TCONS_00027358 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027358
Unique NameTCONS_00027358
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length150

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027358 ID=TCONS_00027358|Name=TCONS_00027358|organism=Clytia hemisphaerica|type=transcript|length=150bp
ACTTGACTACTCCAGACTAAAAACTAGTTGATCTTTAATTTCCCATGGTC
TAGAGCTAAGAATTTCAAAGAGATTTTCTCTTTTGATTGTAAATGTTTTT
GCAACAGTCAGTTTAAAGTTACGTGCAATGCAACACGTTCacatcacaaa
Run BLAST on NCBI

transcript from alignment at sc0000616:38401..38550

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027358 ID=TCONS_00027358|Name=TCONS_00027358|organism=Clytia hemisphaerica|type=transcript|length=150bp|location=Sequence derived from alignment at sc0000616:38401..38550 (Clytia hemisphaerica)
tttgtgatgtGAACGTGTTGCATTGCACGTAACTTTAAACTGACTGTTGC
AAAAACATTTACAATCAAAAGAGAAAATCTCTTTGAAATTCTTAGCTCTA
GACCATGGGAAATTAAAGATCAACTAGTTTTTAGTCTGGAGTAGTCAAGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015393XLOC_015393Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027358-exon-sc0000616-1491911889:38401..38550TCONS_00027358-exon-sc0000616-1491911889:38401..38550Clytia hemisphaericaexon
TCONS_00027358-exon-sc0000616-1510915933:38401..38550TCONS_00027358-exon-sc0000616-1510915933:38401..38550Clytia hemisphaericaexon
TCONS_00027358-exon-sc0000616-1575043694:38401..38550TCONS_00027358-exon-sc0000616-1575043694:38401..38550Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000616supercontigsc0000616:38401..38550 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027358 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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