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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027196 ID=TCONS_00027196|Name=TCONS_00027196|organism=Clytia hemisphaerica|type=transcript|length=2219bp
tgatattttcccACCGCCAACAATTACGCATCTTTGATGGGAGACATGCT
GTCTGATGCATTCAGTTGTATCGGTTTCTCGTGGATCGCTTCTCCTGCTT
GCACTGAACTAGAAATGATCACTATGGATTGGTTGACTAAAAGTCTTGGA
ATGCCAGAAGCCTTTCACCATTCAgGTCCAGGTCAAGGAGGTGGTGTCAT
ACAAGGAAGTATGAGCGAAACTATACTCATTGCCATGCTAGCTGCCAAAC
ATCGTATGCTTGAAAAACATAACTTGAACCAAGTTGACGCTGCTTCAAAA
CTTGTTGCGTATGGATCAAAACAAGCGCACTCGTCGTTGGAAAAGGGAGC
TCGGATTGCAGGTACACAACTTCGACTTTTAGATATGGATGGCAAACACA
GCATGCGTGGGGAGGTTTTGGAAAGTGCAATCAAAGAAGATAAGGCTAAA
GGTTTGATGCCATATTTTGTTTGCGCCACTTTGGGTACCACAAGTTTATG
TTCATTTGATGCGATTGATGAAATCAGTGCAGTGGCAAAACAAGAAGGGT
TGTGGGTGAATGTAGATGCGGCTTATGCTGGCGCCGCTCTGATTTGTCCG
GAGTATAGATACCTCATCACAAATTGGAATGGAATTGATTCTTTCGCTTT
GAGTTGCAATAAATGGCTTATGGTCACGGCTGATTGCGCCGTCATGTTTG
TTCGAGATTCACTGGATTTACTAAAGACCTTTAATGTTGATCCACTGTAT
TTAAAACATCAGTATCAAAAAGAAGCAGTTGATTTCCGACATTGGCAAAT
ACCTTTGTGTCGGCGTTTTCGATCTTTGAAATTATGGATGGTATTTAAAT
GTTACGGGGTTGCTGGCCTTCAGCATAACATACGTAAACAGACGCAGCAA
GCTAAAATGTTTGAGAATTTAGTTAAAAGTGATTCTAGATTTGAGGTTGT
AAATGATGTCAAGATGGGTCTCGTTTGTTTTCGATTGATTGGCGATAACA
GCCTTAGCGAAGAGTTGAACAATCGAGTCAACGAGGCAAGAAAAATTCAC
ATGTCACCTGCTAagaccgaaaaaaaatattttttgcgtttGGTTGTTTG
TTCGCGATGGACAGTGGACGAAGATCTTGAATTTGCTTGGAACGAGATAC
AACATCATGCTAATGAAATTTTAATGgaacaaaaatgaataaacctTCCA
GGATTTATAGAGGTCTGTGACGAAGAACTGAATCATAGATATCGAACAAA
AGTAGCTTCCTAAATGGGAATCTAGAAGGCCCTGCAAGTAAATCTTTTTT
GTGGGTTTTAAGATACAAAGTGTGTAATGGGTATGAATTAGAGGCAGAAT
ACAATTTTAGTAATTATAATTTTCTAATCCCATCGAAGAGAGTCTACGTA
ATGTTCTAGTTGGTGaattggggagttgctagtttcgagttggaaAGTTG
GTAAAACTTAAAggcgaccgaaaattttctaatttaaactaatgtagccc
aaaagtacaagGGAGCTAAATAATGGGTAgatgttatatcggatggccaa
agtcactttttttaatttcctatctcttatcctatttttctcttttctga
ctgtctgagagtttgtttttcattttctaactATCTatgttttctaagtt
ttgatcTGTCAATCATATTTCGTCCAATCAAATAGGGTACGAACCCTCGC
CAAATAAAGACCTTCGGTTCCGGAAGCCAGCACTCTATCCACTGAGCCAT
CGTCGCATGCTAGATTCTGCAATTTGAAAGAACTTATATTCGAACGGACA
AATCTCTTTATATATATGAaactcccaaccctaccggtgctcctacaagg
atcccttcgggatcctaagttaagtGACTGGGTACGAGTGCCCCTATGAG
GACCTCCGGTCCtttattgtgactctcgagctccaaccctgaccctaact
gatgataaccgaacccccgtcttcCAGGGTGACTTTTATCGATGCGCGGA
TGAGAAAATAAATAAGGTGACTTTTGAGATAGATGCAACGTATCATTGGT
CTTTATATATTATCCTTTTTATCTAATACATACTATACTTTTtatctatg
tatctaaatatctatgtatccattatctatatatctatatatccatgtat
ctatatatccatgcatctatatatctatgtatccatgtatctatatatct
atgtatccatgtatctata Run BLAST on NCBI transcript from alignment at sc0000609:35312..46293+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027196 ID=TCONS_00027196|Name=TCONS_00027196|organism=Clytia hemisphaerica|type=transcript|length=10982bp|location=Sequence derived from alignment at sc0000609:35312..46293+ (Clytia hemisphaerica)
tgatattttcccACCGCCAACAATTACGCATCTTTGATGGGAGACATGCT
GTCTGATGCATTCAGTTGTATCGGTTTCTCGTGGATCGCTTCTCCTGCTT
GCACTGAACTAGAAATGATCACTATGGATTGGTTGACTAAAAGTCTTGGA
ATGCCAGAAGCCTTTCACCATTCAggtattttgatttgttttaagCCAAT
TCTAAAAATACATGCCCTTTTCTATGTAGGTCTTTTCCACTTTGCATTTT
TGGAGCCTATTGTTTTGGGCTCCAaaggctccaaacattcgattttttta
ctTCTTGATGTCACTTTAGGCTTTAGAAGCTCTTGAAGTAGCGAAAAATT
GGAAACACTTGAAAGTTTTTCCCCCAAAAAATTCAAGTGTTAACCAGTTT
TTGGTGCTCACTAGCTAGTAACAATGTCCTTTTTCCAAAGGTCCAGGTCA
AGGAGGTGGTGTCATCCAAGGAAGTATGAGTGAAACTATACTCATTGCCA
TGCTAGCTGCCAAACAACGTATAGTTGAAAAACATAACTTGAACCAAGTT
GACTCTGTCTCAAAACTTATTGCGTATGGATCAAAACAGGTGCACTCGTC
GTTGGAAAAGGGAGCTCGGATTGCAGGTACACAACTTCGACTTTTAGGGG
GGTGTACGGGATATCGGTACATCGGCATTGGCCTTTTTTTAtatcggtaa
atcggtattagaGGAAAAAATTGATCGGTAATCGGTATTTTAAGACCATC
TCGGTATCGGTAACAGACCCTTTTTTAtatcggtaaatcggtattagaGG
AAAAAATTGATCGGTAATCGGTATTTTAAGACCATCTCGGTATCGGTAAC
AGACCCTTTTTTAtatcggtatttcggtatttttggTCAACTATCGGTAT
CGACCCCCTCCTTGGTATCGAAGATCATGAGCCATTGCGCTCCAAAACCA
ATTTTGGtggaataaattttaaaatcttgcaattttttaaacaaaatatc
ttaatttttttgctcgcttcgctcgcactagCCTCTTAGAATTATTCTTG
ATCAGTATAAAATTCTCATCGCTTTTTTAGGGTTTATGCTATATGGTTGC
GGatgactttcaaaaattttccatattGCCAAAGCCTCCTTTTCCATGTG
AATATATGAACGATATGTTCTAAGCACTCATATGTAAATTAGTACAAATT
AAGGAACACTCGGGGACGCCAATTTTAAGAATCATGGCTGCAATTTTGAT
AAGGCAAGAGTCTCAGCAAGGGGTCTGCTTGATACATTTTCCTGCcgtga
atacagttgacgctctctaaacgATCCATTTTGGCGTTTTTGCAGGGGGC
CACGCCTCCCCAAGTGGAGTTTTGAACGCCGAACTCTTAAAATTACCCTA
AAATGCGCTTTAAATTGCGCCCAAAGACcagaaataacttgaaaaatcat
gaaattttttttggtcccTTCGCTCGCAATTAAGTTATAAGACGATTTTT
GAAGGGAGATCTAACTGCACCCCACGACCAATTTGgtgaaaataatattc
aaaacaaaaactcacaatttttttcttgcttcATTCGCACGCACTAGCtt
ccttcaattttttgatcTAGAGATCTAGAGAGTATTAAATTTATATCTTT
ATCCGTTACtttctactattcgacattctatcACTCGATAAGCTCCCATT
TTCGATGAAAGTTCGAGGTTCCTTGATGGTTTTCCGTtctcttattcaat
ttttagcatCTTGCTAAACTTTTGGTTAAATTTAAGCtctgttttggaaa
aaattttggctCGCGTCAAACAGAGTTAACTTTTCCCACTGACTAATAGA
GAAGCATGACCATGGTTgtgttttttgttctttttttgtcaaaactttTG
TTCAATGTTATTATACTGTAATTGGCTTTACTCAAACCATCTCGATGAGC
AATGTCACAattttttcttgctcgctttcctcgcatttcctaaatgtttc
taaaatgacctgaattttaacttcaattTTTGGTATACGAATGCAACCAA
AAAATGGGCGCCAGAATAAGCGTACAAGGCGCCTTAagccaaaattctac
ttttgcctGCCCCCTTGAtctacccaccacgctactgtttgGTAATCGTC
ATAGAGACTTTGGATGATGACAAACCCAACCTTTATCGTCCACACATACC
GAGCACCCATATTTGActaagtaccccctccgggagataagtacctgaaa
aattgggaaaaattgatcggtatcggtattacgaaggcccgtacgccccc
caccttTTAGATATTGATGGCAAACACAGCATGCGTGGGGAGGTTTTGGA
AAGTGCAATCAAAGAAGATAAGGCTAAAGGTTTGATGCCATATTTTGTAT
GCGCGACTTTGGGTACCACAAGTTTATGTTCATTTGATGCGATTGATGAA
ATCAGTGCAGTGGCAAAACAAGAAGGATTGTGGGTGAATGTAGATGCGGC
TTATGCTGGCGCCGCTCTGATTTATCCGGAGTATAGATACCTCATCACAA
ATTGGAATGGAATTGATTCTTTCGCTTTGAGTTGCAATAAATGGCTTGCG
ATTTGCGATTGTGCCGCCCTGTTTGTTCGAGATTCACTGGATTTACTCGA
GACCTTTAATGTCGATCCACTGTATTTAAAACATCAGTATAAAAAAGAAG
CAGTTGATTTCCGAAATTGGCAAATACCTTTGTGCAGGCGTTTTCGATCT
TTGAAATTATGGATGGTATTGTCAGCTGGAATTTAAAGCCAGCTGGCCAC
CCAATCAGAAAATGGTTCGATTAAACCCCCGCAAACTAACAAGGCAACAA
ACATATAAATGAGCTACACACAGCCCAAGACCAATATCTCATAACGATCG
ACAGTTAAACTACGCAAATGCTGAAACGGGCGGAAAATAATAATTGAACG
AGTTAACCGACGAGCAGATTGGTCGTAATGGATGGTTGCTTTTATGAACT
TTTGCAAGACAATATAATACAAACGTCTTTGTAGAACTTATTcgtaattt
tcttttcatttaacaGTTTCAGAAGACAACGAATCAGCTCTTCTTCGCGT
TTGATAGTTGGATCTTTATCAAAAGGCTTGAATTTGGTTTTATCTGCTAA
CAAAGTCTCTAGTTCAATGACATCGTCAGATTTCCGTAACAAAACAACGC
TCTTCCCTTTATCAGCTTTTGCAATGACAATACTTTTGTCTTTGCTCAAT
TCAattaagcccccccccccagtggtttgcatgaatgcgtgaaatttgaa
aaaaaaatgcgttaatgcgtgaattgaaaaaacttgcgtgaacgtgaaaa
tccactttttgactgcgtgaatgcgtgaatctgggctattttgtgcgtga
atacgtgattGTGTGCAGTGTttccgattttccaatgttgccccgatttt
tcccgaaaattttcctattttctgaaaaattgggttattgcgtgaaactc
gaggaaaatttgcgtgaatgcgtgaatttcgaaaacaaATTGTGTGATTG
catgaattgagggtccgctgggggggcctcttataaaatcattgtaaagg
taAGATCagcaataagaaatttaaacaagcacaaaatggttGGGTTGAAA
GAACTCTTATTTTTGCTTATGGGTTGTAAGTTTGAATAAAGTAATATGGA
TCTTCAGACTAAAATAGAActaattactaaattttttgagaGATCTTCGG
TAATGATAATTAGTAATGATTGATTAGTAATTATTTGCAGCTTGCGTTAT
TTTAATCATCTGTCAAAATTATTTGCAGCTTGCATTATTTTAATCATCTG
ATGTTATCCATGGCATGGCAAGCTGTGAAAGCTTTTCATCGAAGATGGGG
GTAAAAATGGTGAATCCACCTCCATTCAATGGAGGAATGCCAAATCTCTT
GAACTGTGTACTTGAACTATGTAAATTAATATTCCTCTCTTCTAGAATAT
TAGATAGAAAAATATTAGGTAGAGATCATAaagaaattatcttttcaacg
aacaCAAAAAGTCGAGCATCATATATAAATCAAAATGGACAGGTaagatt
tgtttatttttgtgccATTCAGTTCATATCTTCTACCTTATGATATCTAC
GTATTTTGTTCTACATAGTTTACATAGTACCATAGTTTACAcgcttttct
tataaaaacatccaaaactttgaagcctaaaaatgttcttattttcacca
ttgtgTGAGTCTTTTAGTCCATTTTCCTAAACATAAGTGTTTTAGGGTCG
CTGATTAGAAAGGGTTAACTAATGCATTGAACGAGTCCTTTCTTCGGTTT
TTCCCTCGATAAAAATACAAAGTGGCAATAATTATCAACTAATTTTTCGA
ATTCTCTTGAAGTCTTTTGAATCTGGTAGGTGTATATACCGTATTACATC
GTATAAACGACCCCTTCTTTAAAACGCCCacttgaataaacgccccctcg
aataaatgCCCCTCCTGAAAGGAAAACTACTTAACAAACTCCCTCCCAAA
TAAACGCCCCNACGTATTTTGTTCTACATAGTTCACATAGTACCATagtt
tacacgtttttcttataaaaacatccaaaactttgaagcctaaaaatgtt
cttatttgcACCATTGTGTGAGTCTTTTAGTCCATTTTCCTAAACATAGG
TGTTTTAGGGTCGCTGATTAGAAAGGGTTAACTAATGCATTGAACGAGTC
CTTTCTTCGGTTTTTCCCTCGATAAAAATACAAAGTGGCAATAATTATCA
ACTAATTTTTCGAATTCTCTTGAAGTCTTTTGAATCTGGTAGGTGTATAT
ACCGTATTACATCGTATAAACGACCCCTTCTTTAAAACGCCCacttgaat
aaacgccccctcgaataaatgCCCCTCCTGAAAGGAAAACTACTTAACAA
ACTCCCTCCCAAATAAACGCCCCNtatgaatatttttatttttttggact
ttttgaatTATAAGTTATAATTTAGATCTAAAAATTACACAAAATTTACC
ACATATTCCTGACGCAAACTTGAAGAGATTCTATTTTTGTGACCTTAATT
AAGAATCgagaatgaaagtgaagatTGTCACCTGATAATTTATAGCCTGG
GAGCCAAAcctgaaaaatgacattttgcttaacccaagattctacaggat
aagctatacatttttggaatcctcaactatcctagtttaagaaatgttcg
gtccccaaagctaactcctggtcaatttttcatactgggcccaaGTTTAG
GGGCTACTTTTAACCCTTTCTAtagatttgttaaggaaaatacaTTTCCA
TGTATGATTAATTTGCTATATCACATGAATAAATTGACAAATTGCTTCGA
AACTTTGCCTAAAGATAGATTGGTGATCAAAAATcattggcaaaaaattt
tgcgaaaaattattttttgggatTTACCTGGGGGGAAATAGGGAAAATTA
gggtattttcactgaatttcataagactgggacctaccaaaacaactttt
aataaggcacaaactttgtgttatgataaaatttgatgcgatacaccaga
aaaatttcttgtcaaatGTATTTAGTATCATTTTCGACGCTttagggggt
aaaaatgcccgtTTTAttgaatagacgatatcggctttccgaattctcct
cgaatgattacccatgatgcattgcgcaaaaaattcacgaaaagtcgata
tcgtccgtgaatttttttgcgcaatgcatcatagTAAAGGGGCCAAGCCT
TGGatcccgtgacatcttttctacgacctagccatttttagtctattcca
aagaacagtatattacaagatgtttttgagagggaggacgcggactaggc
ccgggaaaactttttatgacaaaaatagtgacgccataggcaaaactgca
agggaaaataggGTTAGAgaaatagctgattttcaaaagtcaaaataaac
aaaaatgattggtaccttctgaaagagcatgaaattctgagcaaaaaatg
tattacaacaactctctgactaaaacacacaaagaaatacagccacttga
agttcaaaaacataccgacgtcagtacgttcaagacaagatttgacgtca
aatcacagtagCTGACAGGTATAGTTGGTCTTAAAGCAGCTGTATtcttt
tgtgtgttttagtcacagagttgttgtaatacaattttttgctcagattt
tcatgctctatcagatggtaccaatcattttcgtttattttgacttttaa
aaatcagctatttctctaccccttgttttcccttgcagttttgcttATGg
agtcactattttggtcataaaaagttttcccgggcctaatctgcgtcctc
cctctcaaaaatatcctgtgatatactgttctttggaatagactaaaaat
ggctaggttgtagaaaagatgtcacggaaccccaggcttggccccctact
atcaTGGgcaatcattcggggagaattcggaaagccgatatcgtctattg
ttacATAATTCACTGGTTATCTCgcttgaaatgttttttagaaataattt
gaatttgaatttagtGTAATATACTCTGGAAAATTACAATTCTGACTTGA
AACTATCACATTCAGAGTGCAACTgcggacaaaccagggggtaaaattgg
ctattttattggatttttatcgatttttattgatttatgGGCCCATTTGA
CCCATAGAACAGTATTAATTAAGGTGTACAAAGTTTGATTTCTAACTACT
GGAAAACATtgatacaaactttaaattacAATTCCATCATTTCTTAGTCC
TTTTGATGACAGCACAACATTCCGATGCCTTTAACTGAACTTATGGCTGC
ATAGTTACAGTTACTTAATGGTAACTTTGTTAGCTTTTGCTCTGAAATTC
TTTGTACTGCTTCTCAGGACCTCCCGAAATAGTCCCTACTAGCAGCGTTT
TAAGTACAATTATTATCTCGAGTCTCTGGTATTTGATAAATAATTGCTAG
AAGGCgtagaaataaaagtgatattttgcGGGTTAAGGGGGATACGGCCT
GCCTGACGAAGAAAGCCAAATCATCTTCGATGAAAGTAGAACTTGATGTT
TTCTATAAGGTCATGCTTGGAGGTGACTTCTCTTTTTTTCCACCATTTTA
CTTTCCTTTTAACAGTGGCTTGCCTCAAAATAAGAAGTTCTACTTAAAAA
CCAGCAGTAGTGACCGTTTTGGGAGGTAAAAGCTGACAAAATTACGCTAA
ATCACTGTAGCTATGTTGCCATAACTTCAATTAAAAGCATCCAAACGCAA
CTGTGAAATAGAAATTGGcatatttaccccctgatttgccaCCTGTATCC
CTAATGCCAGATAATGAAAACCACAGATTGCTTTCCTCTATTTATCTGTC
AGAAAGTATCAATGTTTCCAGTAGCTAGAAATCAAACTTTGTACACCTTA
ATTAATACTGTTCTATGGGTCAAATGGGCCCAAAAATCAACCAGTTTGTC
CAGTTTCACTCTGAATGTGATAGTTTCAAGTCAGAATTGTAATTTTCCAG
AGTGTATTACACTAAAGCGAATtagaactattttcaaaaacatttcaggC
GAGATAAGCAgttaaaattgctcaaattatgtaaaaattcaatgaaatgg
GTATTTTTACCCCCTAAAGCGTCGAAAATTATACTAAATATATTTGACAA
GAATTTTTTCTGGTGTAtcgcatcaaattttatcatcaCACAAAGTTTGT
GCCTTATTAAAATCGTTTTGGTATGTCCCAGTCTCAGaaagtgtcaaaat
tcagtgaaaatacccAAACTTTTCCTATTTTCTCCCAGGTAAAtcccaaa
aagaatttttcccaAAGTTTTTTGCCAATGATGATCACCAATTTATCTTG
AAACtttaggcaaagtttcaaagcaattggtcaatttattcatgagatat
agcaaattaATCATACATGGAAATATATTTTCCTTAGCAAATCCTTGCAA
AGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNccccccccc
cccgggtatgaAGTAATGACAGTAACGTCCGTtcaacattcgatttttta
cgATTACATCACTTTGTACTTTAGAAGCTCTTGAAGCAgcgaaaaaattg
gaaacactTCCCCCAAAACTAAAGTGTTAACCGGTTTTTGGTGAGATACT
GCGCTCTCGCTAGCTAGTAACAATGTCTTTTTTTAAAGGTCCAGGTCAAG
GAGGTGGTGTCATACAAGGAAGTATGAGCGAAACTATACTCATTGCCATG
CTAGCTGCCAAACATCGTATGCTTGAAAAACATAACTTGAACCAAGTTGA
CGCTGCTTCAAAACTTGTTGCGTATGGATCAAAACAAGCGCACTCGTCGT
TGGAAAAGGGAGCTCGGATTGCAGGTACACAACTTCGACTTTTAGATATG
GATGGCAAACACAGCATGCGTGGGGAGGTTTTGGAAAGTGCAATCAAAGA
AGATAAGGCTAAAGGTTTGATGCCATATTTTGTTTGCGCCACTTTGGGTA
CCACAAGTTTATGTTCATTTGATGCGATTGATGAAATCAGTGCAGTGGCA
AAACAAGAAGGGTTGTGGGTGAATGTAGATGCGGCTTATGCTGGCGCCGC
TCTGATTTGTCCGGAGTATAGATACCTCATCACAAATTGGAATGGAATTG
ATTCTTTCGCTTTGAGTTGCAATAAATGGCTTATGGTCACGGCTGATTGC
GCCGTCATGTTTGTTCGAGATTCACTGGATTTACTAAAGACCTTTAATGT
TGATCCACTGTATTTAAAACATCAGTATCAAAAAGAAGCAGTTGATTTCC
GACATTGGCAAATACCTTTGTGTCGGCGTTTTCGATCTTTGAAATTATGG
ATGGTATTTAAATGTTACGGGGTTGCTGGCCTTCAGCATAACATACGTAA
ACAGACGCAGCAAGCTAAAATGTTTGAGAATTTAGTTAAAAGTGATTCTA
GATTTGAGGTTGTAAATGATGTCAAGATGGGTCTCGTTTGTTTTCGATTG
ATTGGCGATAACAGCCTTAGCGAAGAGTTGAACAATCGAGTCAACGAGGC
AAGAAAAATTCACATGTCACCTGCTAagaccgaaaaaaaatattttttgc
gtttGGTTGTTTGTTCGCGATGGACAGTGGACGAAGATCTTGAATTTGCT
TGGAACGAGATACAACATCATGCTAATGAAATTTTAATGgaacaaaaatg
aataaacctTCCAGGATTTATAGAGGTCTGTGACGAAGAACTGAATCATA
GATATCGAACAAAAGTAGCTTCCTAAATGGGAATCTAGAAGGCCCTGCAA
GTAAATCTTTTTTGTGGGTTTTAAGATACAAAGTGTGTAATGGGTATGAA
TTAGAGGCAGAATACAATTTTAGTAATTATAATTTTCTAATCCCATCGAA
GAGAGTCTACGTAATGTTCTAGTTGGTGaattggggagttgctagtttcg
agttggaaAGTTGGTAAAACTTAAAggcgaccgaaaattttctaatttaa
actaatgtagcccaaaagtacaagGGAGCTAAATAATGGGTAgatgttat
atcggatggccaaagtcactttttttaatttcctatctcttatcctattt
ttctcttttctgactgtctgagagtttgtttttcattttctaactATCTa
tgttttctaagttttgatcTGTCAATCATATTTCGTCCAATCAAATAGGG
TACGAACCCTCGCCAAATAAAGACCTTCGGTTCCGGAAGCCAGCACTCTA
TCCACTGAGCCATCGTCGCATGCTAGATTCTGCAATTTGAAAGAACTTAT
ATTCGAACGGACAAATCTCTTTATATATATGAaactcccaaccctaccgg
tgctcctacaaggatcccttcgggatcctaagttaagtGACTGGGTACGA
GTGCCCCTATGAGGACCTCCGGTCCtttattgtgactctcgagctccaac
cctgaccctaactgatgataaccgaacccccgtcttcCAGGGTGACTTTT
ATCGATGCGCGGATGAGAAAATAAATAAGGTGACTTTTGAGATAGATGCA
ACGTATCATTGGTCTTTATATATTATCCTTTTTATCTAATACATACTATA
CTTTTtatctatgtatctaaatatctatgtatccattatctatatatcta
tatatccatgtatctatatatccatgcatctatatatctatgtatccatg
tatctatatatctatgtatccatgtatctata
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027196-exon-sc0000609-1491911889:35312..35486 | TCONS_00027196-exon-sc0000609-1491911889:35312..35486 | Clytia hemisphaerica | exon |
| TCONS_00027196-exon-sc0000609-1510915933:35312..35486 | TCONS_00027196-exon-sc0000609-1510915933:35312..35486 | Clytia hemisphaerica | exon |
| TCONS_00027196-exon-sc0000609-1575043694:35312..35486 | TCONS_00027196-exon-sc0000609-1575043694:35312..35486 | Clytia hemisphaerica | exon |
| TCONS_00027196-exon-sc0000609-1491911889:35752..35766 | TCONS_00027196-exon-sc0000609-1491911889:35752..35766 | Clytia hemisphaerica | exon |
| TCONS_00027196-exon-sc0000609-1510915933:35752..35766 | TCONS_00027196-exon-sc0000609-1510915933:35752..35766 | Clytia hemisphaerica | exon |
| TCONS_00027196-exon-sc0000609-1575043694:35752..35766 | TCONS_00027196-exon-sc0000609-1575043694:35752..35766 | Clytia hemisphaerica | exon |
| TCONS_00027196-exon-sc0000609-1491911889:44265..46293 | TCONS_00027196-exon-sc0000609-1491911889:44265..46293 | Clytia hemisphaerica | exon |
| TCONS_00027196-exon-sc0000609-1510915933:44265..46293 | TCONS_00027196-exon-sc0000609-1510915933:44265..46293 | Clytia hemisphaerica | exon |
| TCONS_00027196-exon-sc0000609-1575043694:44265..46293 | TCONS_00027196-exon-sc0000609-1575043694:44265..46293 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000609 | supercontig | sc0000609:35312..46293 + |
Blast
BLAST of TCONS_00027196 vs. Swiss-Prot (Human)
Match: DDC (Aromatic-L-amino-acid decarboxylase OS=Homo sapiens GN=DDC PE=1 SV=2) HSP 1 Score: 392.889 bits (1008), Expect = 9.088e-128 Identity = 194/401 (48.38%), Postives = 267/401 (66.58%), Query Frame = 1
Query: 4 YFPTANNYASLMGDMLSDAFSCIGFSWIASPACTELEMITMDWLTKSLGMPEAFHHSXXXXXXXXXXXSMSETILIAMLAAKHRMLEK-----HNLNQVDAASKLVAYGSKQAHSSLEKGARIAGTQLRLLDMDGKHSMRGEVLESAIKEDKAKGLMPYFVCATLGTTSLCSFDAIDEISAVAKQEGLWVNVDAAYAGAALICPEYRYLITNWNGIDSFALSCNKWLMVTADCAVMFVRDSLDLLKTFNVDPLYLKHQYQKEAV--DFRHWQIPLCRRFRSLKLWMVFKCYGVAGLQHNIRKQTQQAKMFENLVKSDSRFEVVNDVKMGLVCFRLIGDNSLSEELNNRVNEARKIHMSPAKTEKKYFLRLVVCSRWTVDEDLEFAWNEIQHHANEILMEQK 1185
YFPTA++Y +++ DML A CIGFSW ASPACTELE + MDWL K L +P+AF + G+GGGVIQGS SE L+A+LAA+ +++ + L Q KLVAY S QAHSS+E+ I G +L+ + DG +MR L+ A++ DKA GL+P+F+ ATLGTT+ CSFD + E+ + +E +W++VDAAYAG+A ICPE+R+L+ DSF + +KWL+V DC+ M+V+ DL F +DP YLKH +Q + D+RHWQIPL RRFRSLK+W VF+ YGV GLQ IRK Q + FE+LV+ D RFE+ +V +GLVCFRL G N ++E L R+N A+KIH+ P K+ LR +CSR ++ AW I+ A ++L ++
Sbjct: 79 YFPTASSYPAMLADMLCGAIGCIGFSWAASPACTELETVMMDWLGKMLELPKAFLNEKAGEGGGVIQGSASEATLVALLAARTKVIHRLQAASPELTQAAIMEKLVAYSSDQAHSSVERAGLIGGVKLKAIPSDGNFAMRASALQEALERDKAAGLIPFFMVATLGTTTCCSFDNLLEVGPICNKEDIWLHVDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFDCSAMWVKKRTDLTGAFRLDPTYLKHSHQDSGLITDYRHWQIPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFESLVRQDPRFEICVEVILGLVCFRLKGSNKVNEALLQRINSAKKIHLVPCHLRDKFVLRFAICSRTVESAHVQRAWEHIKELAADVLRAER 479
The following BLAST results are available for this feature:
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