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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027145 ID=TCONS_00027145|Name=TCONS_00027145|organism=Clytia hemisphaerica|type=transcript|length=287bp
GTTCAGACAAGATCGGTCAACaaaaagattacaccaaagcaCAACGATTT
GGGTATTGTTATAGTTGTCATAATGGAATTCAAGATATGGttactcgaat
gaaagtttttttcaaaagcctTCAAGAATTATATTCTCTAACAAACGAAT
ACTTGATTGACACAATCACCAAGAAAATCAACGAAGAATTGTCACGCCAA
AGCAAGCAAATGTACAACTCCTCGCATGCCCTTCATCTTCTTGAAACAGC
CGAGCTTATCGAGTCAGAAAATCTCAAAACGGCCTGC Run BLAST on NCBI transcript from alignment at sc0000607:171787..173018- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027145 ID=TCONS_00027145|Name=TCONS_00027145|organism=Clytia hemisphaerica|type=transcript|length=1232bp|location=Sequence derived from alignment at sc0000607:171787..173018- (Clytia hemisphaerica)
GTTCAGACAAGATCGGTCAACAAAAAGATTACACCAAAGCACAACGATTT
GGTACGTAAAGTTGGTATAAATCGTGTTTTGGTTTAAATGAATTTGAGCA
AATTTCGACTGATCATCAATCTGATTAAAAGCAGAAAATGTTGATTTTCA
TAACCCATCTTGTGCAAAATACTTTGCCATAATTTTTATCCTAACTGACT
TGAAATTGTGCTAGCGGTCCAGCGATTTGATTGACAGAAAAGTTCTTCAA
TTTTATCTTCAGGGTATTGTTATAGTTGTCATAATGGAATTCAAGATATG
GGTGGTAAGTTTTCATTTTCTGACATATGTAAATTATGATTATTATCCAT
ATAGCGGTCATTAAGTAAGCCATTAAAGGTTCAATCGGCGGGCGGTATTG
AAAGGTTTTGTGACTCAAATTGTCATACCCGCGCTGAGGAAACTAAAGCG
CCAGGCATCAGAGGGCTGAAATATTATTAACCGCCCGGGTATAGGGCAAT
AACGTCATTTGCGACCCGCTCGTAATTGGATTGAAGTCGTTGCATTGAAG
CGAAGAGACTAAACTAACGTCACTTTTTGGTCATTTGCGGCCCGCTCGCA
ATGTGCTAAAAGTTTGTTGAAGACATTGCATTGAAGCGAAAAGACTTGGT
TGACGCTAGAAAAAAACGTTGTTTGAATGTCCGATATGGATAATAATAGT
AATGGCGTTAAGTTTTCGTCCGACCTCAAACTGAACGCTATTGTTATATT
TAATAAATTGATTTAACCAAGCATCCTTACATCGAAGTTATAATCAAAAA
TCAATCAATTAGGTCTATTTTGCCAAATTGTGCTCCAAAAAGTTTTTTAA
GTAAGGGACTCTAGTCCAGTATATAACTTATCTTTTAATCTTCCCCTTCT
GCAGAGGTTTTTAAAACCCACTGTATGATTTCATATTATTAATACAGCTG
TTTTTATCTCCAGAGCTTTACAGACAAGGGCTCGGGTATTGTAGCTGACT
TACAATGACTTTTTATTCGGCTTTTTTTTTTTCAGTTACTCGAATGAAAG
TTTTTTTCAAAAGCCTTCAAGAATTATATTCTCTAACAAACGAATACTTG
ATTGACACAATCACCAAGAAAATCAACGAAGAATTGTCACGCCAAAGCAA
GCAAATGTACAACTCCTCGCATGCCCTTCATCTTCTTGAAACAGCCGAGC
TTATCGAGTCAGAAAATCTCAAAACGGCCTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027145-exon-sc0000607-1575043694:172968..173018 | TCONS_00027145-exon-sc0000607-1575043694:172968..173018 | Clytia hemisphaerica | exon |
| TCONS_00027145-exon-sc0000607-1575043694:172718..172756 | TCONS_00027145-exon-sc0000607-1575043694:172718..172756 | Clytia hemisphaerica | exon |
| TCONS_00027145-exon-sc0000607-1575043694:171787..171983 | TCONS_00027145-exon-sc0000607-1575043694:171787..171983 | Clytia hemisphaerica | exon |
| TCONS_00027145-exon-sc0000607-1510915933:172968..173018 | TCONS_00027145-exon-sc0000607-1510915933:172968..173018 | Clytia hemisphaerica | exon |
| TCONS_00027145-exon-sc0000607-1510915933:172718..172756 | TCONS_00027145-exon-sc0000607-1510915933:172718..172756 | Clytia hemisphaerica | exon |
| TCONS_00027145-exon-sc0000607-1510915933:171787..171983 | TCONS_00027145-exon-sc0000607-1510915933:171787..171983 | Clytia hemisphaerica | exon |
| TCONS_00027145-exon-sc0000607-1491911889:172968..173018 | TCONS_00027145-exon-sc0000607-1491911889:172968..173018 | Clytia hemisphaerica | exon |
| TCONS_00027145-exon-sc0000607-1491911889:172718..172756 | TCONS_00027145-exon-sc0000607-1491911889:172718..172756 | Clytia hemisphaerica | exon |
| TCONS_00027145-exon-sc0000607-1491911889:171787..171983 | TCONS_00027145-exon-sc0000607-1491911889:171787..171983 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000607 | supercontig | sc0000607:171787..173018 - |
Blast
The following BLAST results are available for this feature:
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