|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027241 ID=TCONS_00027241|Name=TCONS_00027241|organism=Clytia hemisphaerica|type=transcript|length=1402bp
CGCTCATTGAAACCTTTAATAGTTGCAAAAATAGGCCTTAAAGCCTCCTG
TATGCAACTCaatcaaatagaaatagaaatatataTAGGTTTGTAATTGC
TGGTATTGGATGGGTGGAATTTGCTAGATGGTAATTTGGCTGGGTGGGAT
GGGCTGTTTGAATAGCAATTCGGATGGGTGGGTGGATATCTGGCTGGGTG
GGGAGAGTTGAGCGGGATCAACATGGATTGACAGACATGTGGTGGCGGTG
GATGGGGGTCAGGTGTGGTGGTGTGGTGGATGAGGATCTCCTGGGGATGA
ATACAGCACAGGGATCACCTGGGTGGATTGATATCAGGCTTGGTAGATGG
TTCAGGCACGACGCAAGCGATCGCTCTCGTGCTCAGTAGAGCTCTCGTCA
ATCTCGTATAGCGAGCGAGCGAAAAATCGCTCACATCAATTAGGTTTCCA
TTATGATAAAGTTATCTTTGTTTAAGTGGGATCTCACATGTCTGAATAAA
CCCTTTTAGAAGTCTTTATATATTCACTTCATTGtttattaaaaatgata
atctcTTCCTACAGTAGTACACAATTTTGTTTATTAAAACCTTCGTGTTT
TGTTTACCACTCGTcaaggatttttgaaaaatttttgtttaataactaca
tattttttatataaggaacacgtttataaggaactcgaggctgaaaaagg
TACGAAAAGTAAGAAACTGCTCAGGccgagaaaaaagaaaacaagttgAG
GAGCAGAGGGTTAAACTTTAACTTGTTCACGTTTACAAAGGCCTAAAAGA
CGACAAATATTGATGAAACAGCATTCAAGACATGTCTTTTTCTGTACATT
AGCCCATTGTTTTACTTATACATAAGTTACATATATACTTAGCAAATCCA
ATACTAGTGGCTAATTAAATAAGGAACtcaataaggaactttgaggctga
aattctctttaaaataagcaactccaggctcagagccaAGTTaaaaggtt
ccttataaaaaaatgtgtaagagGCATGAGTGACTTCTTGTTGATCAGAC
TGTAAACATCTTGAAAATATTAACTCTTCATAAtccagaatttatttttc
acaatCCATGGCATGTGGCTTGGATTGGCTGCTGGGTGGATAGGGATCAC
CTGAGTGGATTGGAATTTGGCCTTGTGGATTGGTTGGGGGTGCCTTGGAC
CCAGGTGGTCGGGTGGATTTGGGGTGTCTGGGTAGATGGGGATAGGGTTT
GGCTGGGTGAATGGACTTGATGGCATTGCGCTGGACAAATAGGGATCACC
TGGATGGATTGAATCACCCATGCGGATGGGATAATTGCATGGTGGATAGG
ATCAGCTGGGTGAATAAGAATCGCTTGGGTAAATGGAATCAATTGGGATG
GA Run BLAST on NCBI transcript from alignment at sc0000611:14730..16131 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027241 ID=TCONS_00027241|Name=TCONS_00027241|organism=Clytia hemisphaerica|type=transcript|length=1402bp|location=Sequence derived from alignment at sc0000611:14730..16131 (Clytia hemisphaerica)
TCCATCCCAATTGATTCCATTTACCCAAGCGATTCTTATTCACCCAGCTG
ATCCTATCCACCATGCAATTATCCCATCCGCATGGGTGATTCAATCCATC
CAGGTGATCCCTATTTGTCCAGCGCAATGCCATCAAGTCCATTCACCCAG
CCAAACCCTATCCCCATCTACCCAGACACCCCAAATCCACCCGACCACCT
GGGTCCAAGGCACCCCCAACCAATCCACAAGGCCAAATTCCAATCCACTC
AGGTGATCCCTATCCACCCAGCAGCCAATCCAAGCCACATGCCATGGatt
gtgaaaaataaattctggaTTATGAAGAGTTAATATTTTCAAGATGTTTA
CAGTCTGATCAACAAGAAGTCACTCATGCctcttacacatttttttataa
ggaaccttttAACTtggctctgagcctggagttgcttattttaaagagaa
tttcagcctcaaagttccttattgaGTTCCTTATTTAATTAGCCACTAGT
ATTGGATTTGCTAAGTATATATGTAACTTATGTATAAGTAAAACAATGGG
CTAATGTACAGAAAAAGACATGTCTTGAATGCTGTTTCATCAATATTTGT
CGTCTTTTAGGCCTTTGTAAACGTGAACAAGTTAAAGTTTAACCCTCTGC
TCCTcaacttgttttcttttttctcggCCTGAGCAGTTTCTTACTTTTCG
TAcctttttcagcctcgagttccttataaacgtgttccttatataaaaaa
tatgtagttattaaacaaaaatttttcaaaaatccttgACGAGTGGTAAA
CAAAACACGAAGGTTTTAATAAACAAAATTGTGTACTACTGTAGGAAgag
attatcatttttaataaaCAATGAAGTGAATATATAAAGACTTCTAAAAG
GGTTTATTCAGACATGTGAGATCCCACTTAAACAAAGATAACTTTATCAT
AATGGAAACCTAATTGATGTGAGCGATTTTTCGCTCGCTCGCTATACGAG
ATTGACGAGAGCTCTACTGAGCACGAGAGCGATCGCTTGCGTCGTGCCTG
AACCATCTACCAAGCCTGATATCAATCCACCCAGGTGATCCCTGTGCTGT
ATTCATCCCCAGGAGATCCTCATCCACCACACCACCACACCTGACCCCCA
TCCACCGCCACCACATGTCTGTCAATCCATGTTGATCCCGCTCAACTCTC
CCCACCCAGCCAGATATCCACCCACCCATCCGAATTGCTATTCAAACAGC
CCATCCCACCCAGCCAAATTACCATCTAGCAAATTCCACCCATCCAATAC
CAGCAATTACAAACCTAtatatatttctatttctatttgattGAGTTGCA
TACAGGAGGCTTTAAGGCCTATTTTTGCAACTATTAAAGGTTTCAATGAG
CG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027241-exon-sc0000611-1491911889:14730..16131 | TCONS_00027241-exon-sc0000611-1491911889:14730..16131 | Clytia hemisphaerica | exon |
| TCONS_00027241-exon-sc0000611-1510915933:14730..16131 | TCONS_00027241-exon-sc0000611-1510915933:14730..16131 | Clytia hemisphaerica | exon |
| TCONS_00027241-exon-sc0000611-1575043694:14730..16131 | TCONS_00027241-exon-sc0000611-1575043694:14730..16131 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000611 | supercontig | sc0000611:14730..16131 . |
Blast
The following BLAST results are available for this feature:
|
