TCONS_00027295 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027295
Unique NameTCONS_00027295
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3607

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027295 ID=TCONS_00027295|Name=TCONS_00027295|organism=Clytia hemisphaerica|type=transcript|length=3607bp
caaacttttctgTAGTGTTTGTTAATTATGTTTACAAGTTTGTTCTATTT
GTTAAACATAAGATGAATCAACAACAAAAGCTTATTATTCTTGCTGGTGG
GTctgctttcattttcattcttgGTTTGGcatattttttgtcaaagaaaG
ATGAGGAGTTTGAAGATGATGACGAAGAAGAGGATGAAATTCTTGATGAC
AGCAGcgaaaaggaaaacaaaaccaAGTCAACCCGAAGTGAACTACCAGA
TTTAAATGCTGCAGTTGCAAGTGCTGCTCAGTTTTCGGTTGACATTGATG
TTCCAAAAAGAATTGTTGGAAGTATTATTGGAAAAGGAGGTTCAAACATC
AAACAGTTGAGAAATGAATTTGCAGTCAGaCTTAACTTTGAGAAGGAAGA
TGAGTtaactgaagaagaaaaagaaagcaaacCAGTTCGAAAACTGACAA
TAAAGGGGGAAAGAGAAAAGGTTTTAGAATGTGAACAGAAGGTGAAGAAA
ATAATTTCAGACACTCCAGAGTTTATTACTGCTGAAGTTTTTGTACCTCA
AGAAGCATGTGGCCAAATTATCGGAAAAAGTGGACAGAGTATCAGGGAGA
TGTGCAGTATATCAGGAGCTAAAATCAATTTGGAGAGAGATGTAGACCCC
ACTTTGAATGGTCTTCGCAGAGTGGAAATTTCTGGTGCATCTACACAAGT
GGATTATGCAAAACTTCTTATTGAGGAGAAAGTTGAAGTTGCTAAGAAAC
TCAAAGCAAAAGATGAATTGAGGGTTTTATCTTCCAAACAAGTTGCTGAT
GCAAAACCTGAAAATGTAGCAGAGAATTTACCACAGACCTACAAATGTAT
GCCTTTCCCTGAGCCTGACGAAAATGGTTACTTCAAAGTATTTGTATCTG
CCTATGATACACCAGACCGTGTGTGGATTCAACCTTGTACTACAGAAAGC
TTGAAGCTGGAAGCACTCAATGAGAAACTGAAACTTGTTTATGGTAACAT
GTCAAAAAACCAAGGGCAGCTAATGCAAGGAAAGAAAGGTGAACTGTGCG
TGGCACAACATAAAGATGGGGAATGGTATCGAGCAACCATTGTATCCATC
AATAGAGATCGAACTGCTGAAGTTCTTTTCATCGATTATGGAAACGTTAT
CCTAGTCAACCTTGACGATGTCAAGGCTATCAAACCAGAATACAAGGAAC
TTCCAGCTTGTGCTTCAGAATGCTACTTGCCCATTCGTCCGAAAGGAAAC
CCATACTGGACACAAGTATCAGAAACCCACTTCAAGAAACTGATACACTA
CGGTGGCTGGATAGCAATGTACGCCAACGTGCTTGGGGAGAAAGATATAA
ATGGAAAGAAACTTAATGTTATCGAAGTTATACATCTTGAACAAGAAgag
GATATTTGTGATCACATGGTACAAAGCAACCACGCTGAATATGATGATGA
GTTTAAAACGACAAAGAGCAAGTTTGCACAACAACAAAAACCTTCGGCAG
ATGTCGTGACACCTGAAATCCTTGAAATCCCTGAAATTCCCATTCTCGAA
GACGTCATCCAGCCAGAATCTATCCATGttgttgaagaagaaaatgttaT
CCCTTCAACTGAAGATGCAATTGAATCTTCAATCGAAATTATCGAAGAAA
TTATTCCACTGGATGTTGAAAGTAATGTTGAATCTGCTCCTGAAATCGTT
GAACCTGTAACTCGAAATTCTGAAGAAGTGTCAGCGGAGAGAAACAACGT
TGAGGAAGCAGAGGGAACGTTGTTATCTTCAAAGTTGGATGACACGTTAG
CATCCTCAGACACACTAGAATCAACTGATAGTGGTATTACTAAGGATTTG
AAATCATCAGATTCTCAAGACCCACAAATCACCACAGCTGAACGTTCAAT
GCCAGACTTAGAGAATGTCGGTAAACAAGCATCTGTTGATGATTCATTTG
TGGACATTGATATGATGTCTGTTGATGGAGCTGTCAAGGCTGTTGTCAGT
GACCACATTCCGCCAGTGACTCCTCAAAAGGTCGGAGATTCCAATGTTGA
TGAGAGTACCCTAGAAACGCCAGTATCCACTAATGTTGAAACTGCACAAG
CCACCAGTATTTTAGAGGACGAAGTTGACAAAAAAGGACAATCTGATAAC
AATGAAGACGTTGTACAATCTGCAATTGACTCTACCGATGACCGTATTGA
AGTTGATGTTCCGgttaagaaagaagaagaaacattagttgaagaaaatt
taccgGTGGccgaagatgaagatgaagatgaagatgaagacgaAGAACAC
GCAGAATTACAACGATCTTTAGACGAAACGAGCAAGAAGAATGTCTTTAT
AAATTCATCGATGGAAATGGCACGAGAGAATCTCATCCTTCTCGATAATG
GTGATTCGTCGACCGATAACGACTCCTTCTACAGCGCACGATCAGACGTC
ACGTTAACCGATACCGATAATTTGAGCTTCATGACGGCCACTGATCGTAT
GACCCCTTCCAACGAAATTTCTTTTAGTATTCCCGATTTAACCAATAGTA
GCCCGTATGGGTCACAAACAGACTTGACTAAAAGTAGATCTAAAAGTGAC
TTATCGACCAAAAGTAAATCTAGGAACAGTTTGGGTGGGTCAAAATTTGA
GATTCAATTTATTGATGAAAAGACACATAAAGTGATGTCGAGAGAGTCTC
TGACTGCTTCTTTTGAAGCCTCTGGTAGTCATATGAGTAAACAACAGAAA
CGATTATCAGCTCCAAGATCTCCTGGTAAAGAAACCCCAGTATGATGAGT
GTTAGGTTTGTGGTAGACCATTACCATGCAATATTAAGAATGTGGTAAAT
TGTTTACAATCCAATTTTAGGAGTGAATTTTTAAAAGCAAACTTATATAC
CAATTTTAAACTTCTTTTATAACAGACAACTAGCGAGCGATCTTATATGA
GATAATATTTTGTGTTTATAATAGCACCATGATTTTGAAGTATCTAATAC
TAATGTTGATTTGTAGTGTTTCTTAAATTTAACCTTCAAGTACTGGACTC
GGGTAAAGCTTCTGTCATTACAATAATTGTCTGAAAACTCTCTCTAAATT
TTCACTTTACTTTTTTGGCTCTATTCCAAAATTTTGGTCCCGACAAACTC
GATTGTAGTACCTCTTGGTTCTAGATCATAATGTTTacgtagatttaaaa
aaatactttttcttaTTTCGTTCTTATGCAAATTATCTACTTTTGGTTCT
TTTTATTGCAGTCTGTAAAATTCATTTAATCATAGATCCATTATTCAAGT
GCCAAATTTCTAAGAAACTTTGTTCATATCGTGAATGGTGTACTATAGAC
GCTGATTTTCAACTGCAATTACATTTCCGAGAAATATCTAAGTAAAGCAg
atgatatattttttattctcaTTAAAAGTTCATGAATTAATGTTTTCTTA
TTCAGCGTATATTTATTCTTCAATTCTTATACTTACTCAATATCAAGaaa
atattgttttatttttacccTAAAATCCTATGTAGGTCCTTCcttcttaa
cctttttttctttttggaaaatttaaagagcccttctatttttaaaaaac
tgggaAG
Run BLAST on NCBI

transcript from alignment at sc0000613:26366..39737-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027295 ID=TCONS_00027295|Name=TCONS_00027295|organism=Clytia hemisphaerica|type=transcript|length=13372bp|location=Sequence derived from alignment at sc0000613:26366..39737- (Clytia hemisphaerica)
CAAACTTTTCTGTAGTGTTTGTTAATTATGTTTACAAGTTTGTTCTATTT
GTTAAACATAAGATGAATCAACAACAAAAGCTTATTATTCTTGCTGGTGG
GTCTGCTTTCATTTTCATTCTTGGTTTGGCATATTTTTTGTCAAAGAAAG
ATGAGGAGTTTGAAGATGATGACGAAGAAGAGGATGAAATTCTTGATGAC
AGCAGCGAAAAGGAAAACAAAACCAAGTCAACCCGAAGTGAACTACCAGA
TTTAAATGCTGCAGTTGCAAGTGCTGCTCAGTTTTCGGTTGACATTGATG
TTCCAAAAAGAATTGTTGGAAGTATTATTGGAAAAGGAGGTTCAAACATC
AAACAGTTGAGAAATGAATTTGCAGTCAGGTAAAAAATTCTTAACATTCA
CTTATAAGTCTGAAAATAAACTTTTATTCACATAGCCAGACATATACCGT
GAGATCAGGTAACTTGCATCCAGTGGAGGCTAACATGCATACCCCTCACA
AATCCAGACGGTACTATTTAATCGATAAAATTCGATTATCGAAGTAAGGC
GGCCATCAAAAAATTGTTCTATTCGCGTCACCCGCCCGCATCATATTTTC
CCCTGATTTTCTGGTGCGGAGATGCGGGAAAAAATCCGGAAAAAGCAGTT
AGTGTAAAACACAGGTCACAGGTCACAGGTCACGGGTCACGGGTCACAGG
TCAGCTTTAATTACTGTAAAACACAAAGAAAATGTTGTTAATGTCAAAAA
TATAATTCCAAAGGTACTTTATTGATCTAGAACTGTATTATATATTACAT
CTATATCACACATGTAAAAAAATTATCTTTTCAATGTTATACGCATGTTA
TGTAAGTTATATACAAAGGATAAAGAAATATTCGAATATCGATCACACCT
TTGCTTTAAACAGCCCCTAACAGGAAAATAGCTATTTCACAATCACTATG
CATAGTTCGGACCCCCCCTTTCTTAAGGGGGGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNCAAAAAATGCCATTTTTACTCATT
TTTCGCTTTAGTGCGAATCAAAGACCCCCCTGGGGAATGCTGGATTTTTT
ACCTAGGAGGTTAAAATTTGCGCAAAATGTCTAACAATAGATTAAATTTC
ACAAAAAAATACTACACTTTGAATTTTTTGACTTTGCCATTTGACGATCT
ACCCTACTTTAAGATAACATCATTATTGACATAATTTAAGTGTCATTTGT
TGTCAATAATTGAGGTTGATGATTTGTCTTTAAGTCTTCTAAATAACATA
TTTTGATATTACATTTCCATTACAGATAATATTTTCAGGAACTTATGTTA
TGAGTTGTGTGTTACGAGTGTGTTACAGTTTTCCGATCTGTAATTTGTAT
GACCTGTGACCTGTGACCTGTGTTTTACACTAACTGCGGAAAAAGCCCGG
AAAAAGCAAATTGTTCTTTTGACGTATAGCTTTTTTCTTGATTGCTCTGG
CGGCCATCAGAAAATTGTTCTGTTCGTGTCACCACCTGCCCCCGACTTAC
AGAAGCGATTTTAAAAAACCCGGGAATTTTTCCGACCACCCGTCCGCCAG
CGTGCATTTTTAACACCTGTTGCGACGCGAACAGAACAATTTTTCGATGG
CCGCCTAATCGATAATGATCAAAGTAATCAAACAACCACTTACCGTGAAG
TCGGGTAACTTGCATCAGTGGAGGCTAACATGCATAGCCCTCAAATGAAT
GACCTGTCTGGTCCTTAAAATACAAAGTTAAATCAAAACAAAAATGGTAG
AGTAGAGCGGCAACCGGAGCTACGTAGTTCATTTGTTTTGAAATTTTGCT
GCTCTGATTTGTCAGTCATTTGAGGGCTATGCATGTTAGCCTCCACTGAT
GCAAGTTACCCGACTTCACGGTATCGATTAATAATTGAATGTCGAGTACC
AAAATTTCAAAAAAATTGTGAGTATTCGATCACTTTCTTAACCCTTCGAA
GACTCAATAACCGTTCGAGTACTTTGATTGTTATTGATTACTTTCGATAA
CTTTGACAACTTCAATAACCAATTGATTACTTCGATAACCAATCACTATG
ATATATTTTTAAGAAAAACAAAAAAAACTGACCTAAAACCAAAGCACAAA
AAGAAACCCCGCCATAAAGATTGACCCCCTTATTTCCCAGCCATTTTCCC
CTCCATTTTGTGTGCCTTCGCCTTGGGTTTCCTCAAGTAACTCAAATCAC
GCATTCTGATCGGTCGAAGAAAACGAAAGTGGTTTTCGTGGCGTGAATCG
GTGTTTTTATTGGCCTAAAAAAACTTGGTTTCAGATTATTTTGACGTGCT
TCTATTGGAAACATATTTGATAAAATCGAAGGCTGGAAAGTACTCAATAC
AATCGAAGGTATTCAATATGATCGAAGGTAATCAAAAAGTAATCGAAATG
ATTGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNTTTCAAAATACATAATCATTCAAAAATACA
TACTAACTTTTTAAAATACATACTTATCTTCCAGATACAAATACTATATT
CAAATATTCAAATATTCAAACTATCTTTTCAAAATACATATATACAACCT
TTCAAATATAAACGCTATCTTCAATCATTTTTTANCTGGTCATTAAAATA
CAAAGTTAAATCAAAACAAAATGGAGCACCCTCCCGGCACTCCGGAAACT
TCCGGAGTTTTCCGAAGCAGCTAAAAAAACACTATTTTTCTCTCTCTTCC
GGAGCTCTTCCGGTGCTTCTCTGGAGCAAGTGATTTTTAACATGTTCTAA
AAACTATTTAAACATGGTTATATACAAAAAATAAAATATTTGTCCCCAGG
TGATGGACTTTGGTCAAATAAAATACTTTACAGTCTTTGAGGATGATGGT
TTATGGCGCGCCTGAGCGGACAAAAATACTATCTTTCAAAAAATACATAC
TATCTTCCAAAAATACATACTATCTTCCAAAAATACATATTATCTTCCAA
AAATACATACTATCTTCCAAATATAGATACTTACTCAAAAATACATACTA
TCCTTTCAAAATACATAATCATTCAAAAATACATACTAACTTTTTAAAAT
ACATACTTATCTTCCAGATACAAATACTATATTCAAATATTCAAATATTC
AAACTATCTTTTCAAAATACATATATACAACCTTTCAAATATAAACGCTA
TCTTCAATCATTTTTTATTAAGGGCCTATCTACACCATGATTTTATCAAT
AAGGTACTGTAGGTCATACGATCTAACTAGCTAGCACATGCGTACTCCTA
GTCTCTTATCAGTGACTAGTGTAATGGGAACAGTGCAAGTGTGATAATTG
TGGGTGTAGCTGGGTGTAGTGTTTGACTCCAACGAGTGGTCGATTGCTGG
ATCGTGGTATATGCTTTGCCAAATCACGGTTTATTGATAATTTCGAAGTT
GAATATACCAACCAACAAATTCCTGAGCCTGAGACTTTTCTTGTTTGAGA
CTAGATTTTTCTTAAGNAACGAGTGGTCGATTGCTGGATCGTGGTATATG
ATTTGCCAAATCACGGTTTATTGATAATTTCGAAGTTGAATATACCAACC
AACAAATTCCTGAGCCTGAGACTTTTCTTGTTTGAAACTAGATTTTTCTT
AAGTTTCCACGTGTCTACAAGGTGTGCATGCTCCAATAAGAAAGTGAGCT
TGATCGTACGAGGTCAAGTACTCATCCTCACCTTTATCATGTAGATGGGC
CCTTAATGAAAAATATACATACCGCTAGGGTATTTTGAAGATCACACATA
TTTTTTTAAAAGATAGTATGTATTTTTTGACGTTAGTATGTATTTTTAGA
GGTAAGTATATATTTTTGAAAGTTAGTATGTATTCTTGAATGATAGTGTA
CAAATTTGAAAGATAGTATGTATTTTTGAATGATAGTATCTATATTTGAA
AGATAGTATGTATTTTTGGAAGAAAGTATGTATTTTTGAAAGATAGTATT
TTTGTCCGCTCAGGCATGTCATAATGGTTCAGCCATTAATGAAATTGAGT
TTGTCACATTATATTTGAAAGCATCACTGGTCAAAATATCGAAACTACCA
TGAGTCGGCTGATTTTTTAAAATATGCGTGTGGGCAGTTAGTTTTCACAT
GATAAGCACATATCGTAATTATATCACAGATATCATGCTCCAGAACACCG
GAATTGCACAGAAAAAACGACGCTTTTTGCTCCGAACGTTCCCGGAGTGC
TGGGAGGGTCTTCAAAATGGTAGAGTAGAGTGTCAATCATTTAAGATTAT
TGAATTGTCTTATTTTTGTTCTTTTTCAGACTTAACTTTGAGAAGGAAGA
TGAGTTAACTGAAGAAGAAAAAGAAAGCAAACCAGTTCGAAAACTGACAA
TAAAGGGGGAAAGAGAAAAGGTTTGTTATTTGTTGAAGGAAAAATGCTTT
GCAGTTGAAGGGTTTTAGTAAAATTATCATTTTTAGAATCATAAAATAGC
TTACCCTGTCATTTTACCTTAACAAAAAATGAAACTTTGTCAGGGCATAT
TTATCATGAAAAGCATTTGAAAAATTCAAGTTAAAGTTGTCAACAATGAT
TCTATCTCAAAATATTGACGTCCAAAGTTCCAAATTCAAGACATCTGCAC
TCTTTGGAAGCCATATAAAAATGAGGAAATTGGAAAACTTCTGTTCATAC
CAGCTAAAATAATTGAGAGCAGGCTATGTAAGGATACCTGTAATAATTTT
GGTCACATGATATTTAGAGAATTTATATACCATAAAAAGTCATTTAATTT
TTGATCCAGTTCTCTAATCTTTACCTATTATGGATAGAACTTTGGATGTA
AATATCTTTGGATAGAATCACTGCTGACAACTTTGATTTGAGTTTTTTAA
ATGCCTTCCATGATAGCTATTCATGGATTAAGTTTCATTTTTTATGTAGG
AATCTCTTTAAATTATTTCTTACCATAATTATGATAATGTGAAATTTAAG
ATTTTGCAGAATTTTGTGTGTTAGTGATGTAGCACAATAAATTCTCTTTT
AGGTTTTAGAATGTGAACAGAAGGTGAAGAAAATAATTTCAGACACTCCA
GAGTTTATTACTGCTGAAGTTTTTGTACCTCAAGAAGCATGTGGCCAAAT
TATCGGAAAAAGTGGACAGAGTATCAGGGAGATGTGCAGTATATCAGGTT
GGTATGGAAAACAAAAGTCAAAATTTATATTATATAGTTTACCATTTAGG
ATTAATTGTATTATCCCAATCAACAACTTTACAAAACCATTATTTACCTG
TATCTACCTGAATTATGAATTGAGTTTCTGCTGAAAGTCAATACAATGTA
GTAGTCTTTGGTTTTGATATTAATTTTTGTCTAGAATCAGAACTGACGTC
ATTCATTAATGAAATTTTATCTTTCATTTCAGGAGCTAAAATCAATTTGG
AGAGAGATGTAGACCCCACTTTGAATGGTCTTCGCAGAGTGGAAATTTCT
GGTGCATCTACACAAGTGGATTATGCAAAACTTCTTATTGAGGAGAAAGT
TGAAGTTGCTAAGAAACTCAAAGCAAAAGATGAATTGAGGGGTTTGTTAT
GAAATATTTTTAGCCACCGCAGCATGACGGTTGAACATACAGCTAGTATG
CACAAGCTTGTGGGTCTAACCCCACAGCCGGGTAATACTAAAGGTGGTTG
TGCTCAGGATCAAGAGTAAGTGGGAAAAACCAGGGGAAAGGAGAGGTTAC
CCCCCCCCCTACCTCTTGGTAGACAGCTAAGGAAATAAGATTCAGTGGAT
TGCCTTTACCTGCAATCACAAAGAAGTTACTTATTAATTATTTTATTCCA
AATTATTTCAAATGCAACATTGTACTTAAAAAATAGTAACTTTTTGGACC
TACCTCCGGGTGCCCCGGTGGAGGTCCTATAAATTAACCCATGTCCGTTC
GTCCGTCCGTCCGTTCGTCCGTCCGTCTGTTACCAGCTTTTCTCAGGATT
GGCTCATTAGTTTTTTCTGATTTTTTGTACAAAGATGGAGGGCAAGATTC
TCTAAAGACTGGCTGAAGTGGTTTTTCCCGGAAAATTCTTTTTCGCCTTA
AAAAACGGATTTTCGTATTTTGGGGAAATTCCCTTTAACCAAATAAGAAA
ATATAGCTTTTCTCAAAGTTGACTCATTAATTTTTTCTGATCATTTGCAC
AATGATGCAAAATGGTAATGCCTAAAATGTGACGGAGCCAGATTTTCGAA
AAAATATATATTTGGGCAAATTTTGGCCAAAAACTGCCTAAAATAGGGTT
TTTTGGACTTTGTGCAAAATCCTGTTATTACTTTTTTCAGATTTTTTGTA
CAAAGATGGAGGGCAAGATTCTCTAAAGAATGACTGAAGTGGTTTTTCCC
GGGAAATTCTTATTCGCCTTAAAAGACNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATATAGCTTTTCTCAATGTTGACTCATAATT
TTTTTCTGATTTTTTGCACAATGATGCAAAATGGCAATGCCCAAAATGTG
ACGAAGCCAGATTTTTAAGGATAATTATTTTGGGCAAATTTGGGCAAAAA
ACAGCTTAAAAGGTTTTTTGGGCCTGAATGGTTCAAGTGATTTTCGTATT
TGGGGAAATTCCTTTTTACCATTTTACATTATACAACACGAAAGCTTTAT
TTTTCCATTCTGAATTTTTGTACAATTATTGTCACTTTTTTCTTATTTTC
ATCTGATGTTAATCATTAGGTAGGTCCACTCAGCATGTTGCTTGTTCTGT
CCTGTATTGCTAAATTTTGGCAAAGTTTCATGCAGAGTGTTTAAGAATGT
TTCTATTTGTTTTCAGTTTTATCTTCCAAACAAGTTGCTGATGCAAAACC
TGAAAATGTAGCAGAGAATTTACCACAGACCTACAAATGTATGCCTTTCC
CTGAGCCTGACGAAAATGGTTACTTCAAAGTATTTGTATCTGCCTATGAT
ACACCAGACCGTGTGTGGATTCAACCTTGTACTACAGAAAGCTTGAAGCT
GGAAGCACTCAATGAGAAACTGAAACTTGTTTATGGTAACATGTCAAAAA
ACCAAGGGCAGCTAATGCAAGGTATCAACAATTAAACCTCATGTAAACTC
GCTATCCAGTATTAGATCATCTGATCCAGTTAACGCTCGTTTTCCTTCGA
TCAGACTTGGTTCACTCATGTTTTGCTCAAGCTACAGATATCTAAACAGA
CTGGTTTTCTGCTATATTTTCATCTTCTCCTCTGCTTGCGTATTTTACTA
GGAAAGAAAGGTGAACTGTGCGTGGCACAACATAAAGATGGGGAATGGTA
TCGAGCAACCATTGTATCCATCAATAGAGATCGAACTGCTGAAGTTCTTT
TCATCGATTATGGAAACGTTATCCTAGTCAACCTTGACGATGTCAAGGCT
ATCAAGTAATACTTTGTCTCTTGTCAGAGTAACAGTCATCTTATATTGTT
TATTGTCATTAAATTGACTGCCTTTTTCTTCTTTATCGTATTATTTCCTT
TGAATTCTAGTGATTATTTTTATACCAGACTGCAAGATGTGGCAACTTTT
TTGGAGTAAGTCTACAAACTGCTACAAATATTAATTTTGAATAATAACTT
TTTCTTACTAGACCAGAATACAAGGAACTTCCAGCTTGTGCTTCAGAATG
CTACTTGCCCATTCGTCCGAAAGGTAAAGTGAGTTTGCATTATTGCAAAT
TGGATACCCATTTGATATCACCAAAAATCGTTTTCAATTTTTTCCTAATT
TCAATTTCAAGGGTAAAGTTCTCCTGAAAGTCACTAAAAGAACTTTTTAC
CTTTTTTCAGGAAACCCATACTGGACACAAGTATCAGAAACCCACTTCAA
GAAACTGATACACTACGGTGGCTGGATAGCAATGTACGCCAACGTGCTTG
GGGAGAAAGATATAAATGGAAAGAAACTTAATGTTATCGAAGTTATACAT
CTTGAACAAGAAGTATGTAGAAATTAGATTTTGGAAAGTTTTTCTCAATA
TTAGTGACGGTGATTTTTTCCTTGTCTGCGTTCTCAGCTCTGTGTCATCA
TGTTGACGACCTGTCATTGCTATTGAGGTCTTTGCTGATCCATCATGTTT
ATCCTCTTTCCTGGAATCTGAATTATAACAAATTTGTTTCAATGACCAAT
ATTTTATCGTAAGTACCTCATTGATTGAGAGATTTTCTTTTTCTTTTTCA
TTTTTAGGAGGATATTTGTGATCACATGGTACAAAGCAACCACGCTGAAT
ATGATGATGGTAGGTTGATTTTCAAATTATGATTCATTTGTATTGAAATA
GAAAACTTAGTATTGGAGATCAGGTCTTTATTTTTTAAATTCAGGATGCT
TTTATCTTGCTTTACCAAGCCGGCCTCTGATTTATTGAGACTTTGGGCTA
ATGCCTTTGAAGACTTGAAAGTCAGTTTGAGGAAAGATCTCCTAGAACCG
TTTACCTTCTTTTTACTATGCGAACTATTCAGATGGTATCAAACTGTTTT
CCTCTTTCTTCCAGAGTTTAAAACGACAAAGAGCAAGTTTGCACAACAAC
AAAAACCTTCGGCAGATGTCGTGACACCTGAAATCCTTGAAATCCCTGAA
ATTCCCATTCTCGAAGACGTCATCCAGCCAGAATCTATCCATGTTGTTGA
AGAAGAAAATGTTATCCCTTCAACTGAAGATGCAATTGAATCTTCAATCG
AAATTATCGAAGAAATTATTCCACTGGATGTTGAAAGTAATGTTGAATCT
GCTCCTGAAATCGTTGAACCTGTAACTCGAAATTCTGAAGAAGTGTCAGC
GGAGAGAAACAACGTTGAGGAAGCAGAGGGAACGTTGTTATCTTCAAAGT
TGGATGACACGTTAGCATCCTCAGACACACTAGAATCAACTGATAGTGGT
ATTACTAAGGATTTGAAATCATCAGATTCTCAAGACCCACAAATCACCAC
AGCTGAACGTTCAATGCCAGACTTAGAGAATGTCGGTAAACAAGCATCTG
TTGATGATTCATTTGTGGACATTGATATGATGTCTGTTGATGGAGCTGTC
AAGGCTGTTGTCAGTGACCACATTCCGCCAGTGACTCCTCAAAAGGTCGG
AGATTCCAATGTTGATGAGAGTACCCTAGAAACGCCAGTATCCACTAATG
TTGAAACTGCACAAGCCACCAGTATTTTAGAGGACGAAGTTGACAAAAAA
GGACAATCTGATAACAATGAAGACGTTGTACAATCTGCAATTGACTCTAC
CGATGACCGTATTGAAGTTGATGTTCCGGTTAAGAAAGAAGAAGAAACAT
TAGTTGAAGAAAATTTACCGGTGGCCGAAGATGAAGATGAAGATGAAGAT
GAAGACGAAGAACACGCAGAATTACAACGATCTTTAGACGAAACGAGCAA
GAAGAATGTCTTTATAAATTCATCGATGGAAATGGCACGAGAGAATCTCA
TCCTTCTCGATAATGGTGATTCGTCGACCGATAACGACTCCTTCTACAGC
GCACGATCAGACGTCACGTTAACCGATACCGATAATTTGAGCTTCATGAC
GGCCACTGATCGTATGACCCCTTCCAACGAAATTTCTTTTAGTATTCCCG
ATTTAACCAATAGTAGCCCGTATGGGTCACAAACAGACTTGACTAAAAGT
AGATCTAAAAGTGACTTATCGACCAAAAGTAAATCTAGGAACAGTTTGGG
TGGGTCAAAATTTGAGATTCAATTTATTGATGAAAAGACACATAAAGTGA
TGTCGAGAGAGTCTCTGACTGCTTCTTTTGAAGCCTCTGGTAGTCATATG
AGTAAACAACAGAAACGATTATCAGCTCCAAGATCTCCTGGTAAAGAAAC
CCCAGTATGATGAGTGTTAGGTTTGTGGTAGACCATTACCATGCAATATT
AAGAATGTGGTAAATTGTTTACAATCCAATTTTAGGAGTGAATTTTTAAA
AGCAAACTTATATACCAATTTTAAACTTCTTTTATAACAGACAACTAGCG
AGCGATCTTATATGAGATAATATTTTGTGTTTATAATAGCACCATGATTT
TGAAGTATCTAATACTAATGTTGATTTGTAGTGTTTCTTAAATTTAACCT
TCAAGTACTGGACTCGGGTAAAGCTTCTGTCATTACAATAATTGTCTGAA
AACTCTCTCTAAATTTTCACTTTACTTTTTTGGCTCTATTCCAAAATTTT
GGTCCCGACAAACTCGATTGTAGTACCTCTTGGTTCTAGATCATAATGTT
TACGTAGATTTAAAAAAATACTTTTTCTTATTTCGTTCTTATGCAAATTA
TCTACTTTTGGTTCTTTTTATTGCAGTCTGTAAAATTCATTTAATCATAG
ATCCATTATTCAAGTGCCAAATTTCTAAGAAACTTTGTTCATATCGTGAA
TGGTGTACTATAGACGCTGATTTTCAACTGCAATTACATTTCCGAGAAAT
ATCTAAGTAAAGCAGATGATATATTTTTTATTCTCATTAAAAGTTCATGA
ATTAATGTTTTCTTATTCAGCGTATATTTATTCTTCAATTCTTATACTTA
CTCAATATCAAGAAAATATTGTTTTATTTTTACCCTAAAATCCTATGTAG
GTCCTTCCTTCTTAACCTTTTTTTCTTTTTGGAAAATTTAAAGAGCCCTT
CTATTTTTAAAAAACTGGGAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015363XLOC_015363Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027295-exon-sc0000613-1575043694:39359..39737TCONS_00027295-exon-sc0000613-1575043694:39359..39737Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1575043694:32818..32908TCONS_00027295-exon-sc0000613-1575043694:32818..32908Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1575043694:32041..32185TCONS_00027295-exon-sc0000613-1575043694:32041..32185Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1575043694:31647..31805TCONS_00027295-exon-sc0000613-1575043694:31647..31805Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1575043694:29967..30221TCONS_00027295-exon-sc0000613-1575043694:29967..30221Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1575043694:29633..29786TCONS_00027295-exon-sc0000613-1575043694:29633..29786Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1575043694:29365..29426TCONS_00027295-exon-sc0000613-1575043694:29365..29426Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1575043694:29076..29227TCONS_00027295-exon-sc0000613-1575043694:29076..29227Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1575043694:28779..28830TCONS_00027295-exon-sc0000613-1575043694:28779..28830Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1575043694:26366..28523TCONS_00027295-exon-sc0000613-1575043694:26366..28523Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1510915933:39359..39737TCONS_00027295-exon-sc0000613-1510915933:39359..39737Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1510915933:32818..32908TCONS_00027295-exon-sc0000613-1510915933:32818..32908Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1510915933:32041..32185TCONS_00027295-exon-sc0000613-1510915933:32041..32185Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1510915933:31647..31805TCONS_00027295-exon-sc0000613-1510915933:31647..31805Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1510915933:29967..30221TCONS_00027295-exon-sc0000613-1510915933:29967..30221Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1510915933:29633..29786TCONS_00027295-exon-sc0000613-1510915933:29633..29786Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1510915933:29365..29426TCONS_00027295-exon-sc0000613-1510915933:29365..29426Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1510915933:29076..29227TCONS_00027295-exon-sc0000613-1510915933:29076..29227Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1510915933:28779..28830TCONS_00027295-exon-sc0000613-1510915933:28779..28830Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1510915933:26366..28523TCONS_00027295-exon-sc0000613-1510915933:26366..28523Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1491911889:39359..39737TCONS_00027295-exon-sc0000613-1491911889:39359..39737Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1491911889:32818..32908TCONS_00027295-exon-sc0000613-1491911889:32818..32908Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1491911889:32041..32185TCONS_00027295-exon-sc0000613-1491911889:32041..32185Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1491911889:31647..31805TCONS_00027295-exon-sc0000613-1491911889:31647..31805Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1491911889:29967..30221TCONS_00027295-exon-sc0000613-1491911889:29967..30221Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1491911889:29633..29786TCONS_00027295-exon-sc0000613-1491911889:29633..29786Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1491911889:29365..29426TCONS_00027295-exon-sc0000613-1491911889:29365..29426Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1491911889:29076..29227TCONS_00027295-exon-sc0000613-1491911889:29076..29227Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1491911889:28779..28830TCONS_00027295-exon-sc0000613-1491911889:28779..28830Clytia hemisphaericaexon
TCONS_00027295-exon-sc0000613-1491911889:26366..28523TCONS_00027295-exon-sc0000613-1491911889:26366..28523Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000613supercontigsc0000613:26366..39737 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.48868	0.34571	1.10968	0.0127592	2.81622	22.5114	12.1691	10.5191	12.7464	22.8815	5.33958	8.78856	7.97518	6.33158	15.9666	15.4532	24.2762	19.3428	7.69412	16.0587	0.000731001	0.0816205	1.12646	0.267218	3.61295	0.25345	2.94775	0.800039	4.90692	0.167448
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027295 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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