TCONS_00027409 (transcript) - C. hemisphaerica

Overview
NameTCONS_00027409
Unique NameTCONS_00027409
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length140

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00027409 ID=TCONS_00027409|Name=TCONS_00027409|organism=Clytia hemisphaerica|type=transcript|length=140bp
AATGTcatttaagtctcttttgtatATAAAGatttaatttgagatttttg
tatTGATGAAATTAATTAACTGTCTTTTGTAAATTAGGAATGGTATCAAT
ATTTGTAGACATTAAATATACGGAAAATTATTTACTGGAA
Run BLAST on NCBI

transcript from alignment at sc0000620:200287..200426

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00027409 ID=TCONS_00027409|Name=TCONS_00027409|organism=Clytia hemisphaerica|type=transcript|length=140bp|location=Sequence derived from alignment at sc0000620:200287..200426 (Clytia hemisphaerica)
TTCCAGTAAATAATTTTCCGTATATTTAATGTCTACAAATATTGATACCA
TTCCTAATTTACAAAAGACAGTTAATTAATTTCATCAatacaaaaatctc
aaattaaatCTTTATatacaaaagagacttaaatgACATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_015432XLOC_015432Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00027409-exon-sc0000620-1491911889:200287..200426TCONS_00027409-exon-sc0000620-1491911889:200287..200426Clytia hemisphaericaexon
TCONS_00027409-exon-sc0000620-1510915933:200287..200426TCONS_00027409-exon-sc0000620-1510915933:200287..200426Clytia hemisphaericaexon
TCONS_00027409-exon-sc0000620-1575043694:200287..200426TCONS_00027409-exon-sc0000620-1575043694:200287..200426Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
sc0000620supercontigsc0000620:200287..200426 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00027409 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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