TCONS_00027164 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027164
Unique NameTCONS_00027164
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length798

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027164 ID=TCONS_00027164|Name=TCONS_00027164|organism=Clytia hemisphaerica|type=transcript|length=798bp
GAGGACGAGGATAAATCGAGACCAAAGTGAACACTAAAGAATTTGTTTGA
ATTAGAGAGCTAATCAACCATGAGAAGTTTAACATTACTTTTGGTCAGTG
CCATCATTGGCTTAACTTATGCAGgcTACTATCCACGCCCAAACTTTTGT
AAAGGTGTGACCTGCAAGAACAAAGGCAAATGTAAAAGCCTTTATACCTC
ATTTAAATGTGAATGCAAGAAAGGATTCACTGGAAAATTCTGTCAAACCA
ACATCAATGATTGCAAGAGAAATAGCTGCAAgaacggaggaaaatgcaaa
gATCTTGTCAATGGTTTCAAATGTCAATGCAAGAAAGGATTCACAGGAAA
ATTCTGTCAAACCAACATCAATGATTGCAAGAGAAATAGCTGCAAgaacg
gaggaaaatgcaaagACCTTATCAATGGTTTCAAATGCCAATGCAAGAAA
GGATTCACTGGAAAATTCTGTCAAACCAACATCAATGATTGCAAGAGAAA
TAGCTGCAAgaacggaggaaaatgcaaagATCTCGTCAATGGTTTCAAAT
GTCAATGCAAGAAAGGATTCACTGGAAAATTCTGTCAAACCAACATCAAT
GATTGCAAGAGAAATAGCTGCAAGGacggaggaaaatgcaaagATCTTGT
CAATGGTTTCAAATGTCAATGCAAGAAAGGATTCACTGGAAAATTCTGCC
AAACCAACATCAACGATTGCAAGAGAAATAGCTGCAAgaacggaggaaaa
tgcaaagATCTTGTCAATGGTTTCAAATGTGAATGCAAGAAAGGATTC
Run BLAST on NCBI

protein sequence of TCONS_00027164-protein

>TCONS_00027164-protein ID=TCONS_00027164-protein|Name=TCONS_00027164-protein|organism=Clytia hemisphaerica|type=polypeptide|length=243bp
MRSLTLLLVSAIIGLTYAGYYPRPNFCKGVTCKNKGKCKSLYTSFKCECK
KGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNI
NDCKRNSCKNGGKCKDLINGFKCQCKKGFTGKFCQTNINDCKRNSCKNGG
KCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKDGGKCKDLVNGFKCQ
CKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCECKKGF
Run BLAST on NCBI

transcript from alignment at sc0000608:125726..127820+

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027164 ID=TCONS_00027164|Name=TCONS_00027164|organism=Clytia hemisphaerica|type=transcript|length=2095bp|location=Sequence derived from alignment at sc0000608:125726..127820+ (Clytia hemisphaerica)
GAGGACGAGGATAAATCGAGACCAAAGTGAACACTAAAGAATTTGTTTGA
ATTAGAGGTAAGAACAAAAACATATCTTTTGAATTCTAGACCTAAATTTC
TACCAGTTTGAAACACATTTTTGATGTTTCGtatcttcaaatttatttta
CCTATACGTCATATTTCCATTTCAGTTATTACGTTACAGTTAagcatccc
cttctcacagacccactcgGAACCCTTTCTactgaaaaaattggccaaaa
tatcttccccagtggaaaattatactttagtttttgtccccactgaaaat
aatcagatcagcgaatcctcactgtaaaatattGTGCTTCTTTTTTCATC
CACACTGAATTTACtgatttgaaaacaatggaattaaaATCCCCAGCCGT
AAATAAGATGAAAAGaacaatccccatcgagttttggtccgttgNGAATT
AAAATCCCCAGCCGTAAATAAGATGAAAAGAACAATCcgcatcgagtttt
ggtccgttatttttatctccacaagctgaaaaatcccaccgggtctgtga
gaaggggctgTAGTTAAACTATATCtggaaaattaatttcaaaattgtct
CGTTTTGTTTAGAGCTAATCAACCATGAGAAGTTTAACATTACTTTTGGT
CAGTGCCATCATTGGCTTAACTTATGCAGGTTTGTGAATATTTTACAATC
AATTATGATGGGcatcatttttttaacaaatacaGATGTTTCAtttgtac
acccctgtctcacagccccggtggaactttttcctcagtggggataaaaa
ctcttatcaaaatcccaatggggatagaaattccattgttccaaggttaa
aaaatccagtggtgagggttttggagtgcaatcttgaaactttgaatttc
tatttgggataaaatcaaaatcaatatcTGGGATAtagggctgaaatttc
agggtattttcccaccgNTTTgggataaaatcaaaatcaatatcTGGGAT
AtagggctgaaatttcagggtttTTTCCCACCTGGGACGAAATTTCTGCC
TAATTTCCCTGTGACACAGGGGCGTATTTGTAAACATTAAAAGGGTCGTT
TGACTTTTGAATAATAGAATTACAAAATTGGTTATTGACTTTTATTGACC
CGGGGTGAGGTACTttgattttatcgattttagCATGTACTTAATTTGCC
GGTTGgcgaaaatgggatttttggCAGGTATTTAATAAGGCAGATAGGGA
AATTTTAAGCGGTTGTAAAAAattactttgtattttaatattttttacta
ttatacttaaaaatgctGATTCTTGGTAGAATTTCTATCCTAAATATGAT
TTTGTTATATTTGGCGGCTGATTTAGACTTGATGATCTTAGACTTGTAca
agttttctttttaattttcaggcTACTATCCACGCCCAAACTTTTGTAAA
GGTGTGACCTGCAAGAACAAAGGCAAATGTAAAAGCCTTTATACCTCATT
TAAATGTGAATGCAAGAAAGGATTCACTGGAAAATTCTGTCAAACCAACA
TCAATGATTGCAAGAGAAATAGCTGCAAgaacggaggaaaatgcaaagAT
CTTGTCAATGGTTTCAAATGTCAATGCAAGAAAGGATTCACAGGAAAATT
CTGTCAAACCAACATCAATGATTGCAAGAGAAATAGCTGCAAgaacggag
gaaaatgcaaagACCTTATCAATGGTTTCAAATGCCAATGCAAGAAAGGA
TTCACTGGAAAATTCTGTCAAACCAACATCAATGATTGCAAGAGAAATAG
CTGCAAgaacggaggaaaatgcaaagATCTCGTCAATGGTTTCAAATGTC
AATGCAAGAAAGGATTCACTGGAAAATTCTGTCAAACCAACATCAATGAT
TGCAAGAGAAATAGCTGCAAGGacggaggaaaatgcaaagATCTTGTCAA
TGGTTTCAAATGTCAATGCAAGAAAGGATTCACTGGAAAATTCTGCCAAA
CCAACATCAACGATTGCAAGAGAAATAGCTGCAAgaacggaggaaaatgc
aaagATCTTGTCAATGGTTTCAAATGTGAATGCAAGAAAGGATTC

Coding sequence (CDS) from alignment at sc0000608:125726..127820+

>TCONS_00027164 ID=TCONS_00027164|Name=TCONS_00027164|organism=Clytia hemisphaerica|type=CDS|length=1458bp|location=Sequence derived from alignment at sc0000608:125726..127820+ (Clytia hemisphaerica)
ATGAGAAGTTTAACATTACTTTTGGTCAGTGCCATCATTGGCTTAACTTA
TGCAGgcTACTATCCACGCCCAAACTTTTGTAAAGGTGTGACCTGCAAGA
ACAAAGGCAAATGTAAAAGCCTTTATACCTCATTTAAATGTGAATGCAAG
AAAGGATTCACTGGAAAATTCTGTCAAACCAACATCAATGATTGCAAGAG
AAATAGCTGCAAgaacggaggaaaatgcaaagATCTTGTCAATGGTTTCA
AATGTCAATGCAAGAAAGGATTCACAGGAAAATTCTGTCAAACCAACATC
AATGATTGCAAGAGAAATAGCTGCAAgaacggaggaaaatgcaaagACCT
TATCAATGGTTTCAAATGCCAATGCAAGAAAGGATTCACTGGAAAATTCT
GTCAAACCAACATCAATGATTGCAAGAGAAATAGCTGCAAgaacggagga
aaatgcaaagATCTCGTCAATGGTTTCAAATGTCAATGCAAGAAAGGATT
CACTGGAAAATTCTGTCAAACCAACATCAATGATTGCAAGAGAAATAGCT
GCAAGGacggaggaaaatgcaaagATCTTGTCAATGGTTTCAAATGTCAA
TGCAAGAAAGGATTCACTGGAAAATTCTGCCAAACCAACATCAACGATTG
CAAGAGAAATAGCTGCAAgaacggaggaaaatgcaaagATCTTGTCAATG
GTTTCAAATGTGAATGCAAGAAAGGATTCATGAGAAGTTTAACATTACTT
TTGGTCAGTGCCATCATTGGCTTAACTTATGCAGgcTACTATCCACGCCC
AAACTTTTGTAAAGGTGTGACCTGCAAGAACAAAGGCAAATGTAAAAGCC
TTTATACCTCATTTAAATGTGAATGCAAGAAAGGATTCACTGGAAAATTC
TGTCAAACCAACATCAATGATTGCAAGAGAAATAGCTGCAAgaacggagg
aaaatgcaaagATCTTGTCAATGGTTTCAAATGTCAATGCAAGAAAGGAT
TCACAGGAAAATTCTGTCAAACCAACATCAATGATTGCAAGAGAAATAGC
TGCAAgaacggaggaaaatgcaaagACCTTATCAATGGTTTCAAATGCCA
ATGCAAGAAAGGATTCACTGGAAAATTCTGTCAAACCAACATCAATGATT
GCAAGAGAAATAGCTGCAAgaacggaggaaaatgcaaagATCTCGTCAAT
GGTTTCAAATGTCAATGCAAGAAAGGATTCACTGGAAAATTCTGTCAAAC
CAACATCAATGATTGCAAGAGAAATAGCTGCAAGGacggaggaaaatgca
aagATCTTGTCAATGGTTTCAAATGTCAATGCAAGAAAGGATTCACTGGA
AAATTCTGCCAAACCAACATCAACGATTGCAAGAGAAATAGCTGCAAgaa
cggaggaaaatgcaaagATCTTGTCAATGGTTTCAAATGTGAATGCAAGA
AAGGATTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015271XLOC_015271Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027164-proteinTCONS_00027164-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027164-exon-sc0000608-1491911889:125726..125782TCONS_00027164-exon-sc0000608-1491911889:125726..125782Clytia hemisphaericaexon
TCONS_00027164-exon-sc0000608-1510915933:125726..125782TCONS_00027164-exon-sc0000608-1510915933:125726..125782Clytia hemisphaericaexon
TCONS_00027164-exon-sc0000608-1575043694:125726..125782TCONS_00027164-exon-sc0000608-1575043694:125726..125782Clytia hemisphaericaexon
TCONS_00027164-exon-sc0000608-1491911889:126338..126404TCONS_00027164-exon-sc0000608-1491911889:126338..126404Clytia hemisphaericaexon
TCONS_00027164-exon-sc0000608-1510915933:126338..126404TCONS_00027164-exon-sc0000608-1510915933:126338..126404Clytia hemisphaericaexon
TCONS_00027164-exon-sc0000608-1575043694:126338..126404TCONS_00027164-exon-sc0000608-1575043694:126338..126404Clytia hemisphaericaexon
TCONS_00027164-exon-sc0000608-1491911889:127147..127820TCONS_00027164-exon-sc0000608-1491911889:127147..127820Clytia hemisphaericaexon
TCONS_00027164-exon-sc0000608-1510915933:127147..127820TCONS_00027164-exon-sc0000608-1510915933:127147..127820Clytia hemisphaericaexon
TCONS_00027164-exon-sc0000608-1575043694:127147..127820TCONS_00027164-exon-sc0000608-1575043694:127147..127820Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000608supercontigsc0000608:125726..127820 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0.188554	0.275677	1.65347	1.79026	7.20731	2.41868	1.7244	2.47615	0.50254	0.410353	335.636	19.5054	0.630329	0.139039	0.158167	0	0.0582375	0	0	0	0.129341	0	0	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000742EGF-like_dom
IPR001881EGF-like_Ca-bd_dom
IPR013032EGF-like_CS
IPR000152EGF-type_Asp/Asn_hydroxyl_site
IPR018097EGF_Ca-bd_CS
Vocabulary: Molecular Function
TermDefinition
GO:0005509calcium ion binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005509 calcium ion binding
Blast
[Close]
BLAST of TCONS_00027164 vs. Swiss-Prot (Human)
Match: JAG1 (Protein jagged-1 OS=Homo sapiens GN=JAG1 PE=1 SV=3)

HSP 1 Score: 202.216 bits (513), Expect = 3.234e-58
Identity = 94/219 (42.92%), Postives = 136/219 (62.10%), Query Frame = 1 
Query:  142 NFCKGVTCKNKGKCKSLYTSFKCECKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLINGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKDGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCECKKGF 798
            + C    C N+G CK     F+CEC  G+TG  C TNI+DC  N+C +GG C+DLVNGFKC C   +TGK CQ + N+C+   C N   CK+LI  + C C  G+ G+ C  NINDC    C+N   C+DLVNG++C C  G+ G  C+ +I++C  N C +GG C++ +N F+C C  GF+G  CQ +I+ C+ N C+NG +C +  + + C+C + +
Sbjct:  338 HACLSDPCHNRGSCKETSLGFECECSPGWTGPTCSTNIDDCSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEAKPCVNAKSCKNLIASYYCDCLPGWMGQNCDININDC-LGQCQNDASCRDLVNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPNPCQNGAQCYNRASDYFCKCPEDY 555

HSP 2 Score: 193.356 bits (490), Expect = 4.996e-55
Identity = 104/217 (47.93%), Postives = 128/217 (58.99%), Query Frame = 1 
Query:  160 TCKNKGKCKSLYTS-FKCECKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLINGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNIN-DCKRNSCKDGGKCKDLVNG--FKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCECKKGF 798
             C   GKCKS     F C+C KGFTG +C  NINDC+ N C+NGG C D VN +KC C  G+ G +C+TNINDC +N C NGG C+DL+N F C CK G+ GK C +  + C   +C NGG C D  + FKC C  G+ G  C    N  C  N C +GG C  +VNG  F C CK+G+ G  C  N NDC  + C N G C D  N ++CEC  GF
Sbjct:  598 VCGPHGKCKSQSGGKFTCDCNKGFTGTYCHENINDCESNPCRNGGTCIDGVNSYKCICSDGWEGAYCETNINDCSQNPCHNGGTCRDLVNDFYCDCKNGWKGKTCHSRDSQCDEATCNNGGTCYDEGDAFKCMCPGGWEGTTCNIARNSSCLPNPCHNGGTC--VVNGESFTCVCKEGWEGPICAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGF 812

HSP 3 Score: 189.119 bits (479), Expect = 1.285e-53
Identity = 91/215 (42.33%), Postives = 131/215 (60.93%), Query Frame = 1 
Query:  154 GVTCKNKGKCKSLYTSFKCECKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLINGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKDGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCECKKGF 798
            G TC N G  K     ++C C +G++G  C+   + C  + C N G CK+   GF+C+C  G+TG  C TNI+DC  N+C +GG C+DL+NGFKC C   +TGK CQ + N+C+   C N   CK+L+  + C C  G+ G+ C  NINDC    C++   C+DLVNG++C C  G+ G  C+ +I++C  N C NGG C++ +N F+C C  GF
Sbjct:  309 GGTCSNTGPDK-----YQCSCPEGYSGPNCEIAEHACLSDPCHNRGSCKETSLGFECECSPGWTGPTCSTNIDDCSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEAKPCVNAKSCKNLIASYYCDCLPGWMGQNCDININDC-LGQCQNDASCRDLVNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLCPTGF 517

HSP 4 Score: 184.111 bits (466), Expect = 6.865e-52
Identity = 97/222 (43.69%), Postives = 126/222 (56.76%), Query Frame = 1 
Query:  142 NFCKGVTCKNKGKCKSLYTSFKCECKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLINGFKCQCKKGFTGKFCQTNIN-DCKRNSCKNGGKCKDLVNG--FKCQCKKGFTGKFCQTNINDCKRNSCKDGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCECKKGF 798
            N C+   C+N G C     S+KC C  G+ G +C+TNINDC +N C NGG C+DLVN F C CK G+ GK C +  + C   +C NGG C D  + FKC C  G+ G  C    N  C  N C NGG C  +VNG  F C CK+G+ G  C  N NDC  + C + G C D  N ++C+C  GF G  C+ NIN+C+ + C  G  C D +NG++C C  G 
Sbjct:  631 NDCESNPCRNGGTCIDGVNSYKCICSDGWEGAYCETNINDCSQNPCHNGGTCRDLVNDFYCDCKNGWKGKTCHSRDSQCDEATCNNGGTCYDEGDAFKCMCPGGWEGTTCNIARNSSCLPNPCHNGGTC--VVNGESFTCVCKEGWEGPICAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAFGATCVDEINGYRCVCPPGH 850

HSP 5 Score: 176.407 bits (446), Expect = 3.261e-49
Identity = 96/247 (38.87%), Postives = 133/247 (53.85%), Query Frame = 1 
Query:  142 NFCKGVTCKNKGKCKSLYTSFKCECKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLINGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCK---------------------------RNSCKDGGKCKDLVNG-FKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCECKKGF 798
            N C+   C N   CK+L  S+ C+C  G+ G+ C  NINDC    C+N   C+DLVNG++C C  G+ G  C+ +I++C  N C NGG C++ IN F+C C  GF+G  CQ +I+ C+ N C+NG +C +  + + C+C + + GK C    + C+                            N C   GKCK    G F C C KGFTG +C  NINDC+ N C+NGG C D VN +KC C  G+
Sbjct:  414 NECEAKPCVNAKSCKNLIASYYCDCLPGWMGQNCDININDC-LGQCQNDASCRDLVNGYRCICPPGYAGDHCERDIDECASNPCLNGGHCQNEINRFQCLCPTGFSGNLCQLDIDYCEPNPCQNGAQCYNRASDYFCKCPEDYEGKNCSHLKDHCRTTPCEVIDSCTVAMASNDTPEGVRYISSNVCGPHGKCKSQSGGKFTCDCNKGFTGTYCHENINDCESNPCRNGGTCIDGVNSYKCICSDGW 659

HSP 6 Score: 134.806 bits (338), Expect = 8.614e-35
Identity = 73/199 (36.68%), Postives = 111/199 (55.78%), Query Frame = 1 
Query:  208 CECKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNINDC-KRNSCKNGGKCKDL-INGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKDGGKCKDLVNGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCECKKGF 798
            C C+ G+ G +C   I       C +G  C +    ++C C+  + G+ C  ++N C     C NGG C +   + ++C C +G++G  C+   + C  + C N G CK+   GF+C+C  G+TG  C TNI+DC  N+C  GG C+DLVNGFKC C   +TGK CQ + N+C+   C N   CK+L+  + C+C  G+
Sbjct:  251 CRCQYGWQGLYCDKCI---PHPGCVHG-ICNE---PWQCLCETNWGGQLCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEIAEHACLSDPCHNRGSCKETSLGFECECSPGWTGPTCSTNIDDCSPNNCSHGGTCQDLVNGFKCVCPPQWTGKTCQLDANECEAKPCVNAKSCKNLIASYYCDCLPGW 442

HSP 7 Score: 114.775 bits (286), Expect = 5.216e-28
Identity = 64/156 (41.03%), Postives = 83/156 (53.21%), Query Frame = 1 
Query:  130 YPRPNFCKGVTCKNKGKCKSLYTSFKCECKKGFTGKFCQTNIND-CKRNSCKNGGKCKDLVNG--FKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLINGFKCQCKKGFTGKFCQTNINDCKRNSCKNGGKCKDLVNGFKCQCKKGFTGKFCQ 588
            + R + C   TC N G C     +FKC C  G+ G  C    N  C  N C NGG C  +VNG  F C CK+G+ G  C  N NDC  + C N G C D  N ++C+C  GF G  C+ NIN+C+ + C  G  C D +NG++C C  G +G  CQ
Sbjct:  703 HSRDSQCDEATCNNGGTCYDEGDAFKCMCPGGWEGTTCNIARNSSCLPNPCHNGGTC--VVNGESFTCVCKEGWEGPICAQNTNDCSPHPCYNSGTCVDGDNWYRCECAPGFAGPDCRININECQSSPCAFGATCVDEINGYRCVCPPGHSGAKCQ 856
The following BLAST results are available for this feature:
BLAST of TCONS_00027164 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
JAG13.234e-5842.92Protein jagged-1 OS=Homo sapiens GN=JAG1 PE=1 SV=3[more]
back to top