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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027070 ID=TCONS_00027070|Name=TCONS_00027070|organism=Clytia hemisphaerica|type=transcript|length=344bp
tacccgagaggGCCCAAGAGCataacaaaattcttttgaaagtaCTTACA
ccatagagGTCCCGCTCGTAAAAATGAATACGGAGACGAAATTCAATAAA
CCAACAATTGATGGATCGATTATGGTTGTAGTGAAGATTACAGAATGTAA
ATGTGTTTTATAAAgataaattgaattttttttggaagatATTTTGTGAG
ATAGAAATAGAATATTTTATTTGAGTAGAACCAAGATAAACGTTATTACT
TTTCATCACCACTTTCACTAAtccgaaaaatttaatttcaaacgCCAAGT
TAATTTTTGAAAGAAGAACTCAAGATGTTCCTCTCAAAAAAAAC Run BLAST on NCBI transcript from alignment at sc0000606:789..2319+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027070 ID=TCONS_00027070|Name=TCONS_00027070|organism=Clytia hemisphaerica|type=transcript|length=1531bp|location=Sequence derived from alignment at sc0000606:789..2319+ (Clytia hemisphaerica)
tacccgagaggGCCCAAGAGCataacaaaattcttttgaaagtaCTTACA
ccatagaggtaataaaagttagatggagtaacaacttttccgtaatagcc
agagaagtcataaaactctttagaaNTggctttttcccaaagcaacaaag
caacagtttgctatcaacgatacaatacaatagaatagtaggagtggtat
ctccatctatatttttattacctccatgcttACACGTTTTAAAGAAAACG
GACTCGCTACACgttatttttaagaaacacacttttaagaaacatgaggc
tcagaatgcctaaaaactaagaacattttgctgaggctgagaatgagaaa
acaGCATTATTTAATTCCGTTTTTTAAGAgccttcgaaaaaaaacaaatg
ttttttttctttgcatgaaaaataggctgattatgtcaaaaagtttagaa
acatttaaggctcaaaaggccgatttcttaagaaacattagcgaggttaa
gcaagtgtttatttagaccgttcaatgggccattccattttatgtcAATA
CATAGGggtggacgaacttttccagggggtattttgattaaaatttccag
ggtgTATTTGAAAAACTTCCAGGGGTTCCTGTAAAATTGAGACTATTTTC
CGGGGGGTTAGACAAGTAAGCATCGTCCtccagatatttgattttccagG
GGTCAAGTCGAAGTTACAAAATTTTCgagggtttaaaaaaaatttatgac
cAATTTCCAGAGGGCTAAATGATAATAtgaatttttccagggggttaatA
CCAAATTTTACTTCCTCCACCCTACCACCAGAACCATgggaaaaatttcc
aggggatggTGGAAGAATTTTTTCCAGGgcctttttcagattttaccatt
tttccagggggtatagacacattttcagagaaaaaaatttaccctAAAAA
GGTTCATCCACACCCCTGTATGGTTTGTTtttggaatggcccaatgtttg
aaacataatatttgaaaataatattgcaAATATTGCAAATGCCGTCCGAA
TGCATCTAAAAATCATTAATAAAAACCtcatatattatatatttgaGAAA
TATTTCCAACTCATGAAACTTtaaatttggaaagaaatattgcaaatata
ctGTGCTTTAAAAATTATCTGACAATCTTTAAGacattatattttgaaaa
attctaatATAATTATTTTACATTGTTTATATATTTGCTCTTCAGGTCCC
GCTCGTAAAAATGAATACGGAGACGAAATTCAATAAACCAACAATTGATG
GATCGATTATGGTTGTAGTGAAGATTACAGAATGTAAATGTGTTTTATAA
AgataaattgaattttttttggaagatATTTTGTGAGATAGAAATAGAAT
ATTTTATTTGAGTAGAACCAAGATAAACGTTATTACTTTTCATCACCACT
TTCACTAAtccgaaaaatttaatttcaaacgCCAAGTTAATTTTTGAAAG
AAGAACTCAAGATGTTCCTCTCAAAAAAAAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027070-exon-sc0000606-1491911889:789..846 | TCONS_00027070-exon-sc0000606-1491911889:789..846 | Clytia hemisphaerica | exon |
| TCONS_00027070-exon-sc0000606-1510915933:789..846 | TCONS_00027070-exon-sc0000606-1510915933:789..846 | Clytia hemisphaerica | exon |
| TCONS_00027070-exon-sc0000606-1575043694:789..846 | TCONS_00027070-exon-sc0000606-1575043694:789..846 | Clytia hemisphaerica | exon |
| TCONS_00027070-exon-sc0000606-1491911889:2034..2319 | TCONS_00027070-exon-sc0000606-1491911889:2034..2319 | Clytia hemisphaerica | exon |
| TCONS_00027070-exon-sc0000606-1510915933:2034..2319 | TCONS_00027070-exon-sc0000606-1510915933:2034..2319 | Clytia hemisphaerica | exon |
| TCONS_00027070-exon-sc0000606-1575043694:2034..2319 | TCONS_00027070-exon-sc0000606-1575043694:2034..2319 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000606 | supercontig | sc0000606:789..2319 + |
Blast
The following BLAST results are available for this feature:
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