TCONS_00027192 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027192
Unique NameTCONS_00027192
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4112

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027192 ID=TCONS_00027192|Name=TCONS_00027192|organism=Clytia hemisphaerica|type=transcript|length=4112bp
AATTCATGCTTTGTGATGGTGATCCTGATTGGTTAGATTCGATAGAAAAC
ATTCCCAACAAGTTAAAGAAATTGTTCACACTCAACAAACTGTTGGCTCA
TCAACCATGGCTTATCAATGTCGACGTATTAAAGGATTTTTTTACTGGAC
CTGCGGAGGAGACGTGGTCAATGTCTGAACTACTTCATGCAATCTTGGTG
TTACTACACTTCCAAACTTTATCTGGATTCATCTTCGGGTGTGGCATCAA
TCCGGAAATCGATTCGCGTAAAGGTCACACTAAACGTTCTCCATCCTCAG
GGGAGTACACGTCGGGCGGTAGTGAACCCATCACGCCCACAAAAATCGGG
CGTGTGAAGGCGGGCAGTTTTGTGGACGATTCATCTACACAACAATTGTT
CGAGAAAATGTTAAAGGTACAAGAAGAATATGAATTGTCTTCGCAAGATG
GCGAGGATGACGGCACCGATGATGAAAAGTTGAGACAGTTCAAAGAAGTC
GCCGAAACAAACGAAGAACACGAAATGGAGGAATTTGATACTCCTCAGAA
TCGCTTCAACCAATACCTCGATGACAAGCAATTCCATTACAAAGAATATG
CCAAGAGGGAGAAAAAGGATACTGAAGTGTTCAGAGCACATGATTACAAC
TGGCAAGAACACTGTTTCGCTTTCGTAAATAGACTCTACCCAAATATTGG
ACCCTATCTGGATGGAAAGTTCAACTGTTCATTTGACTTGACCTACAACA
GTATGGGAGGAAACTACACGGATGTTGACACTTCCAAATTTCGATTGGCT
ACATGGAATTACATTCACCTTATCTATGGAATTTTTCACGATGACTATCT
TTATGTCGAGGTCAACAAATTGTTAGAAAAGCCGTACAAGAGTTATATCA
AGAAAGTGGCGTGTTTTCCTGAACGCATCACATTCCTTGATTACTGGGAG
TTTTATTCAGACTTTCTACCATCTGAAAAGGTTCACATCAACTTGTTAGT
GTTAGAGTCAAGATTTCAAGCAGCGTTACTGTACGTGTCCAGAGCTTTGA
TGAAACACATGGATAACAAGAACTGACCTTTGGTGAATGTAGTAAGAATG
ACGAGGTGGTGAAAAAGAGGTAGTGTAGTTGTTAACTAGTTGTTGGGGAT
GGATGAGGCGGATCGAGATGCTCTGTCTTTCAAAAGAAGCTGGTTTAGTT
GCATTGCAATCTCCATTCTGGTTTTGGTATGTGATCCAGGGTTTTTAAGA
TCACCTTAACCAATTGATAAAAAGAATGGATTTTCATGTTGACTTGGATG
GGAACCGAATCAAATCGGGTCCCGTATTTCCNGGAATGGATTTTTATGTT
GACTTGGATGGGAACCGAATCAAATCGGATACCGTATTTCCTCAAATAAG
CGCTACGGGGCTCATTTAATTTTAGGTGCGACGGAGATGCTTATTTCGAA
AATGCGAGTTTCCAAGTTTCTGAAgtattcactttttttacaaatttgat
tGATTCGTCGGTTGATAAAATAAACTTTGGGCTCTATCCGGGGAGTTAGA
AACCGAACTTTTAAGAAAGAATATTAACAGGATTGTGATGTTTTCTCTTT
TCttacttaaaaaaaatgaataaagaaaacaatCTTTAAACTTCAAACTC
TAATAAGAGCTGCATTTGAATGCTTATTAGACGGAGGGTGGCACTTTATG
TAGGAAGTACGGTATTCGATATACAATCCGCTAAATTAATGTGGTAATGT
GAAAGGTAAGGCTAGCTAAGACatgaataaaatgttttttttatgtcaTG
CATAAACGAGATTTTATGTATTTaatgataatgaaatctttgaaTGTAGG
ATGACACCCCGatcctttttgttttctttaccagtagacaaaaaaatata
aattgtgttgtgttttttatggctttagaattgtatgaaaaaaaaacttg
tatagTTATTCTAtgatttttatataatatttgtgatttttatgtttctt
tGTTGTATCGTCATAGACGAACTCTAAAATTAGAAACTTTTCAAGATAAT
TCGAAAGGTTTGACTTAATGTAATGACACTAGAGTCAATTTAACATCCGA
TTCTTGTTTTGATTAATAGTTATACGGTCTTCATAGAAAAGGGTCGTGAG
AAATGCATGCGAAATTTGTCGGTCCCGTATCAGCTGACGAGAGCATGGCT
TAAAACTTCGAAAATTGGGATCAACCCTCTGTGACGTAACACATCATCGT
ACCCctcttttttatgcttttgaTATCACGTGATCGTGTGTATTTGGATT
TATTAGTAAGAAtgagctcttccagaaaatttttggatatattggatatt
ttgtccgggggttaGTGAAAAATTTGTAGAATTTGCCTtgtttggggggc
aaatttgctCTGCTCAACTGATGCCTTCTGGGGTAATATCTGTTGTCAGG
GGGTCATAATTCACTATgtgggtaaatttccaaaaaacgtCATATCCTAC
ACCCCCCTCCccgatattcattttttttctggaaaagcccaatgtccATT
ATTTCCTCTCTGCACCAATCATCTTACGTGATATGCTTCAATAGATTTAT
TATTTTAAcccaacaacaaaaaatataattaaaatgaTTTAATTGCAATT
TCTGATACTATGTATTATTTTTTacaatctttttttataaaagggttact
tttaaacaaagaaatatttccTTTTAGTGATTTTTATCTCAATTTTCTCT
TGGGACCTAACTTTAACATAGTAATCATTCatttgtttattgtttttgtt
attgttgttgtttgttttttttattgtggctttctttttaactttttgag
aaacAACCGAACTCTCTAAAAGTACAGGTACTAGAATGACGTTTTAATCT
ACATTtggaattttaaattcttttatttaaggGGGTTGTGAAATGCTTTT
CGAGGCACCTGTTTTCagttattttgttcttatttttcgccattccttgt
ttgtttgttagttttgttttgttttttttcctctaaaacagaaatttttc
atttttattttatttacgtAGATTATAAAGAGCAGCCAGTCCAGAATTTT
GTGTCGAGTTTTATTAAAcaaaaattctgaatttttcTATAAACTTCTTA
TAAGCATACCTTGGCTAATTTTTTGGTTTTCGGCCTCAAAACTTCccttt
ttttgccaaaaaaacaacTGAGGAACACCTTTAATTCCTTGTTTGATTTA
AGTGCGTGAGCTATCCTGAATGTTtttgcttgttaatttttttaacctta
aCCTTTTGACTTGAGATGGAAATAACAATAgtgtatattttgaaaattac
tgCGAATATTGTTGCTAAGTTTTGTTAATTAATGTTGATTTAGCTTATTC
CTGCCatagttttttttcagaaatattttttcctctaATTTTCACAAATA
ATGTCTGCTAATTTTATGcttagttaaaaaaaattcaatttttctttgaa
ggtTCACTTTGTTTTTATGTAAAaccttttcttgatttttatgaTTGCCT
CTTTTTCGCTTTTCTGTGCTCAAATACAAGACAGGCTTTTGTTATTTGAG
CTtccttcaaaaaaaagtttttgcttcTACTACAGTACTTTATTTTAGGT
GTCTTCCACCGATATTTTATCCTTACTTTAGACAGTTAGCTTTCATGCCA
ACAACATTATCAGTTTTTAATAgtatttttagggaaaatttaACTATTAT
AATGTAAGCTTTTATGATCTTAGTTTATCGTAAcgcttttattttttatt
tcaatttgtcTAATGTTTCGTTCTTTCCTTCGcattattaacttttttgt
cGAAGGTTTACTGCCCCTTTTTTTGAGTCTCAAAAGTTAGTTCTTGTGGT
AGATTCTGCTTTTTGTTATTAATTGCTACTAAAAGGCTAAAAGTCTTGCC
CTCGACTACAGGCCATCGAGACTTTCTCATCTGTTTTTCCTATGACTTTT
TGCCAGtagatttgtttgttttttttctttttatagaatAGATTTTAGAA
TATTTGGCATTATTAACACAAACCAAAcgatttaaaaagagaaaaattta
attaagTATGTG
Run BLAST on NCBI

protein sequence of TCONS_00027192-protein

>TCONS_00027192-protein ID=TCONS_00027192-protein|Name=TCONS_00027192-protein|organism=Clytia hemisphaerica|type=polypeptide|length=357bp
FMLCDGDPDWLDSIENIPNKLKKLFTLNKLLAHQPWLINVDVLKDFFTGP
AEETWSMSELLHAILVLLHFQTLSGFIFGCGINPEIDSRKGHTKRSPSSG
EYTSGGSEPITPTKIGRVKAGSFVDDSSTQQLFEKMLKVQEEYELSSQDG
EDDGTDDEKLRQFKEVAETNEEHEMEEFDTPQNRFNQYLDDKQFHYKEYA
KREKKDTEVFRAHDYNWQEHCFAFVNRLYPNIGPYLDGKFNCSFDLTYNS
MGGNYTDVDTSKFRLATWNYIHLIYGIFHDDYLYVEVNKLLEKPYKSYIK
KVACFPERITFLDYWEFYSDFLPSEKVHINLLVLESRFQAALLYVSRALM
KHMDNKN
Run BLAST on NCBI

transcript from alignment at sc0000609:1..7349+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027192 ID=TCONS_00027192|Name=TCONS_00027192|organism=Clytia hemisphaerica|type=transcript|length=7349bp|location=Sequence derived from alignment at sc0000609:1..7349+ (Clytia hemisphaerica)
AATTCATGCTTTGTGATGGTGATCCTGATTGGTTAGATTCGATAGAAAAC
ATTCCCAACAAGTTAAAGAAATTGTTCACACTCAACAAACTGTTGGCTCA
TCAACCATGGCTTATCAATGTCGACGTATTAAAGGTTGGATTTATACGAG
TATACTTTTCTCTTTTAGATTTTCATACTTCAAACTATTTCGTTACTAAT
ATTGAGGTTATTGTTGGATAATGGCTTAGTGATTTAAACAACTAAACcaa
ataaaagattttatttctgGATCCCAAGTAATGTAAATGATTTTCATTgt
acaaaaagttttcaaagatGTTGCTAATTTTTCGAAACTGGGATCAATTC
TAAAGAGTGAAGTATAAAACTACttgaaaaattctttgattATACAGGAT
TTTTTTACTGGACCTGCGGAGGAGACGTGGTCAATGTCTGAACTACTTCA
TGCAATCTTGGTGTTACTACACTTCCAAACTTTATCTGGATTCATCTTCG
GGTGTGGCATCAATCCGGAAATCGATTCGCGTAAAGGTAAGGGAATGGAA
AATTCTCCTATTTTTAATCAACTTACTTCTATCGGTAGAGTATTTGAATT
GAGATCACTAAAAAGAACTGTAAGTAAATGAGACTAAAATTTTACCAAAG
CCGATACCTCAGGTTTGAAAATTACTGGTTAAAATGTTAATATTGTCTGG
CAAGTAAATCCTGTAATTTATTGTGTGTAGGTAGTCACGTCACGGACGAG
GTATCTAAGTTGTGAACTGTCTTCAAAGCGAAGGCAGTGATgcaagattt
tcgaaaactaacAAATTTGAAAGATATTATTTGTAGTCGCTATCTTTTTT
agaagcaactccaattttcggttgcttagcattctagctcaatttctgaa
aaaatttgctttgaccacccctgatattatactaTCGTTTTTCATGGTTA
CATTATCCaaaaagcttttattttacgagatagtgaaaaaaATTGGCTAA
TTTCAGGGCTCAAGGTCTAGCAACtttgttgcttataaaaaaaatgtgta
agcTTAAGTGGTCTGTCGGTCAGATCATTCTGACAAGACTTTTAACCTAT
CATATCAACTTAAATACTGTAATTGACTATTTTCGACCTTATTTTGCAGG
TCACACTAAACGTTCTCCATCCTCAGGGGAGTACACGTCGGGCGGTAGTG
AACCCATCACGCCCACAAAAATCGGGCGTGTGAAGGCGGGCAGTTTTGTG
GACGATTCATCTACACAACAATTGTTCGAGAAAATGTTAAAGGTACAAGA
AGAATATGAATTGTCTTCGCAAGATGGCGAGGATGACGGCACCGATGATG
AAAAGTTGAGACAGTTCAAAGAAGTCGCCGAAACAAACGGTTTGTGTTTT
ATATGAACATTTCaaatgagatggagtttttataagatactttaatgatt
ggtcatttgaagtaataaaaatggcgccttctttagaaaaagtaacaaat
ttgttttattactggttaacgaccaaccaaatcaaataagagcttctaaa
aactccatctcgtcctgACCATTTATCaagttgagtctccataactcaaa
cgaGCTAAGGGtattttgagttatggagattgggacgagaaaacttatga
ctatattgtaatttactttctttcaatgaaatgccataaACAATCGCTAA
ATAAACTGCTAGTAGCGATTCAATTTTAAATCCCATGTTTTCAGAACAGC
TGTAGGACCTTTTAGAACAGGGAAGAGCTGTTTTTTCTCTCCAGAGAGAA
GAACTTAATTAGCGATATATCGAATTGCTATATATGAATTgcatagaaaa
aaagaaaatacaaatgACGAGAGAGTTAACAAAATGCACTGGGTTTCAGA
TACTGGAATCGTGTAATATaatccgtgtaatacagtaatatgggtgttac
atgataatacgataattgttatTGGATAATATCAGTTCTTACAAACTATA
ATTTGTCCTTTCCACTactttttgcttattttctacAATGTTAGAATCTA
CTCGTATAGCATGCCAGCCCTTTCACGTCTCAGTTTTTAACGAGCAAGAC
GCGAGGTCTAACATACCGATAGTCTTTCCTTTTTACAAATAACTCAAAAA
CTATTGCGTCGCTTTCGCTTAATTTTGTATAAGATCTTTCCGCTATGATA
TATACAATGCTAAAGAACAATATATCGACAAGTTAACTTTAGCCGTGACC
GAAATTTCATTTAGTTTCCGAATTTCAAAGATTCAAAGCGGCTAGAGCGC
TAGAAATGCTGCAAATCGCGATTTTCCGAACCACCAGCCCTACTGGTGGC
TCGCGATTAAAGGCCCACTTAAACACCCACAGTACAGCTTACAGCGAGAC
GGGAAAGGGCTAGAGTAAtggcatttttgaaaatgtgtttcACTTCCTTT
AGAAGAACACGAAATGGAGGAATTTGATACTCCTCAGAATCGCTTCAACC
AATACCTCGATGACAAGCAATTCCATTACAAAGAATATGCCAAGAGGGAG
AAAAAGGATACTGAAGTGTTCAGAGCACATGTAAGTTGGATgattgactc
aaatttgttctGATTGATGGTGATTTCTTACTGAACTTTATGTGCCGATA
AAATTCAACGTTTTTTCTCAGAGGCCTGCACACTGCTAGATAAACatata
aatttaataaaaaataaacatcaaatttaaatttatgtCTTTAATCTGGC
CCTTTAtcgttaatttgaaatttgtctAACTCTATCTAATCTTATATCAA
AAGTCTCATTTAAAGTACAAGTCTCTATTGGTCTAGTCTCTACTTCTGAT
ACAGTTAAGCCTCTATAGCTCGAACActcacggggaacacaaatttgttt
cgATTTAAGTAGGAAGGCTTGCATGGCACTTCTAACTTAAGGGAGgaaaa
aacttgttcgagtcaAGGAGACATTCGTGCTATGAGATTTCAAAGTTAAA
GAGACTTTACTGTACAAATTATCGCTGTTGATATTTCTTTGTCGTCTACA
GGATTACAACTGGCAAGAACACTGTTTCGCTTTCGTAAATAGACTCTACC
CAAATATTGGACCCTATCTGGATGGAAAGTTCAACTGTTCATTTGACTTG
ACCTACAACAGgtttattttaaatttcatcaattccaattttcaataaat
ctgAAATTGGATTTCTTGTTTGTGAATTTTGGCAAGATTACATTTATTAT
GCAAAAGTTTGAGCCGTTGTAAGCcctctttttggaaatttaaggtTACC
TACACTCGTGCAAAGAGTTTTGAATATTTCATTTACATTCTTTCTCTTTG
TTTAGTATGGGAGGAAACTACACGGATGTTGACACTTCCAAATTTCGATT
GGCTACATGGAATTACATTCACCTTATCTATGGAATTTTTCACGATGACT
ATCTTTATGTCGAGGTAAATGGCGAAGGTTTTAACAAAACGAGGCAGACC
TTTCAAATAATGTTGATCTACCAATTATATATACTTTGTCAAACTTTTCA
AATACATTCAATGTCTTtgaatttgatgtttgattTCTCTATTAACCTTT
GTCGTTCGTTTACGTTGAGGGGGGACATCCTAGGAAGATTCGATTTTCAG
TGAAACCCCCCATACTTTTATTGTACGTTACTTTGCTTTTGTTTTCAGGT
CAACAAATTGTTAGAAAAGCCGTACAAGAGTTATATCAAGAAAGTGGCGT
GTTTTCCTGAACGCATCACATTCCTTGATTACTGGGAGTTTTATTCAGAC
TTTCTACCATCTGAAAAGGTATCATATCATATGATTAGAAAATGCGGACT
Caaattcatttcattgttcaaatgaaatattaattttcttaaaacaaaag
attattGTATTTTCACGATGTCCACAATAAGCTTATCAACTTGAACTGTG
GTGAATAATCCATTCGATATTTATAGCCCATCCTTCTATTTTATTGTGAA
TACAAATGGTTCGAATTTCTTGTGTGGGTTAGCACTCTCTCTGTATACAA
ATGTCTCAAACCTGAGAACATTGATCTGGCTTTAAGTAGCTTCCTNTTGT
GGGTTAGCACTCCTCTGTATACAAATGTCTCAAACCTGAGAACATTGATT
TGGCTTCAAGTAGCCTCCCTTGCTCCTTTGTTAtatgagttttcaaattt
ttcattatttcttgTAGGTTCACATCAACTTGTTAGTGTTAGAGTCAAGA
TTTCAAGCAGCGTTACTGTACGTGTCCAGAGCTTTGATGAAACACATGGA
TAACAAGAACTGACCTTTGGTGAATGTAGTAAGAATGACGAGGTGGTGAA
AAAGAGGTAGTGTAGTTGTTAACTAGTTGTTGGGGATGGATGAGGCGGAT
CGAGATGCTCTGTCTTTCAAAAGAAGCTGGTTTAGTTGCATTGCAATCTC
CATTCTGGTTTTGGTATGTGATCCAGGGTTTTTAAGATCACCTTAACCAA
TTGATAAAAAGAATGGATTTTCATGTTGACTTGGATGGGAACCGAATCAA
ATCGGGTCCCGTATTTCCNGGAATGGATTTTTATGTTGACTTGGATGGGA
ACCGAATCAAATCGGATACCGTATTTCCTCAAATAAGCGCTACGGGGCTC
ATTTAATTTTAGGTGCGACGGAGATGCTTATTTCGAAAATGCGAGTTTCC
AAGTTTCTGAAgtattcactttttttacaaatttgattGATTCGTCGGTT
GATAAAATAAACTTTGGGCTCTATCCGGGGAGTTAGAAACCGAACTTTTA
AGAAAGAATATTAACAGGATTGTGATGTTTTCTCTTTTCttacttaaaaa
aaatgaataaagaaaacaatCTTTAAACTTCAAACTCTAATAAGAGCTGC
ATTTGAATGCTTATTAGACGGAGGGTGGCACTTTATGTAGGAAGTACGGT
ATTCGATATACAATCCGCTAAATTAATGTGGTAATGTGAAAGGTAAGGCT
AGCTAAGACatgaataaaatgttttttttatgtcaTGCATAAACGAGATT
TTATGTATTTaatgataatgaaatctttgaaTGTAGGATGACACCCCGat
cctttttgttttctttaccagtagacaaaaaaatataaattgtgttgtgt
tttttatggctttagaattgtatgaaaaaaaaacttgtatagTTATTCTA
tgatttttatataatatttgtgatttttatgtttctttGTTGTATCGTCA
TAGACGAACTCTAAAATTAGAAACTTTTCAAGATAATTCGAAAGGTTTGA
CTTAATGTAATGACACTAGAGTCAATTTAACATCCGATTCTTGTTTTGAT
TAATAGTTATACGGTCTTCATAGAAAAGGGTCGTGAGAAATGCATGCGAA
ATTTGTCGGTCCCGTATCAGCTGACGAGAGCATGGCTTAAAACTTCGAAA
ATTGGGATCAACCCTCTGTGACGTAACACATCATCGTACCCctctttttt
atgcttttgaTATCACGTGATCGTGTGTATTTGGATTTATTAGTAAGAAt
gagctcttccagaaaatttttggatatattggatattttgtccgggggtt
aGTGAAAAATTTGTAGAATTTGCCTtgtttggggggcaaatttgctCTGC
TCAACTGATGCCTTCTGGGGTAATATCTGTTGTCAGGGGGTCATAATTCA
CTATgtgggtaaatttccaaaaaacgtCATATCCTACACCCCCCTCCccg
atattcattttttttctggaaaagcccaatgtccATTATTTCCTCTCTGC
ACCAATCATCTTACGTGATATGCTTCAATAGATTTATTATTTTAAcccaa
caacaaaaaatataattaaaatgaTTTAATTGCAATTTCTGATACTATGT
ATTATTTTTTacaatctttttttataaaagggttacttttaaacaaagaa
atatttccTTTTAGTGATTTTTATCTCAATTTTCTCTTGGGACCTAACTT
TAACATAGTAATCATTCatttgtttattgtttttgttattgttgttgttt
gttttttttattgtggctttctttttaactttttgagaaacAACCGAACT
CTCTAAAAGTACAGGTACTAGAATGACGTTTTAATCTACATTtggaattt
taaattcttttatttaaggGGGTTGTGAAATGCTTTTCGAGGCACCTGTT
TTCagttattttgttcttatttttcgccattccttgtttgtttgttagtt
ttgttttgttttttttcctctaaaacagaaatttttcatttttattttat
ttacgtAGATTATAAAGAGCAGCCAGTCCAGAATTTTGTGTCGAGTTTTA
TTAAAcaaaaattctgaatttttcTATAAACTTCTTATAAGCATACCTTG
GCTAATTTTTTGGTTTTCGGCCTCAAAACTTCcctttttttgccaaaaaa
acaacTGAGGAACACCTTTAATTCCTTGTTTGATTTAAGTGCGTGAGCTA
TCCTGAATGTTtttgcttgttaatttttttaaccttaaCCTTTTGACTTG
AGATGGAAATAACAATAgtgtatattttgaaaattactgCGAATATTGTT
GCTAAGTTTTGTTAATTAATGTTGATTTAGCTTATTCCTGCCatagtttt
ttttcagaaatattttttcctctaATTTTCACAAATAATGTCTGCTAATT
TTATGcttagttaaaaaaaattcaatttttctttgaaggtTCACTTTGTT
TTTATGTAAAaccttttcttgatttttatgaTTGCCTCTTTTTCGCTTTT
CTGTGCTCAAATACAAGACAGGCTTTTGTTATTTGAGCTtccttcaaaaa
aaagtttttgcttcTACTACAGTACTTTATTTTAGGTGTCTTCCACCGAT
ATTTTATCCTTACTTTAGACAGTTAGCTTTCATGCCAACAACATTATCAG
TTTTTAATAgtatttttagggaaaatttaACTATTATAATGTAAGCTTTT
ATGATCTTAGTTTATCGTAAcgcttttattttttatttcaatttgtcTAA
TGTTTCGTTCTTTCCTTCGcattattaacttttttgtcGAAGGTTTACTG
CCCCTTTTTTTGAGTCTCAAAAGTTAGTTCTTGTGGTAGATTCTGCTTTT
TGTTATTAATTGCTACTAAAAGGCTAAAAGTCTTGCCCTCGACTACAGGC
CATCGAGACTTTCTCATCTGTTTTTCCTATGACTTTTTGCCAGtagattt
gtttgttttttttctttttatagaatAGATTTTAGAATATTTGGCATTAT
TAACACAAACCAAAcgatttaaaaagagaaaaatttaattaagTATGTG

Coding sequence (CDS) from alignment at sc0000609:1..7349+

>TCONS_00027192 ID=TCONS_00027192|Name=TCONS_00027192|organism=Clytia hemisphaerica|type=CDS|length=8592bp|location=Sequence derived from alignment at sc0000609:1..7349+ (Clytia hemisphaerica)
TTCATGCTTTGTGATGGTGATCCTGATTGGTTAGATTCGATAGAAAACAT
TCCCAACAAGTTAAAGAAATTGTTCACACTCAACAAACTGTTGGCTCATC
AACCATGGCTTATCAATGTCGACGTATTAAAGGATTTTTTTACTGGACCT
GCGGAGGAGACGTGGTCAATGTCTGAACTACTTCATGCAATCTTGGTGTT
ACTACACTTCCAAACTTTATCTGGATTCATCTTCGGGTGTGGCATCAATC
CGGAAATCGATTCGCGTAAAGGTCACACTAAACGTTCTCCATCCTCAGGG
GAGTACACGTCGGGCGGTAGTGAACCCATCACGCCCACAAAAATCGGGCG
TGTGAAGGCGGGCAGTTTTGTGGACGATTCATCTACACAACAATTGTTCG
AGAAAATGTTAAAGGTACAAGAAGAATATGAATTGTCTTCGCAAGATGGC
GAGGATGACGGCACCGATGATGAAAAGTTGAGACAGTTCAAAGAAGTCGC
CGAAACAAACGAAGAACACGAAATGGAGGAATTTGATACTCCTCAGAATC
GCTTCAACCAATACCTCGATGACAAGCAATTCCATTACAAAGAATATGCC
AAGAGGGAGAAAAAGGATACTGAAGTGTTCAGAGCACATGATTACAACTG
GCAAGAACACTGTTTCGCTTTCGTAAATAGACTCTACCCAAATATTGGAC
CCTATCTGGATGGAAAGTTCAACTGTTCATTTGACTTGACCTACAACAGT
ATGGGAGGAAACTACACGGATGTTGACACTTCCAAATTTCGATTGGCTAC
ATGGAATTACATTCACCTTATCTATGGAATTTTTCACGATGACTATCTTT
ATGTCGAGGTCAACAAATTGTTAGAAAAGCCGTACAAGAGTTATATCAAG
AAAGTGGCGTGTTTTCCTGAACGCATCACATTCCTTGATTACTGGGAGTT
TTATTCAGACTTTCTACCATCTGAAAAGGTTCACATCAACTTGTTAGTGT
TAGAGTCAAGATTTCAAGCAGCGTTACTGTACGTGTCCAGAGCTTTGATG
AAACACATGGATAACAAGAACTGATTCATGCTTTGTGATGGTGATCCTGA
TTGGTTAGATTCGATAGAAAACATTCCCAACAAGTTAAAGAAATTGTTCA
CACTCAACAAACTGTTGGCTCATCAACCATGGCTTATCAATGTCGACGTA
TTAAAGGATTTTTTTACTGGACCTGCGGAGGAGACGTGGTCAATGTCTGA
ACTACTTCATGCAATCTTGGTGTTACTACACTTCCAAACTTTATCTGGAT
TCATCTTCGGGTGTGGCATCAATCCGGAAATCGATTCGCGTAAAGGTCAC
ACTAAACGTTCTCCATCCTCAGGGGAGTACACGTCGGGCGGTAGTGAACC
CATCACGCCCACAAAAATCGGGCGTGTGAAGGCGGGCAGTTTTGTGGACG
ATTCATCTACACAACAATTGTTCGAGAAAATGTTAAAGGTACAAGAAGAA
TATGAATTGTCTTCGCAAGATGGCGAGGATGACGGCACCGATGATGAAAA
GTTGAGACAGTTCAAAGAAGTCGCCGAAACAAACGAAGAACACGAAATGG
AGGAATTTGATACTCCTCAGAATCGCTTCAACCAATACCTCGATGACAAG
CAATTCCATTACAAAGAATATGCCAAGAGGGAGAAAAAGGATACTGAAGT
GTTCAGAGCACATGATTACAACTGGCAAGAACACTGTTTCGCTTTCGTAA
ATAGACTCTACCCAAATATTGGACCCTATCTGGATGGAAAGTTCAACTGT
TCATTTGACTTGACCTACAACAGTATGGGAGGAAACTACACGGATGTTGA
CACTTCCAAATTTCGATTGGCTACATGGAATTACATTCACCTTATCTATG
GAATTTTTCACGATGACTATCTTTATGTCGAGGTCAACAAATTGTTAGAA
AAGCCGTACAAGAGTTATATCAAGAAAGTGGCGTGTTTTCCTGAACGCAT
CACATTCCTTGATTACTGGGAGTTTTATTCAGACTTTCTACCATCTGAAA
AGGTTCACATCAACTTGTTAGTGTTAGAGTCAAGATTTCAAGCAGCGTTA
CTGTACGTGTCCAGAGCTTTGATGAAACACATGGATAACAAGAACTGATT
CATGCTTTGTGATGGTGATCCTGATTGGTTAGATTCGATAGAAAACATTC
CCAACAAGTTAAAGAAATTGTTCACACTCAACAAACTGTTGGCTCATCAA
CCATGGCTTATCAATGTCGACGTATTAAAGGATTTTTTTACTGGACCTGC
GGAGGAGACGTGGTCAATGTCTGAACTACTTCATGCAATCTTGGTGTTAC
TACACTTCCAAACTTTATCTGGATTCATCTTCGGGTGTGGCATCAATCCG
GAAATCGATTCGCGTAAAGGTCACACTAAACGTTCTCCATCCTCAGGGGA
GTACACGTCGGGCGGTAGTGAACCCATCACGCCCACAAAAATCGGGCGTG
TGAAGGCGGGCAGTTTTGTGGACGATTCATCTACACAACAATTGTTCGAG
AAAATGTTAAAGGTACAAGAAGAATATGAATTGTCTTCGCAAGATGGCGA
GGATGACGGCACCGATGATGAAAAGTTGAGACAGTTCAAAGAAGTCGCCG
AAACAAACGAAGAACACGAAATGGAGGAATTTGATACTCCTCAGAATCGC
TTCAACCAATACCTCGATGACAAGCAATTCCATTACAAAGAATATGCCAA
GAGGGAGAAAAAGGATACTGAAGTGTTCAGAGCACATGATTACAACTGGC
AAGAACACTGTTTCGCTTTCGTAAATAGACTCTACCCAAATATTGGACCC
TATCTGGATGGAAAGTTCAACTGTTCATTTGACTTGACCTACAACAGTAT
GGGAGGAAACTACACGGATGTTGACACTTCCAAATTTCGATTGGCTACAT
GGAATTACATTCACCTTATCTATGGAATTTTTCACGATGACTATCTTTAT
GTCGAGGTCAACAAATTGTTAGAAAAGCCGTACAAGAGTTATATCAAGAA
AGTGGCGTGTTTTCCTGAACGCATCACATTCCTTGATTACTGGGAGTTTT
ATTCAGACTTTCTACCATCTGAAAAGGTTCACATCAACTTGTTAGTGTTA
GAGTCAAGATTTCAAGCAGCGTTACTGTACGTGTCCAGAGCTTTGATGAA
ACACATGGATAACAAGAACTGATTCATGCTTTGTGATGGTGATCCTGATT
GGTTAGATTCGATAGAAAACATTCCCAACAAGTTAAAGAAATTGTTCACA
CTCAACAAACTGTTGGCTCATCAACCATGGCTTATCAATGTCGACGTATT
AAAGGATTTTTTTACTGGACCTGCGGAGGAGACGTGGTCAATGTCTGAAC
TACTTCATGCAATCTTGGTGTTACTACACTTCCAAACTTTATCTGGATTC
ATCTTCGGGTGTGGCATCAATCCGGAAATCGATTCGCGTAAAGGTCACAC
TAAACGTTCTCCATCCTCAGGGGAGTACACGTCGGGCGGTAGTGAACCCA
TCACGCCCACAAAAATCGGGCGTGTGAAGGCGGGCAGTTTTGTGGACGAT
TCATCTACACAACAATTGTTCGAGAAAATGTTAAAGGTACAAGAAGAATA
TGAATTGTCTTCGCAAGATGGCGAGGATGACGGCACCGATGATGAAAAGT
TGAGACAGTTCAAAGAAGTCGCCGAAACAAACGAAGAACACGAAATGGAG
GAATTTGATACTCCTCAGAATCGCTTCAACCAATACCTCGATGACAAGCA
ATTCCATTACAAAGAATATGCCAAGAGGGAGAAAAAGGATACTGAAGTGT
TCAGAGCACATGATTACAACTGGCAAGAACACTGTTTCGCTTTCGTAAAT
AGACTCTACCCAAATATTGGACCCTATCTGGATGGAAAGTTCAACTGTTC
ATTTGACTTGACCTACAACAGTATGGGAGGAAACTACACGGATGTTGACA
CTTCCAAATTTCGATTGGCTACATGGAATTACATTCACCTTATCTATGGA
ATTTTTCACGATGACTATCTTTATGTCGAGGTCAACAAATTGTTAGAAAA
GCCGTACAAGAGTTATATCAAGAAAGTGGCGTGTTTTCCTGAACGCATCA
CATTCCTTGATTACTGGGAGTTTTATTCAGACTTTCTACCATCTGAAAAG
GTTCACATCAACTTGTTAGTGTTAGAGTCAAGATTTCAAGCAGCGTTACT
GTACGTGTCCAGAGCTTTGATGAAACACATGGATAACAAGAACTGATTCA
TGCTTTGTGATGGTGATCCTGATTGGTTAGATTCGATAGAAAACATTCCC
AACAAGTTAAAGAAATTGTTCACACTCAACAAACTGTTGGCTCATCAACC
ATGGCTTATCAATGTCGACGTATTAAAGGATTTTTTTACTGGACCTGCGG
AGGAGACGTGGTCAATGTCTGAACTACTTCATGCAATCTTGGTGTTACTA
CACTTCCAAACTTTATCTGGATTCATCTTCGGGTGTGGCATCAATCCGGA
AATCGATTCGCGTAAAGGTCACACTAAACGTTCTCCATCCTCAGGGGAGT
ACACGTCGGGCGGTAGTGAACCCATCACGCCCACAAAAATCGGGCGTGTG
AAGGCGGGCAGTTTTGTGGACGATTCATCTACACAACAATTGTTCGAGAA
AATGTTAAAGGTACAAGAAGAATATGAATTGTCTTCGCAAGATGGCGAGG
ATGACGGCACCGATGATGAAAAGTTGAGACAGTTCAAAGAAGTCGCCGAA
ACAAACGAAGAACACGAAATGGAGGAATTTGATACTCCTCAGAATCGCTT
CAACCAATACCTCGATGACAAGCAATTCCATTACAAAGAATATGCCAAGA
GGGAGAAAAAGGATACTGAAGTGTTCAGAGCACATGATTACAACTGGCAA
GAACACTGTTTCGCTTTCGTAAATAGACTCTACCCAAATATTGGACCCTA
TCTGGATGGAAAGTTCAACTGTTCATTTGACTTGACCTACAACAGTATGG
GAGGAAACTACACGGATGTTGACACTTCCAAATTTCGATTGGCTACATGG
AATTACATTCACCTTATCTATGGAATTTTTCACGATGACTATCTTTATGT
CGAGGTCAACAAATTGTTAGAAAAGCCGTACAAGAGTTATATCAAGAAAG
TGGCGTGTTTTCCTGAACGCATCACATTCCTTGATTACTGGGAGTTTTAT
TCAGACTTTCTACCATCTGAAAAGGTTCACATCAACTTGTTAGTGTTAGA
GTCAAGATTTCAAGCAGCGTTACTGTACGTGTCCAGAGCTTTGATGAAAC
ACATGGATAACAAGAACTGATTCATGCTTTGTGATGGTGATCCTGATTGG
TTAGATTCGATAGAAAACATTCCCAACAAGTTAAAGAAATTGTTCACACT
CAACAAACTGTTGGCTCATCAACCATGGCTTATCAATGTCGACGTATTAA
AGGATTTTTTTACTGGACCTGCGGAGGAGACGTGGTCAATGTCTGAACTA
CTTCATGCAATCTTGGTGTTACTACACTTCCAAACTTTATCTGGATTCAT
CTTCGGGTGTGGCATCAATCCGGAAATCGATTCGCGTAAAGGTCACACTA
AACGTTCTCCATCCTCAGGGGAGTACACGTCGGGCGGTAGTGAACCCATC
ACGCCCACAAAAATCGGGCGTGTGAAGGCGGGCAGTTTTGTGGACGATTC
ATCTACACAACAATTGTTCGAGAAAATGTTAAAGGTACAAGAAGAATATG
AATTGTCTTCGCAAGATGGCGAGGATGACGGCACCGATGATGAAAAGTTG
AGACAGTTCAAAGAAGTCGCCGAAACAAACGAAGAACACGAAATGGAGGA
ATTTGATACTCCTCAGAATCGCTTCAACCAATACCTCGATGACAAGCAAT
TCCATTACAAAGAATATGCCAAGAGGGAGAAAAAGGATACTGAAGTGTTC
AGAGCACATGATTACAACTGGCAAGAACACTGTTTCGCTTTCGTAAATAG
ACTCTACCCAAATATTGGACCCTATCTGGATGGAAAGTTCAACTGTTCAT
TTGACTTGACCTACAACAGTATGGGAGGAAACTACACGGATGTTGACACT
TCCAAATTTCGATTGGCTACATGGAATTACATTCACCTTATCTATGGAAT
TTTTCACGATGACTATCTTTATGTCGAGGTCAACAAATTGTTAGAAAAGC
CGTACAAGAGTTATATCAAGAAAGTGGCGTGTTTTCCTGAACGCATCACA
TTCCTTGATTACTGGGAGTTTTATTCAGACTTTCTACCATCTGAAAAGGT
TCACATCAACTTGTTAGTGTTAGAGTCAAGATTTCAAGCAGCGTTACTGT
ACGTGTCCAGAGCTTTGATGAAACACATGGATAACAAGAACTGATTCATG
CTTTGTGATGGTGATCCTGATTGGTTAGATTCGATAGAAAACATTCCCAA
CAAGTTAAAGAAATTGTTCACACTCAACAAACTGTTGGCTCATCAACCAT
GGCTTATCAATGTCGACGTATTAAAGGATTTTTTTACTGGACCTGCGGAG
GAGACGTGGTCAATGTCTGAACTACTTCATGCAATCTTGGTGTTACTACA
CTTCCAAACTTTATCTGGATTCATCTTCGGGTGTGGCATCAATCCGGAAA
TCGATTCGCGTAAAGGTCACACTAAACGTTCTCCATCCTCAGGGGAGTAC
ACGTCGGGCGGTAGTGAACCCATCACGCCCACAAAAATCGGGCGTGTGAA
GGCGGGCAGTTTTGTGGACGATTCATCTACACAACAATTGTTCGAGAAAA
TGTTAAAGGTACAAGAAGAATATGAATTGTCTTCGCAAGATGGCGAGGAT
GACGGCACCGATGATGAAAAGTTGAGACAGTTCAAAGAAGTCGCCGAAAC
AAACGAAGAACACGAAATGGAGGAATTTGATACTCCTCAGAATCGCTTCA
ACCAATACCTCGATGACAAGCAATTCCATTACAAAGAATATGCCAAGAGG
GAGAAAAAGGATACTGAAGTGTTCAGAGCACATGATTACAACTGGCAAGA
ACACTGTTTCGCTTTCGTAAATAGACTCTACCCAAATATTGGACCCTATC
TGGATGGAAAGTTCAACTGTTCATTTGACTTGACCTACAACAGTATGGGA
GGAAACTACACGGATGTTGACACTTCCAAATTTCGATTGGCTACATGGAA
TTACATTCACCTTATCTATGGAATTTTTCACGATGACTATCTTTATGTCG
AGGTCAACAAATTGTTAGAAAAGCCGTACAAGAGTTATATCAAGAAAGTG
GCGTGTTTTCCTGAACGCATCACATTCCTTGATTACTGGGAGTTTTATTC
AGACTTTCTACCATCTGAAAAGGTTCACATCAACTTGTTAGTGTTAGAGT
CAAGATTTCAAGCAGCGTTACTGTACGTGTCCAGAGCTTTGATGAAACAC
ATGGATAACAAGAACTGATTCATGCTTTGTGATGGTGATCCTGATTGGTT
AGATTCGATAGAAAACATTCCCAACAAGTTAAAGAAATTGTTCACACTCA
ACAAACTGTTGGCTCATCAACCATGGCTTATCAATGTCGACGTATTAAAG
GATTTTTTTACTGGACCTGCGGAGGAGACGTGGTCAATGTCTGAACTACT
TCATGCAATCTTGGTGTTACTACACTTCCAAACTTTATCTGGATTCATCT
TCGGGTGTGGCATCAATCCGGAAATCGATTCGCGTAAAGGTCACACTAAA
CGTTCTCCATCCTCAGGGGAGTACACGTCGGGCGGTAGTGAACCCATCAC
GCCCACAAAAATCGGGCGTGTGAAGGCGGGCAGTTTTGTGGACGATTCAT
CTACACAACAATTGTTCGAGAAAATGTTAAAGGTACAAGAAGAATATGAA
TTGTCTTCGCAAGATGGCGAGGATGACGGCACCGATGATGAAAAGTTGAG
ACAGTTCAAAGAAGTCGCCGAAACAAACGAAGAACACGAAATGGAGGAAT
TTGATACTCCTCAGAATCGCTTCAACCAATACCTCGATGACAAGCAATTC
CATTACAAAGAATATGCCAAGAGGGAGAAAAAGGATACTGAAGTGTTCAG
AGCACATGATTACAACTGGCAAGAACACTGTTTCGCTTTCGTAAATAGAC
TCTACCCAAATATTGGACCCTATCTGGATGGAAAGTTCAACTGTTCATTT
GACTTGACCTACAACAGTATGGGAGGAAACTACACGGATGTTGACACTTC
CAAATTTCGATTGGCTACATGGAATTACATTCACCTTATCTATGGAATTT
TTCACGATGACTATCTTTATGTCGAGGTCAACAAATTGTTAGAAAAGCCG
TACAAGAGTTATATCAAGAAAGTGGCGTGTTTTCCTGAACGCATCACATT
CCTTGATTACTGGGAGTTTTATTCAGACTTTCTACCATCTGAAAAGGTTC
ACATCAACTTGTTAGTGTTAGAGTCAAGATTTCAAGCAGCGTTACTGTAC
GTGTCCAGAGCTTTGATGAAACACATGGATAACAAGAACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015292XLOC_015292Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027192-exon-sc0000609-1491911889:1..134TCONS_00027192-exon-sc0000609-1491911889:1..134Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1510915933:1..134TCONS_00027192-exon-sc0000609-1510915933:1..134Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1575043694:1..134TCONS_00027192-exon-sc0000609-1575043694:1..134Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1491911889:398..536TCONS_00027192-exon-sc0000609-1491911889:398..536Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1510915933:398..536TCONS_00027192-exon-sc0000609-1510915933:398..536Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1575043694:398..536TCONS_00027192-exon-sc0000609-1575043694:398..536Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1491911889:1150..1389TCONS_00027192-exon-sc0000609-1491911889:1150..1389Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1510915933:1150..1389TCONS_00027192-exon-sc0000609-1510915933:1150..1389Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1575043694:1150..1389TCONS_00027192-exon-sc0000609-1575043694:1150..1389Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1491911889:2453..2580TCONS_00027192-exon-sc0000609-1491911889:2453..2580Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1510915933:2453..2580TCONS_00027192-exon-sc0000609-1510915933:2453..2580Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1575043694:2453..2580TCONS_00027192-exon-sc0000609-1575043694:2453..2580Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1491911889:3052..3161TCONS_00027192-exon-sc0000609-1491911889:3052..3161Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1510915933:3052..3161TCONS_00027192-exon-sc0000609-1510915933:3052..3161Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1575043694:3052..3161TCONS_00027192-exon-sc0000609-1575043694:3052..3161Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1491911889:3356..3464TCONS_00027192-exon-sc0000609-1491911889:3356..3464Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1510915933:3356..3464TCONS_00027192-exon-sc0000609-1510915933:3356..3464Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1575043694:3356..3464TCONS_00027192-exon-sc0000609-1575043694:3356..3464Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1491911889:3699..3818TCONS_00027192-exon-sc0000609-1491911889:3699..3818Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1510915933:3699..3818TCONS_00027192-exon-sc0000609-1510915933:3699..3818Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1575043694:3699..3818TCONS_00027192-exon-sc0000609-1575043694:3699..3818Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1491911889:4218..7349TCONS_00027192-exon-sc0000609-1491911889:4218..7349Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1510915933:4218..7349TCONS_00027192-exon-sc0000609-1510915933:4218..7349Clytia hemisphaericaexon
TCONS_00027192-exon-sc0000609-1575043694:4218..7349TCONS_00027192-exon-sc0000609-1575043694:4218..7349Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027192-proteinTCONS_00027192-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000609supercontigsc0000609:1..7349 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.649457	0.39604	1.15461	0.9366	6.29171	4.63076	6.69652	7.38284	6.02327	5.63463	6.24135	6.7016	6.129	6.01472	4.29755	3.72583	3.2021	3.11416	3.73591	4.42214	4.64783	5.27379	3.96401	4.73235	5.52027	6.50396	2.69488	3.41568	2.60286	2.41262
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR029032AhpD-like
IPR023378YheA/YmcA-like_dom
IPR006730Sestrin
Vocabulary: Biological Process
TermDefinition
GO:1901031regulation of response to reactive oxygen species
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:1901031 regulation of response to reactive oxygen species
cellular_component GO:0005634 nucleus
Blast
[Close]
BLAST of TCONS_00027192 vs. Swiss-Prot (Human)
Match: SESN1 (Sestrin-1 OS=Homo sapiens GN=SESN1 PE=1 SV=2)

HSP 1 Score: 253.832 bits (647), Expect = 8.491e-73
Identity = 145/361 (40.17%), Postives = 218/361 (60.39%), Query Frame = 3 
Query:    3 FMLCDGDPDWLDSIENIPXXXXXXXXXXXXXAHQPWLINVDVLKDFFTGPAEETWSMSELLHAILVLLHFQTLSGFIFGCGINPEIDSRKGHTKRSPSSGEYT----SGGSEPITPTKIGRVKAGSFVDDS--STQQLFEKMLKVQE--EYELSSQDGEDDGTDDEKLRQFKEVAETNEEHEMEEFDTPQNRFNQYLDDKQFHYKEYAKREKKDTEVFRAHDYNWQEHCFAFVNRLYPNIGPYLDGKFNCSFDLTYNSMGGNYTDVDTSKFRLATWNYIHLIYGIFHDDYLYVEVNKLLEKPYKSYIKKVACFPERITFLDYWEFYSDFLPSEKVHINLLVLESRFQAALLYVSRALMKHM 1061
            F+   GDP WL+ +EN P KL+ L  LNK+LAH+PWLI  + ++       E +WS++EL+HA+++L H+ +L+ F FGCGI+PEI    GHT R PS   Y     + G+  +    +   +  S V DS    + L EKM ++QE  + E +SQ+      + EK       +  +EE       TP    +++ +D  + YK+++ R       FR  DY W++H ++ VNRLYP++G  +D KF+ +++LTYN+M   + DVDTS  R A WNYIH ++GI +DDY Y E+N+LL++ +K YIK V C PE++T   Y  F+  F  SEKVH+NLL++E+R QA LLY  RA+ ++M
Sbjct:  141 FLHVGGDPKWLNGLENAPQKLQNLGELNKVLAHRPWLITKEHIEGLLKA-EEHSWSLAELVHAVVLLTHYHSLASFTFGCGISPEIHCDGGHTFRPPSVSNYCICDITNGNHSVDEMPVNSAENVS-VSDSFFEVEALMEKMRQLQECRDEEEASQEEMASRFEIEKRESMFVFSSDDEE------VTPARAVSRHFEDTSYGYKDFS-RHGMHVPTFRVQDYCWEDHGYSLVNRLYPDVGQLIDEKFHIAYNLTYNTMA-MHKDVDTSMLRRAIWNYIHCMFGIRYDDYDYGEINQLLDRSFKVYIKTVVCTPEKVTKRMYDSFWRQFKHSEKVHVNLLLIEARMQAELLYALRAITRYM 491
The following BLAST results are available for this feature:
BLAST of TCONS_00027192 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
SESN18.491e-7340.17Sestrin-1 OS=Homo sapiens GN=SESN1 PE=1 SV=2[more]
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