TCONS_00026972 (transcript) - C. hemisphaerica

Overview
NameTCONS_00026972
Unique NameTCONS_00026972
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1618

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00026972 ID=TCONS_00026972|Name=TCONS_00026972|organism=Clytia hemisphaerica|type=transcript|length=1618bp
ATTTGAATCGAGAGGCCGCCGTGTTTTTCTTGTGTCAAAGACTTTTTTCT
GGAAAGTCGATATCAAGTGTTGAAACAATTTGTATTTATTTGGTCAAATA
TATCTTGTGTGGAAACGCCtggttggttttttttttttttttgttaaacg
TCAAAATATTCTAAAATGGATTGCGCTAAATGTaaccaaccaatcaaatt
gctgAAAGTTGACAACAATGGTAAATCATATCACACGGGTTGTTTCACGT
GCGAAGCTTGCAAAGGATCGCTGAAGAATCGCAAAGTTGAAAGTTTGGCG
GGAAACTTGTATCACGTGGATTGtttcaatcaaatttcagaTGTGATCTG
TGGTAGATGTCAAAAGATAGTGACGGGGGTTGCGATGGATCACGGGGGTA
AATGTTATCATGAAGAATGTTTCACTTGTAAAATGTGTAAAGAATCTATC
GAAGgtaaaaaattctttttcgaagGTGGCGAATTTTACGATGAAAAATG
TTACAAATCACAACACAGCCTCGTTTGCGATATTTGTTTGTTCGAAATTG
ACGGTACCGATGTCAGATACGTGACGTATTTCGAGAAATTTATTCACCAC
GAGTGCTTCACGTGCACCAGTTGTAACAAACCACTTTCAACAGCCGAGAA
ATTTCGTGACGTCAAAACAACTGTTAAAGGGGCGTTGATTTGTATGCCTT
GCTCACAAAAAGCACCTGTCAGACGCACCAAAATGAGATTTAATCAATTT
AATGGACTGTAGAGGTCTTAGATACTTGGCAAGATTATGTGTAGATCCTA
TAATCCGCTAGATTCCGTGCATCCCTAAAAAagtgtttattaatttttcg
tAACAAAACTTATTAGAGGGAGGTTGGCAGCCATCTAGAAGGAAAAAGTT
GGATTTTGAAAAGGCGGAACTGTGTTCAAATTGAGGGATTGTCGTGGGAA
AAAACTTAACTTAGCCAAACCAAGAACCTCTCTATTTTCGCTATTCTCTT
TCTCTTATCGAATGCTTAGCCCACTAGGCAAGGAGGACTCAATTATAATT
GGACAGGGGAAGCATGTGCGCAAGGGCGTTCTTACACGGACGTCACGGAC
TGAAATTTTCCTTGTAAATTCCTTCCCAGTCTCTTAAAAGTTAGCCGCGC
CGGTATGTAGAGAttagattgggcttttccagaaatagtccgtgtccccc
ctgttgaggatatcagatatccagggggttaacgatttttgctcaaaatt
ggatatccaggggattaaatatctacaagagagcggatatccagggggta
aagcgtcttttcaagtaaaaaatacgatatccaggggatattcagggggt
tgagcatattctTCAGCGTGGATAtacagggggtctttactaataaagta
ggatatccagggggttcgatacttcggaaaatcaatatcctcaacagtgg
gggtaaattttttttctggaaaagcccgtTCATAGTCTGTCTACTTCGAG
TGTAGAAATCTCGCGCTTGTAACGTAGCTAATTTATtgtataaaaagttt
tttttttgttagagAATgtatgtaatatttttttcaaaattttaaaaata
aacatgtagagaaatttg
Run BLAST on NCBI

protein sequence of TCONS_00026972-protein

>TCONS_00026972-protein ID=TCONS_00026972-protein|Name=TCONS_00026972-protein|organism=Clytia hemisphaerica|type=polypeptide|length=198bp
MDCAKCNQPIKLLKVDNNGKSYHTGCFTCEACKGSLKNRKVESLAGNLYH
VDCFNQISDVICGRCQKIVTGVAMDHGGKCYHEECFTCKMCKESIEGKKF
FFEGGEFYDEKCYKSQHSLVCDICLFEIDGTDVRYVTYFEKFIHHECFTC
TSCNKPLSTAEKFRDVKTTVKGALICMPCSQKAPVRRTKMRFNQFNGL
Run BLAST on NCBI

transcript from alignment at sc0000597:158913..168951-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00026972 ID=TCONS_00026972|Name=TCONS_00026972|organism=Clytia hemisphaerica|type=transcript|length=10039bp|location=Sequence derived from alignment at sc0000597:158913..168951- (Clytia hemisphaerica)
ATTTGAATCGAGAGGCCGCCGTGTTTTTCTTGTGTCAAAGACTTTTTTCT
GGAAAGTCGATATCAAGTGTTGAAACAATTTGTATTTATTTGGTCAAATA
TATCTTGTGTGGAAACGCCTGGTTGGTTTTTTTTTTTTTTTTGTTAAACG
TCAAAATATTCTAAAATGGTAAGCTTTTGGTAATTCTTGTATAGTTTTGT
GGCATTTTGTGTTTAAACTTTAAGAACGTTCGGGAAGGTTAGGCTACACT
CGATCCCAGGGTCGAAACCGTTTACAGGGTCTGGATACCACCATTCAAAT
ATAAAGTAAAGGAAAAACAACAAAAGTCCTTCGGTAAACCATCATTAGTG
CTACATATTACAAAAACTTCGGGATTTAATATTATCGTATAAAATATGTA
AAGGTTTCATTTTTACCATGAACATGTTTTTACATAAGTGTTTCTGTTTC
ATATCAGATACATGTTTCATATCAGGTCAGTGTCTGCCTATTGTTATATT
ACACCTCTGTCTCATAGCCTTGGAAGAACATTTTTCCTCAGTGGGGATAG
AAATTCCTATTAAAATCCTAATGGGGATAGAAATTCTATTGTTCCAAGGT
TAAAAACAAAAAACCTAGTTTTGGAGTGCAATTTTTAAACATGGAATTTC
GAGCAGGTGTGAAATCAAAGTCGATTTCTCAGTGGGGCTGAAATTTATCA
AATTTTCCAGTGGAGCTGGGGTCCCAGCGGGTCTCTGGCTAGAACTTAAA
ATCTAGGGTCAAAACAATATAAAGGATCCAGAAACTTAAGCTTCATCGTG
CAGAATACGAGAGCAACTTTAACATTAAATGTAAAGTAAAAAAAATCTTT
AGGTAAAACAATATCATCAGTGCATATTATATTGTATGAAACATGTTGGC
CCCTATTTGAGAGGGTTGGCTCTGTGGTCCAAAAAAGATCTTCTTATTAC
TAATTTTCATAACTTGTTAATCCTTTTAAATAAAACATTTTCGTTATTTG
CGTTCCGCACGACTCCTCCCCGATTAACCAAATATTTTATGTAATTTCGG
CGCCGGTTAAACAAAAACAGTGTAGAAAATTCTGTGCTGATTGCTTGATG
GCTAATAGTTCTGCCTAAAAGCATCAAAGACTTAGAGAAAGTCTTCTCTA
AGTCTTTGAAATCATCAAGCTTCCTAGTGGATCTAGTTTTACAATCCTTT
TGTCTCCTAAAAGTTCTGATTTTTAATTTTAGAACCCTTCTTATCTTTTT
AATAAACAAAGTGTTTTACAGAAACGGTTACAAAAATCTTATCAGAAAGG
GCACTCTATTTGTCTTCAATCACGATCACGCAAATCAGCAAAAACAATGG
ACAATCACACATCCCTTTGAAAAAGTCCAAATCACGTATCACGTCTCAAA
ATCCTTTCAAATCACAATCACATTTTGACCTCTCATCACCCAATCACGAA
GAAAAAATTTCCAAATCACGTAATCACGCTGCCAAAAAGTCCCTATCACG
TCATCACGAAAACCGCTTGGGGAAAACCTTGGAAAGTGTCCTATGAGAGC
ATGGAGCACCCTATGAAAACTGAGTATAGAGAGATGTGCCGCTGGGTAGG
ATGTGATAAGTTTATGTCGTTATTAGATCTTCAAAACTTAACAAAATCCA
GCAAATAATTGGACAAAAAGAAATTCCACAAAAGTCAGTATTAAACAGCT
CAGTTCCGATTTTCATCAGTAAAACTATCCATCATCCATTAAGATGCCTA
CCCATCTGACACGTAACGTTGTATTAACGTCCATCATACATTCATAGCGT
CCATATTACGTTAAGTAGACGTTCAAACAACACTTCACTACTTGGGTATT
TAGTCCCCACACCCTTGGATGTCTAAGATTGCATATAGTTTCGAAAGAAT
CTAAAGTTAGTTTTATCTGCTGTTTGGAAAAATGTACACGTTTTTTTTAG
AACAAACTATATAAGAACATAAAGCTTCGATGGCCAAAATGCTAAGAACA
AGTTAAGAACATTTTAAGGCTTTGCGGACTCTAAAAGACCCGATTTCATA
GGAAAATAGACAAAAATACTAAACAACGGCGAAAATAAGAACATGCTAGG
AACATTTTTAGGTTTAAAAAACAAACAATTAAGAACATCCTAAGGCTTCA
GAAATTTTGGCTTATAAAAAAATGCATAGGTCAAATAAATTCCAGCTCAA
CTTTCAATCATTTACAAACTTACCGAGATACAAATAAGGCAGCGCGAAAA
CCCACAACAGCTCCCTGGCTGTGATGAAATTTCATTAACATTACCTCGTA
AAGCTCCTATCTTGATTTCTTGATTGCGGTTGTTTATTTTTGTCCACTGT
TCATAATTTTCGTTCTTATTTAGAGCGATATTTTGTAGCGTTGTCGGTTT
TTTCGCTTTGTTTTTGATAAGAAAAATTATTCATCCGTGATTTGATTCAA
GACTAATAAAGATTCTTCAAGAAACTTCACTCTTTAAACGGTCGACTTTT
TGACGAGCGTCGTCTCTCCACATTTAAAATAAATGAAATGATGTTTCTCG
ACTTTCCGTCGTTCTTCTGTTGGCTTTTGACTTCAAGTAAAAGGTCGCCG
TCCAAGTTAAAAAATTATCCAAATGTTTACGATCTATATATACCCCCCCC
CCCCACATTTGAGCAAAATAGACTCTTTTCTCCAATTCATGGCGAATTCT
ATCTCATTTAGTTCCTTTAGCCCCTCCACTTTTATGGTTGTTATGCCGGG
CTAGTAACTGAATAGATAAAATTACACATAGTACCCTATATCGATACTTG
GGAGGAGGCCAGAAAATCTTTTAAAGTAAAATAAATACTCTACAACAAAT
TTTTTCCATAAAGTTGATGAATCCCTTATTTGCCATCATGGGAGCCATTA
TAAACAAACCTTGTTGTGCGCAGAAATGTAATACCTGCGCAGAAATGTAA
TACTTCCTGCGCAGAAATGTAATACCTGCGCAAAAATGTAATACTTCCTG
CGCAAATTTGTAATACTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAATTCGAGAAGTGTTTAAA
AACGACTCAATTACACGTTCTTAGTAAGAATACAAACCTTTTTGGAAGTT
TTTTGGTATTCTTATTAAGTTATTGGAAATAAGCGCTTTAAATTCAAATT
TAGACCAAAAAAGGCTAAAAATAGGTCCAATTTCGCTGGTTATTGTAATT
TCTAAGAGCATTTGCGTTTTAAATCTCTAATAGTTCCTGGTTTTCTACAC
CCGAAGCCTTGCATACTCTTATACTTTTTATTTGATTAAAAATACTGGCC
CTATCATATTTAAAGCAGGCAGAAACTTCGCAGTAATTTTTCCAGTTGGA
AGGCAGGGTTCTCACCGGGTCTGCGAGAAGGAGCGTGCTATGCCAAAATA
ATAATCAAAGGATTTTAGCAACCTTTCAAAAGATTTGTAAAGGATGTGTA
CATAAGTATTTTTTAGCATAATTGCGCTTATTTTTAACAATAAGCGTTTC
AGAAGCCCCTCAGAAGCCTATGATTTCTTATCTGCAACTTCATTTTAGGG
AAGGAATTTATATTTTTTGGTGGCCACGAGATTTAACCCTAATATCAGGA
GGGGGTGTTTTGCACCACATTCAAAATTTTTCAGCAAGTTCGTATCATGT
TAGGAAATATTTCTGCTAAATTTCATAAGCATTACTACAGGGTGTCCCTA
ATAAAAGTATCGAGTTTGAACATGCGATTGAGTAGAAAAGTTTGTTTGTG
TTATCGCTAAAATATAAGNCACATAGGCTCATTACAAAAGGTAGTTACAA
CGTATAACTGACAAAGAAAAAAGAGGGAGAGCTTAAAATACAATTTTGTG
AATACACACTTAAAACTTATTCTACTCAATCGCATGTTCAAACTCGTTAC
TTTTATTAGGGACACCCTGTNATAATTGCGCTTATTTTTAACAATAAGCG
TTTCAGAATATCAGGAGGGGGTGTTTTGCACCACATTGAAAATTTTTCAG
CAAGTTCGAATCATGTTAGGAAATATTTCTGCTAAATTTCATAAGCATTA
CTAGATCAAAAATAATCAAGAATGGTAGAATTCCCTCTCCTGAGAATAAG
AAGCATAAAAAATCCTGATAATAATAGGATTAAAATTAGAAAAAGACCAA
TTATTTGTGTCCACAAAGACAGATGACTGTAGACAACACGATGTTTAACA
AAGTTAATTATTGTAAGTAATTACATATTGTGCTAAATTTCAATAACAAC
ATTGTTTTTCACACATATATGTAATCTCATAATATCTGTAAACTTTTACC
TGTCAGCGGTTGGTTAATGATAAGAAAACAATAATAATTATTTTCAAAAT
TATTAAAGTCACCGAGTTAAATCTATANACCTGTCAGCGGTTGGTTAATG
ATAAGAAAACAATAATAATTATTTTTAAAATTATTAAAGTCACCGAGTTA
AATCTATTTTGTTTGGGTATTGCGATTTTCTATATTTATGATTTGATAGC
GAGTTCGATTTCGCAAAGAGTGTTGAAAAAAAGTGGAAAATGAGAGTGTG
GATCGAATCGTTTGACCGCTGACCAATATTTTCAATAATTTCAATGATAC
ATATACACCTGCAAATCGATTGGGAATGATACAGCTGCATTTTTCTGTTT
CGACTTTGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTTTCTTATAAA
GAAAATTCTTATAAGAAAAATAAATTTGCCCATCTTTTGCATCGTTACTT
GTTTACTTTGTAAGAACCATAAACCGACAGCCAATTCGCCCTAAAACGAG
AGTTACAGATTTGTTTCTTATAAAGAAAATTCTTATAAGAAAAATTTGCC
CATCTTTTGCATCGTCACTTTTTTTTACTTTATACCGACATTCAATTAAT
TTTGAAACTTAAGTTATTGAATTTTATTCTTATAAGAAAAATTCAAATTT
TTATGTGAAAATTTTCCAAGTCTTTTTCTGGAACTTTTCTTTGTAGAATA
GAATATGACATTTGAAAACATAATGAATTCCAAATTACATTTCTGCGCAG
ACAAGTATTACATTTCTGCGCAGCTCGAGTATTACAAATTTGCGCAGGAA
GTATTACATTTTTGCGCAGGTATTGCATTTCTGCGCAGGAAGTATTACAT
TTCTGCGCAAGTATTACATTTCTGTGCACAACAAACCTCTATAATTGGAG
CAAATTTGTATCATCTTTGATAGTATACATTGTTTTATATCGCACCTAAT
AAAATTTCAGCAACAGGTCTCAGACAAAGTTTTCAACTGTTCAAACGGGT
CTTCTTCAAATATTTTCCCCTTTTCCACCAACAGGATTGCGCTAAATGTA
ACCAACCAATCAAATTGCTGAAAGTTGACAACAATGGCAAATCATATCNA
CAGGATTGCGCTAAATGTAACCAACCAATCAAATTGCTGAAAGTTGACAA
CAATGGTAAATCATATCACACGGGTTGTTTCACGTGCGAAGCTTGCAAAG
GATCGCTGAAGAATCGCAAAGTTGAAAGTTTGGCGGGAAACTTGTATCAC
GTGGATTGTTTCAATCAAATTTCAGATGTGGTACGATTTTTTTCGTTCTT
TGTACAATACTTTCTACTTGAATCGAACTTCTATAATTTGTATGTCTCAT
TAGTTTTCTAGTCTCTTCACTTAACAATGTTTTATAAATCTTACTCCATA
ACTCGAAACTCCCTTAACTCGAACAAATTTGTTTTCCCCGTCCGTATTCG
ACTTCACTGTAATAGTAAACTTATGCAAAACTTCAAAACAACATCTATCT
AGTGTACACGTTTTTTTTTTATAAGAACGTCAAAAATTTTCGAAGCCTTC
GGATGTTCTTAGTTTTTTGGACTTGATGCCTAAAAATTTTCTTACAATGT
TCTTATTTTCAGCTTTTTTTGAGCATTTTGATGTAATTTCTTAAGAAATT
GCATGTTGTTAATTCTCCAAAGCCTTAGTATGTTCTTAGAATGTTCTTAG
ATTTTTGGGCCTCGAAGCCTTATGTTCTTATATAGTTTGTTCTTATAAAA
AAAAAACGTGTACGTATATAACGTTAGGCGAACGTTGAAACAACGCTTTG
TTCCAGCTAGGCTAGCTGTTAAAGAGAAGTTTAAATCTAAAAGAACGGGA
GGCCGAATTTCGTGATTATAGTTTTCTAAGATTCACCGGAAGTGTGACAT
CGTCCTCAAGGTATAGATTATGTGGTGAGGTGCGTTGTGTTTAAATTGAA
TATTCTCTCTCAAAAAAAATGATTTGTTGCTCTACAGTTTGATTTGAGCT
TAAAGAAAACTGTAAAGGTTTGTCTGCAACAAGGTTATTTAAATAAACCA
AATAAACTTCTTGTTTTTTTCTCTAGATCTGTGGTAGATGTCAAAAGATA
GTGACGGGGGTTGCGATGGATCACGGGGGTAAATGTTATCATGAAGAATG
TTTCACTTGTAAAATGTGTAAAGAATCTATCGAAGGTAAGATTTTACATT
ATGTTGTGTCTCTCATCAGTTCAGTGAGAAAATCCTTCAATTTTGTTTTT
GATCGGGAGTCCAATGGTTGTTGTAGTTATGGCTCATCAGAGCCTTCCTA
TTCAGAACATAGAATGTTTTGAAATTTTATTAATTTGTGTATTTGTGCCC
TCTATTTTTTTATAAGAATGGTGTTTTTTATATCATGGATATTCTTACAC
CATGCTTAGGTTAAGATCCAAATACAAAGTAGATTTAATACGCAATACAT
ACGTCTAAAGTAAAAAATGGCATGTGTTGTCATTGTCTTTAGAGGATAAT
TGTTAACTTACAGTTACAAATGCTCTGAAATGGCATTTTTAGGTTTATTA
GCTAAATTTCATGAAGATGATATTCTTAGCATATTCTTGATAGTTTGGCC
AATTTTATCATAAATATCCTTATAAAATATATTCTTATAAAAAAGACTTG
AATTTAATTTCTCTTGTCTCACGGCCCTTGATAAACTAATTTTTCATCAT
TCNATCATGTATATAATTGAACTTCTCTTGTCTAACGACTCTTGATTTTA
ACCATTTATAATTTATCTTTTTCAGGTAAAAAATTCTTTTTCGAAGGTGG
CGAATTTTACGATGAAAAATGTTACAAATCACAACACAGCCTCGTTTGCG
ATATTTGTTTGTTCGAAATTGACGGTACCGATGTCAGATACGTGACGTAT
TTCGAGAAATTTATTCACCACGAGTGCTTCACGTGCACCAGTTGTAACAA
ACCACTTTCAACAGCCGAGAAATTTCGTGACGTCAAAACAACTGTTAAAG
GGGCGTTGATTTGTATGCCTTGCTCACAAAAAGCACCTGTCAGACGCACC
AAAATGAGATTTAATCAATTTAATGGACTGTAGAGGTCTTAGATACTTGG
CAAGATTATGTGTAGATCCTATAATCCGCTAGATTCCGTGCATCCCTAAA
AAAGTGTTTATTAATTTTTCGTAACAAAACTTATTAGAGGGAGGTTGGCA
GCCATCTAGAAGGAAAAAGTTGGATTTTGAAAAGGCGGAACTGTGTTCAA
ATTGAGGGATTGTCGTGGGAAAAAACTTAACTTAGCCAAACCAAGAACCT
CTCTATTTTCGCTATTCTCTTTCTCTTATCGAATGCTTAGCCCACTAGGC
AAGGAGGACTCAATTATAATTGGACAGGGGAAGCATGTGCGCAAGGGCGT
TCTTACACGGACGTCACGGACTGAAATTTTCCTTGTAAATTCCTTCCCAG
TCTCTTAAAAGTTAGCCGCGCCGGTATGTAGAGATTAGATTGGGCTTTTC
CAGAAATAGTCCGTGTCCCCCCTGTTGAGGATATCAGATATCCAGGGGGT
TAACGATTTTTGCTCAAAATTGGATATCCAGGGGATTAAATATCTACAAG
AGAGCGGATATCCAGGGGGTAAAGCGTCTTTTCAAGTAAAAAATACGATA
TCCAGGGGATATTCAGGGGGTTGAGCATATTCTTCAGCGTGGATATACAG
GGGGTCTTTACTAATAAAGTAGGATATCCAGGGGGTTCGATACTTCGGAA
AATCAATATCCTCAACAGTGGGGGTAAATTTTTTTTCTGGAAAAGCCCGT
TCATAGTCTGTCTACTTCGAGTGTAGAAATCTCGCGCTTGTAACGTAGCT
AATTTATTGTATAAAAAGTTTTTTTTTTGTTAGAGAATGTATGTAATATT
TTTTTCAAAATTTTAAAAATAAACATGTAGAGAAATTTG

Coding sequence (CDS) from alignment at sc0000597:158913..168951-

>TCONS_00026972 ID=TCONS_00026972|Name=TCONS_00026972|organism=Clytia hemisphaerica|type=CDS|length=2388bp|location=Sequence derived from alignment at sc0000597:158913..168951- (Clytia hemisphaerica)
GTAAAAAATTCTTTTTCGAAGGTGGCGAATTTTACGATGAAAAATGTTAC
AAATCACAACACAGCCTCGTTTGCGATATTTGTTTGTTCGAAATTGACGG
TACCGATGTCAGATACGTGACGTATTTCGAGAAATTTATTCACCACGAGT
GCTTCACGTGCACCAGTTGTAACAAACCACTTTCAACAGCCGAGAAATTT
CGTGACGTCAAAACAACTGTTAAAGGGGCGTTGATTTGTATGCCTTGCTC
ACAAAAAGCACCTGTCAGACGCACCAAAATGAGATTTAATCAATTTAATG
GACTGTAGATCTGTGGTAGATGTCAAAAGATAGTGACGGGGGTTGCGATG
GATCACGGGGGTAAATGTTATCATGAAGAATGTTTCACTTGTAAAATGTG
TAAAGAATCTATCGAAGGATTGCGCTAAATGTAACCAACCAATCAAATTG
CTGAAAGTTGACAACAATGGTAAATCATATCACACGGGTTGTTTCACGTG
CGAAGCTTGCAAAGGATCGCTGAAGAATCGCAAAGTTGAAAGTTTGGCGG
GAAACTTGTATCACGTGGATTGTTTCAATCAAATTTCAGATGTGATGGTA
AAAAATTCTTTTTCGAAGGTGGCGAATTTTACGATGAAAAATGTTACAAA
TCACAACACAGCCTCGTTTGCGATATTTGTTTGTTCGAAATTGACGGTAC
CGATGTCAGATACGTGACGTATTTCGAGAAATTTATTCACCACGAGTGCT
TCACGTGCACCAGTTGTAACAAACCACTTTCAACAGCCGAGAAATTTCGT
GACGTCAAAACAACTGTTAAAGGGGCGTTGATTTGTATGCCTTGCTCACA
AAAAGCACCTGTCAGACGCACCAAAATGAGATTTAATCAATTTAATGGAC
TGTAGATCTGTGGTAGATGTCAAAAGATAGTGACGGGGGTTGCGATGGAT
CACGGGGGTAAATGTTATCATGAAGAATGTTTCACTTGTAAAATGTGTAA
AGAATCTATCGAAGGATTGCGCTAAATGTAACCAACCAATCAAATTGCTG
AAAGTTGACAACAATGGTAAATCATATCACACGGGTTGTTTCACGTGCGA
AGCTTGCAAAGGATCGCTGAAGAATCGCAAAGTTGAAAGTTTGGCGGGAA
ACTTGTATCACGTGGATTGTTTCAATCAAATTTCAGATGTGATGGTAAAA
AATTCTTTTTCGAAGGTGGCGAATTTTACGATGAAAAATGTTACAAATCA
CAACACAGCCTCGTTTGCGATATTTGTTTGTTCGAAATTGACGGTACCGA
TGTCAGATACGTGACGTATTTCGAGAAATTTATTCACCACGAGTGCTTCA
CGTGCACCAGTTGTAACAAACCACTTTCAACAGCCGAGAAATTTCGTGAC
GTCAAAACAACTGTTAAAGGGGCGTTGATTTGTATGCCTTGCTCACAAAA
AGCACCTGTCAGACGCACCAAAATGAGATTTAATCAATTTAATGGACTGT
AGATCTGTGGTAGATGTCAAAAGATAGTGACGGGGGTTGCGATGGATCAC
GGGGGTAAATGTTATCATGAAGAATGTTTCACTTGTAAAATGTGTAAAGA
ATCTATCGAAGGATTGCGCTAAATGTAACCAACCAATCAAATTGCTGAAA
GTTGACAACAATGGTAAATCATATCACACGGGTTGTTTCACGTGCGAAGC
TTGCAAAGGATCGCTGAAGAATCGCAAAGTTGAAAGTTTGGCGGGAAACT
TGTATCACGTGGATTGTTTCAATCAAATTTCAGATGTGATGGTAAAAAAT
TCTTTTTCGAAGGTGGCGAATTTTACGATGAAAAATGTTACAAATCACAA
CACAGCCTCGTTTGCGATATTTGTTTGTTCGAAATTGACGGTACCGATGT
CAGATACGTGACGTATTTCGAGAAATTTATTCACCACGAGTGCTTCACGT
GCACCAGTTGTAACAAACCACTTTCAACAGCCGAGAAATTTCGTGACGTC
AAAACAACTGTTAAAGGGGCGTTGATTTGTATGCCTTGCTCACAAAAAGC
ACCTGTCAGACGCACCAAAATGAGATTTAATCAATTTAATGGACTGTAGA
TCTGTGGTAGATGTCAAAAGATAGTGACGGGGGTTGCGATGGATCACGGG
GGTAAATGTTATCATGAAGAATGTTTCACTTGTAAAATGTGTAAAGAATC
TATCGAAGGATTGCGCTAAATGTAACCAACCAATCAAATTGCTGAAAGTT
GACAACAATGGTAAATCATATCACACGGGTTGTTTCACGTGCGAAGCTTG
CAAAGGATCGCTGAAGAATCGCAAAGTTGAAAGTTTGGCGGGAAACTTGT
ATCACGTGGATTGTTTCAATCAAATTTCAGATGTGATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015141XLOC_015141Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026972-exon-sc0000597-1575043694:168784..168951TCONS_00026972-exon-sc0000597-1575043694:168784..168951Clytia hemisphaericaexon
TCONS_00026972-exon-sc0000597-1575043694:161572..161748TCONS_00026972-exon-sc0000597-1575043694:161572..161748Clytia hemisphaericaexon
TCONS_00026972-exon-sc0000597-1575043694:160667..160775TCONS_00026972-exon-sc0000597-1575043694:160667..160775Clytia hemisphaericaexon
TCONS_00026972-exon-sc0000597-1575043694:158913..160076TCONS_00026972-exon-sc0000597-1575043694:158913..160076Clytia hemisphaericaexon
TCONS_00026972-exon-sc0000597-1510915933:168784..168951TCONS_00026972-exon-sc0000597-1510915933:168784..168951Clytia hemisphaericaexon
TCONS_00026972-exon-sc0000597-1510915933:161572..161748TCONS_00026972-exon-sc0000597-1510915933:161572..161748Clytia hemisphaericaexon
TCONS_00026972-exon-sc0000597-1510915933:160667..160775TCONS_00026972-exon-sc0000597-1510915933:160667..160775Clytia hemisphaericaexon
TCONS_00026972-exon-sc0000597-1510915933:158913..160076TCONS_00026972-exon-sc0000597-1510915933:158913..160076Clytia hemisphaericaexon
TCONS_00026972-exon-sc0000597-1491911889:168784..168951TCONS_00026972-exon-sc0000597-1491911889:168784..168951Clytia hemisphaericaexon
TCONS_00026972-exon-sc0000597-1491911889:161572..161748TCONS_00026972-exon-sc0000597-1491911889:161572..161748Clytia hemisphaericaexon
TCONS_00026972-exon-sc0000597-1491911889:160667..160775TCONS_00026972-exon-sc0000597-1491911889:160667..160775Clytia hemisphaericaexon
TCONS_00026972-exon-sc0000597-1491911889:158913..160076TCONS_00026972-exon-sc0000597-1491911889:158913..160076Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00026972-proteinTCONS_00026972-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000597supercontigsc0000597:158913..168951 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.454843	0.274512	0	0	0.682699	0	0.292386	0.758787	0.446463	0.425499	0	0.359315	7.52544	5.34057	0	0	0.92575	2.79979	16.8301	28.5479	1.20564	0.64351	11.2854	5.70658	10.9878	17.518	40.0291	60.9248	142.395	211.284
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001781Znf_LIM
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00026972 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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