIHE-GCLVTPPELLRQLTYIHKKCHSEPDGPGIAALTSEERTRWAKAREYLIGLDPENLALLEKIQSSLLVYSMEDSSPH 284
The following BLAST results are available for this feature:
BLAST of TCONS_00026929 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
OCTC6.773e-3832.58Peroxisomal carnitine O-octanoyltransferase OS=Hom... [more]
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