TCONS_00027057 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027057
Unique NameTCONS_00027057
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027057 ID=TCONS_00027057|Name=TCONS_00027057|organism=Clytia hemisphaerica|type=transcript|length=142bp
GatccaaaaatctcaaattcgTCCATGGATGTATTGTTGGTCTGTCGAAC
TTGAGATTTTTGCGGCATTTTAATCACGGAGAAAAGATGAAACACCAGCC
TTTTGGTTCAAATTATGCAGactcaattttattgaaaatcac
Run BLAST on NCBI

transcript from alignment at sc0000605:2758..2899

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027057 ID=TCONS_00027057|Name=TCONS_00027057|organism=Clytia hemisphaerica|type=transcript|length=142bp|location=Sequence derived from alignment at sc0000605:2758..2899 (Clytia hemisphaerica)
gtgattttcaataaaattgagtCTGCATAATTTGAACCAAAAGGCTGGTG
TTTCATCTTTTCTCCGTGATTAAAATGCCGCAAAAATCTCAAGTTCGACA
GACCAACAATACATCCATGGAcgaatttgagatttttggatC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015204XLOC_015204Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027057-exon-sc0000605-1491911889:2758..2899TCONS_00027057-exon-sc0000605-1491911889:2758..2899Clytia hemisphaericaexon
TCONS_00027057-exon-sc0000605-1510915933:2758..2899TCONS_00027057-exon-sc0000605-1510915933:2758..2899Clytia hemisphaericaexon
TCONS_00027057-exon-sc0000605-1575043694:2758..2899TCONS_00027057-exon-sc0000605-1575043694:2758..2899Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000605supercontigsc0000605:2758..2899 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027057 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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