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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00026985 ID=TCONS_00026985|Name=TCONS_00026985|organism=Clytia hemisphaerica|type=transcript|length=1059bp
GCTGAGTATCTGTGAGAGAGCCATTGGCTTCCATGTGATTGATGACATGA
CTGTGTATAACATGTTCTAACACTTTACATGTGACTGATGTTAGGCTGAT
AGGGCGGTAATTTTCTGCTTTCGAGCGGTTCTTGCTCCCACCTTTGTAAA
GGTGATAATAGGAATAAGGCTAATACCATGATAGTTGTTAGGGTCACTTA
ACGACTTCTTGTAGGATTTAACCAGCGGAATCAGGATTGAAGTACCTAGT
TGGCTCGGTAAATGTGGCAATGAAAACAGTTTGTTAATTAGGTCTGTCAG
GTATGATTTGATGGTCGGGCTTTTCGCACAGAGAAAATGTTCGGCTTTGA
GCTGAAAAGGATCCCTAGACTTTCCGAATTTCAATCGACTGAGAGCGTTT
GCTACATTAGATTCAGTTACGTAAAAATCATCTGAAGGATCATGGTTAAT
CTGTTGTAGAATTTCGTTGAGTTTTAGATTGGTTTCTGCATTGTCAGTAT
TTGGAACGCGTGGGGTGTTTAACAAGTTATTAAAATGAGAGAGGAATTCA
GCTGTAATATCTGATTTGTTGGATTTACCGTTTATTGTATAAAGTTTTTG
GTCAGTATTTCTCAGGGATCTTTTCCAGTAGGTTTCCGGTTTAACGTCCT
TCAATTTATCAATGTTGATGTAGTGTCTGGCGGTATCATTGCTTTTGGCA
CGTTTTACGTGATAACGAAAGGATTTGCGTGCAAATCTATATCGACAATA
TGAGGTGTTAGTAGGGGATTTTGGGAAACCATTATGTTTCCAGATATTGA
ACATTGAGCGTAGGATTTTGTGAACTTTCCGGATATCGTCGTTCCACCAA
GGTTTGGATTGAAAAATATATGCGGTTTCTTGGAAAGACTTGCAGGCTTC
ACTTGCACACGAACGGAGGGTGAAGTGGAATTGGTCTAACGAATCATCAG
AACTAAAGTCAAGTTTGCCGAAGGCTGTGGTGACGCAAGAGCGGTAGAGA
TCaacaaatttgtcatttttccaaAGGTGGTTAGGAACAAAGTCAGAATT
AAGGGTAGT Run BLAST on NCBI protein sequence of TCONS_00026985-protein >TCONS_00026985-protein ID=TCONS_00026985-protein|Name=TCONS_00026985-protein|organism=Clytia hemisphaerica|type=polypeptide|length=322bp
TTLNSDFVPNHLWKNDKFVDLYRSCVTTAFGKLDFSSDDSLDQFHFTLRS
CASEACKSFQETAYIFQSKPWWNDDIRKVHKILRSMFNIWKHNGFPKSPT
NTSYCRYRFARKSFRYHVKRAKSNDTARHYINIDKLKDVKPETYWKRSLR
NTDQKLYTINGKSNKSDITAEFLSHFNNLLNTPRVPNTDNAETNLKLNEI
LQQINHDPSDDFYVTESNVANALSRLKFGKSRDPFQLKAEHFLCAKSPTI
KSYLTDLINKLFSLPHLPSQLGTSILIPLVKSYKKSLSDPNNYHGISLIP
IITFTKVGARTARKQKITALSA Run BLAST on NCBI transcript from alignment at sc0000597:117151..118209 Legend: exonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00026985 ID=TCONS_00026985|Name=TCONS_00026985|organism=Clytia hemisphaerica|type=transcript|length=1059bp|location=Sequence derived from alignment at sc0000597:117151..118209 (Clytia hemisphaerica)
ACTACCCTTAATTCTGACTTTGTTCCTAACCACCTttggaaaaatgacaa
atttgttGATCTCTACCGCTCTTGCGTCACCACAGCCTTCGGCAAACTTG
ACTTTAGTTCTGATGATTCGTTAGACCAATTCCACTTCACCCTCCGTTCG
TGTGCAAGTGAAGCCTGCAAGTCTTTCCAAGAAACCGCATATATTTTTCA
ATCCAAACCTTGGTGGAACGACGATATCCGGAAAGTTCACAAAATCCTAC
GCTCAATGTTCAATATCTGGAAACATAATGGTTTCCCAAAATCCCCTACT
AACACCTCATATTGTCGATATAGATTTGCACGCAAATCCTTTCGTTATCA
CGTAAAACGTGCCAAAAGCAATGATACCGCCAGACACTACATCAACATTG
ATAAATTGAAGGACGTTAAACCGGAAACCTACTGGAAAAGATCCCTGAGA
AATACTGACCAAAAACTTTATACAATAAACGGTAAATCCAACAAATCAGA
TATTACAGCTGAATTCCTCTCTCATTTTAATAACTTGTTAAACACCCCAC
GCGTTCCAAATACTGACAATGCAGAAACCAATCTAAAACTCAACGAAATT
CTACAACAGATTAACCATGATCCTTCAGATGATTTTTACGTAACTGAATC
TAATGTAGCAAACGCTCTCAGTCGATTGAAATTCGGAAAGTCTAGGGATC
CTTTTCAGCTCAAAGCCGAACATTTTCTCTGTGCGAAAAGCCCGACCATC
AAATCATACCTGACAGACCTAATTAACAAACTGTTTTCATTGCCACATTT
ACCGAGCCAACTAGGTACTTCAATCCTGATTCCGCTGGTTAAATCCTACA
AGAAGTCGTTAAGTGACCCTAACAACTATCATGGTATTAGCCTTATTCCT
ATTATCACCTTTACAAAGGTGGGAGCAAGAACCGCTCGAAAGCAGAAAAT
TACCGCCCTATCAGCCTAACATCAGTCACATGTAAAGTGTTAGAACATGT
TATACACAGTCATGTCATCAATCACATGGAAGCCAATGGCTCTCTCACAG
ATACTCAGC Coding sequence (CDS) from alignment at sc0000597:117151..118209 >TCONS_00026985 ID=TCONS_00026985|Name=TCONS_00026985|organism=Clytia hemisphaerica|type=CDS|length=969bp|location=Sequence derived from alignment at sc0000597:117151..118209 (Clytia hemisphaerica)
ACTACCCTTAATTCTGACTTTGTTCCTAACCACCTttggaaaaatgacaa
atttgttGATCTCTACCGCTCTTGCGTCACCACAGCCTTCGGCAAACTTG
ACTTTAGTTCTGATGATTCGTTAGACCAATTCCACTTCACCCTCCGTTCG
TGTGCAAGTGAAGCCTGCAAGTCTTTCCAAGAAACCGCATATATTTTTCA
ATCCAAACCTTGGTGGAACGACGATATCCGGAAAGTTCACAAAATCCTAC
GCTCAATGTTCAATATCTGGAAACATAATGGTTTCCCAAAATCCCCTACT
AACACCTCATATTGTCGATATAGATTTGCACGCAAATCCTTTCGTTATCA
CGTAAAACGTGCCAAAAGCAATGATACCGCCAGACACTACATCAACATTG
ATAAATTGAAGGACGTTAAACCGGAAACCTACTGGAAAAGATCCCTGAGA
AATACTGACCAAAAACTTTATACAATAAACGGTAAATCCAACAAATCAGA
TATTACAGCTGAATTCCTCTCTCATTTTAATAACTTGTTAAACACCCCAC
GCGTTCCAAATACTGACAATGCAGAAACCAATCTAAAACTCAACGAAATT
CTACAACAGATTAACCATGATCCTTCAGATGATTTTTACGTAACTGAATC
TAATGTAGCAAACGCTCTCAGTCGATTGAAATTCGGAAAGTCTAGGGATC
CTTTTCAGCTCAAAGCCGAACATTTTCTCTGTGCGAAAAGCCCGACCATC
AAATCATACCTGACAGACCTAATTAACAAACTGTTTTCATTGCCACATTT
ACCGAGCCAACTAGGTACTTCAATCCTGATTCCGCTGGTTAAATCCTACA
AGAAGTCGTTAAGTGACCCTAACAACTATCATGGTATTAGCCTTATTCCT
ATTATCACCTTTACAAAGGTGGGAGCAAGAACCGCTCGAAAGCAGAAAAT
TACCGCCCTATCAGCCTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00026985-exon-sc0000597-1491911889:117151..118209 | TCONS_00026985-exon-sc0000597-1491911889:117151..118209 | Clytia hemisphaerica | exon |
| TCONS_00026985-exon-sc0000597-1510915933:117151..118209 | TCONS_00026985-exon-sc0000597-1510915933:117151..118209 | Clytia hemisphaerica | exon |
| TCONS_00026985-exon-sc0000597-1575043694:117151..118209 | TCONS_00026985-exon-sc0000597-1575043694:117151..118209 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000597 | supercontig | sc0000597:117151..118209 . |
Blast
The following BLAST results are available for this feature:
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