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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027122 ID=TCONS_00027122|Name=TCONS_00027122|organism=Clytia hemisphaerica|type=transcript|length=543bp
TTAAATTCGCTAGCACTATCTGATGATGAATTTTCATCTCTACTTTTGCT
TTACTCTGCTATATTTTGCAACAGAATTGACATCATCCTGGGTTGGATTG
CCTCTGATTGTTTCCGAGGACCAAAAGTCTAATGCTCCAGAATGGCCACC
TTATTTCACGACCGAATGGATTATCTATGATACTCCGGTCGAAAATCCTG
GACCTCCATTTGCAGACCAACCGATTAAGACACCATTCAGAGCAGGTCAT
GGTTGGACGTACTACGATTGGGAAAGAAAAAGTATCCTCGAACTATATGA
TGATTTTTGTTTGCCGATATTCGAGAAGGACCCAGATTGGAGATGTCACT
TTCTTAATACAAACGAGACTTCCTTTCTGATCAGTTTACATCCTTCCTCA
CCATACCCTGAATGTTGCATTTTcggtaagaaaaattttaatttccccAA
CATTATTATTCTGCCATATTTTCTTCAAGGAAATCTATTTATTCCAAGAA
TGCATTGACTATCTTTATTATTATCAAAGACAAAATATAAAGG Run BLAST on NCBI transcript from alignment at sc0000607:80962..82714+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027122 ID=TCONS_00027122|Name=TCONS_00027122|organism=Clytia hemisphaerica|type=transcript|length=1753bp|location=Sequence derived from alignment at sc0000607:80962..82714+ (Clytia hemisphaerica)
TTAAATTCGCTAGCACTATCTGATGATGAATTTTCATCTCTACTTTTGCT
TTACTCTGCTATATTTTGCAACAGAATTGACATCATCCTGGGTTGGATTG
CCTCTGATTGTTTCCGAGGACCAAAAGGTAAGTTACCTTGTatttttaac
acccctgtctcactaaTACAAAAAAGGGTTAAACAAGTTAAAAGCTTTCT
TGTAACAACGTCGGTTCTCTATCAAAAGGGGTTCGAAAATAAAAACCGGT
ATTATAACTCGGAGGTTGGGACACTCAAGGTAAACAACCTACCTTAAGGG
TGCGTTTTTTCAATTTCCTTGAAGCCAAAATGAGCGAAGATGAGTGAAAG
TGCATcctaagggtgtaaaaagtgagcaaaacgaagttttttaggcaaaa
tctttgaaaaatatgaccACTTTATTGCCTTAAAATGGACAAAGATTTTC
AAGAACATACACTCCAATTTGACTCTgactaaattttctctgcactgtca
GGGTCAAatctcaatcattttcgtttattttgacttaaaaaaaagctatt
tctctaccccttacttcccttgcagttttgcctatggcgtcactattttg
gtcataaaaagttttcccgggcctaatccgcatcctccctctcaaaaata
tcttgtaatatactgttcttttgaatagactaaaaatggctaggtcgtag
aaaagatgccacgggaccccaggcttggccctcTACTACATAGagaattg
ttgttttttttcaccaATGTTGAAGCTACAATACTGGTCAAATTTGATTT
AAGTTTGCGTGaaaattattgattttaattttaaatcacTTAAAATCAAT
TgcgattttaaaatctttagataATATTCCTATTTTTCTCCAAATATTAT
GGCCTACATCGTAGAATcaatacaaaattttcaattaaaaatctCCTGGT
AGCCTTGAGGTCAAACGCACAATAACACTCAGCGCTTACACTCTGTGTGC
AGTTATTGACTCCAAAGACTCTTTTGATAAGTCAAATTTCATGGTCTTTT
ACCACAGATGTCTTATATATAGCACTGATTGGGCTTCCCCGTCCATAGCT
GAAGCAAATTAATACACCGTCTTTAATAAGTAGACCAGTGTGCCAGCAAC
TTGACTGATCAAGACTTGTACAGTTTCAGCTTCTCGCTTTGCGCTAGTAA
GTTGTTTGTTCTTGTTGAACAAATTGACGGAACCGAACTGGGCTTGACTT
AATTGTGGTTTACTCAGCACAGATGGCGCATTGTTTTGCTTCAACTTTCC
GTAGCTCTTCTACTGTTTTTACCGATATGTGTTTTAGTCTAATGCTCCAG
AATGGCCACCTTATTTCACGACCGAATGGATTATCTATGATACTCCGGTC
GAAAATCCTGGACCTCCATTTGCAGACCAACCGATTAAGACACCATTCAG
AGCAGGTCATGGTTGGACGTACTACGATTGGGAAAGAAAAAGTATCCTCG
AACTATATGATGATTTTTGTTTGCCGATATTCGAGAAGGACCCAGATTGG
AGATGTCACTTTCTTAATACAAACGAGACTTCCTTTCTGATCAGTTTACA
TCCTTCCTCACCATACCCTGAATGTTGCATTTTcggtaagaaaaatttta
atttccccAACATTATTATTCTGCCATATTTTCTTCAAGGAAATCTATTT
ATTCCAAGAATGCATTGACTATCTTTATTATTATCAAAGACAAAATATAA
AGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027122-exon-sc0000607-1491911889:80962..81088 | TCONS_00027122-exon-sc0000607-1491911889:80962..81088 | Clytia hemisphaerica | exon |
| TCONS_00027122-exon-sc0000607-1510915933:80962..81088 | TCONS_00027122-exon-sc0000607-1510915933:80962..81088 | Clytia hemisphaerica | exon |
| TCONS_00027122-exon-sc0000607-1575043694:80962..81088 | TCONS_00027122-exon-sc0000607-1575043694:80962..81088 | Clytia hemisphaerica | exon |
| TCONS_00027122-exon-sc0000607-1491911889:82299..82714 | TCONS_00027122-exon-sc0000607-1491911889:82299..82714 | Clytia hemisphaerica | exon |
| TCONS_00027122-exon-sc0000607-1510915933:82299..82714 | TCONS_00027122-exon-sc0000607-1510915933:82299..82714 | Clytia hemisphaerica | exon |
| TCONS_00027122-exon-sc0000607-1575043694:82299..82714 | TCONS_00027122-exon-sc0000607-1575043694:82299..82714 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000607 | supercontig | sc0000607:80962..82714 + |
Blast
The following BLAST results are available for this feature:
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