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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027386 ID=TCONS_00027386|Name=TCONS_00027386|organism=Clytia hemisphaerica|type=transcript|length=762bp
TTACTCTGTTATTTTAGATATCAATCAACGATCAATTGTCATTTGGCTAT
CATGATTCGTAAACAATTGTCACTGTGTTACTCCGAACTCAAAGTCGATG
CTACAAAGTAAATTCAGATATACTATGCAGAGATCAATCAGTAACCAAAT
ATCATGATTCTTTATTAACGACGAAAATATTGCTTCCCTCTAACACCATC
CAATAGTTTGAATGTCGACActacaaaaatcaaattaaGAAATTCAATCG
TCGACaatcaattttcaaagtttcttcGCCACTGTTTATGCTGATATGAT
TGGAAATATATACACGTTAACGTATCCTCAGCACTCTCTATCACGTTTCA
CGATTAGATTGACCGAtgcatttttaaaagtttttcgtCATGACCATTCG
TTATTGGAGTATTATGCTGTTATGTTTTTTGGTTCATTATACCTATCTTG
TTTCAATTTGCCTTGTTAATCGAAATACTGCTGCTGGAATTAATGAAATT
GGAATTGGACAATAATGATACTGTAGACTTTATTTCAACTAATGAGAgta
ttgtaaatttttaatgtcTTACAAAGAAGTGATGTTTGTACAATAgtaat
tttgttaatatttataAACAACTACATGATTATCTAAAACAACATTGttc
aaatcttttcaaattgtttcaaagCTCGTTAATTGACTCTATTGTGGCAA
AACTTGATTTTGGCACCAACTTTGCCTAAGCCACCTTCAAGAATAGTTGT
ATCGTTACTCTt Run BLAST on NCBI transcript from alignment at sc0000620:91797..93441- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027386 ID=TCONS_00027386|Name=TCONS_00027386|organism=Clytia hemisphaerica|type=transcript|length=1645bp|location=Sequence derived from alignment at sc0000620:91797..93441- (Clytia hemisphaerica)
TTACTCTGTTATTTTAGATATCAATCAACGATCAATTGTCATTTGGCTAT
CATGATTCGTAAACAATTGTCACTGTGTTACTCCGAACTCAAAGTCGATG
CTACAAAGTAAATTCAGGTAATTTAATTAAACCTTACAAACATTAAAAAC
CTGAAGGCTTTTCTATTTTCTTAAATAAGAAACTGTCACATTTGCCTACA
TTTGCTGAATGTCTCCATTCTCACCAAATAACTTAGAAAGTTTATATCAT
CAGCTTTTATTTTTATTTTTTGTTTTCTCTACTAGATTATATACGAACAA
CAGTAGTTGGTCAGCCTAAGCTGAGCATTCAAATAGGTAAAATTTTGAAA
ATGTTGGTAATTTGTTGATTGTTTATTGTTGTTTTAGTATCTGGTGTTAG
ATGTTTGTAGTGTCGAAAAACTCCATGGCTTTGCATCGTTTGTGCTTGGT
ATACCGTCACGTTCCTGTATTTGATATTGTTTGGTACAATATAATCGATC
ATTTCACTCATCATGGCTTGGATCTTTTAAACCATCGGCTCGTTTCTCGA
CACCTGAATACTGTAATAAGTTCATAAAAGTGATAGGTAAGCTAAAGGTC
TCTTTTTTGTCCATCTAAAAGGTTAACGCTGACACTTTCACATGCATTTA
TAAGTATATTTTACAAAGCAATCTTTTTGCAGTACGCAATTAATCGTGAA
TGATCTAAGTTTTAAAAAGTGAAATGACTTTGTTCATATTATCATCATTA
TTTACCTGTGTATGGGACTTTAATATCTTCATTGTTTTGTTGCAGATATA
CTATGCAGAGATCAATCAGTAACCAAATATCATGATTCTTTATTAACGAC
GAAAATATTGCTTCCCTCTAACACCATCCAATAGTTTGAATGTCGACACT
ACAAAAATCAAATTAAGGTACTATAAGTCTCCAAAATGACCTACATTAAA
AGTTTGCACAGTGGTCAATTGATATTTTGATGAATGCGAATATTAATGTC
AAAAAAAGTGAGAATCTACTGAAATGATTACTTCATACATTCTACCTATC
AATGAATTCAACTCTTGTTTTTAATTTGGAGAAAACACTATTAAATATCT
TGTAATTTTCTTTTTTCTCCAGAAATTCAATCGTCGACAATCAATTTTCA
AAGTTTCTTCGCCACTGTTTATGCTGATATGATTGGAAATATATACACGT
TAACGTATCCTCAGCACTCTCTATCACGTTTCACGATTAGATTGACCGAT
GCATTTTTAAAAGTTTTTCGTCATGACCATTCGTTATTGGAGTATTATGC
TGTTATGTTTTTTGGTTCATTATACCTATCTTGTTTCAATTTGCCTTGTT
AATCGAAATACTGCTGCTGGAATTAATGAAATTGGAATTGGACAATAATG
ATACTGTAGACTTTATTTCAACTAATGAGAGTATTGTAAATTTTTAATGT
CTTACAAAGAAGTGATGTTTGTACAATAGTAATTTTGTTAATATTTATAA
ACAACTACATGATTATCTAAAACAACATTGTTCAAATCTTTTCAAATTGT
TTCAAAGCTCGTTAATTGACTCTATTGTGGCAAAACTTGATTTTGGCACC
AACTTTGCCTAAGCCACCTTCAAGAATAGTTGTATCGTTACTCTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027386-exon-sc0000620-1575043694:93325..93441 | TCONS_00027386-exon-sc0000620-1575043694:93325..93441 | Clytia hemisphaerica | exon |
| TCONS_00027386-exon-sc0000620-1575043694:92525..92646 | TCONS_00027386-exon-sc0000620-1575043694:92525..92646 | Clytia hemisphaerica | exon |
| TCONS_00027386-exon-sc0000620-1575043694:91797..92319 | TCONS_00027386-exon-sc0000620-1575043694:91797..92319 | Clytia hemisphaerica | exon |
| TCONS_00027386-exon-sc0000620-1510915933:93325..93441 | TCONS_00027386-exon-sc0000620-1510915933:93325..93441 | Clytia hemisphaerica | exon |
| TCONS_00027386-exon-sc0000620-1510915933:92525..92646 | TCONS_00027386-exon-sc0000620-1510915933:92525..92646 | Clytia hemisphaerica | exon |
| TCONS_00027386-exon-sc0000620-1510915933:91797..92319 | TCONS_00027386-exon-sc0000620-1510915933:91797..92319 | Clytia hemisphaerica | exon |
| TCONS_00027386-exon-sc0000620-1491911889:93325..93441 | TCONS_00027386-exon-sc0000620-1491911889:93325..93441 | Clytia hemisphaerica | exon |
| TCONS_00027386-exon-sc0000620-1491911889:92525..92646 | TCONS_00027386-exon-sc0000620-1491911889:92525..92646 | Clytia hemisphaerica | exon |
| TCONS_00027386-exon-sc0000620-1491911889:91797..92319 | TCONS_00027386-exon-sc0000620-1491911889:91797..92319 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000620 | supercontig | sc0000620:91797..93441 - |
Blast
The following BLAST results are available for this feature:
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