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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027477 ID=TCONS_00027477|Name=TCONS_00027477|organism=Clytia hemisphaerica|type=transcript|length=1443bp
gtggtttcaattttaatttaattcaattcaaaaatgatttatttgcctgc
ataatttaaactaaaatttaaaatttgtgaaaattacTAATATAATTAGG
TTGGGGAGCATGCCAAGCTCTGGCCATCCATATAGAGGTTACCCGACTAA
TCAATGGGGTGACTACCTGGTAGTATATGGTTGGGATTCTAATAATAGGA
TAGGGATTATTACACAACAACATAAAAATAACGATAGAGCAAAAAGGTAT
GCTGTTTAACAAATAGTactgtaaaatgaaaaataaaattctaacTTTAC
AGTAGCCGTGTAAAAAAACAATTgtggaatttaaaaattttaaatttaaa
aaaattacaaaatatcttgAATATATAACAGCCCTTATAAAATTACCCAT
AAAACGTCTTTTCAGAAAATACCGTCGTTTTACATAAGATTCCTCTTCCC
GCACTAATATTCCATTTGTCTATCGGAAAAAGACCTGGACAGGAGACCCT
TTGAGCTGTGAGGtagatttctgcctcaaaaaaattacagttgGAACCAA
AgttaaaaccaaatttcggaacttcCGTTTTTTTCTAATAAAGGGTAACC
AGtgaaataataacaaaatttgatcgGCTGTGTTGTCAACCgtcattagg
atctgggaaattccaAACCATGCTATTAATTTCGACATCagtatataaaa
gaagaaatcattGCAAGGATCTCCAGGCTAAAATAAGGCCAGGACTccat
atatttgaaaaatgagcttcggaaAGTTTGGCAGTTTCGCAACttaacac
aaaattttccaTACCTTTAGTAGAAAAAACTCAttccaatctcatgccgg
tTATTCCAGAAAGAATAGTAAAAAAATCCGGGAAAGGTCAGGAGAATCTT
AGAAAGTGAAGTGGAAACTTAAACAAAAATACGGTATTTTGAGTGGAACG
ACCACCTCGTTTTGTAGCCGTTACTAAGGCGATTAAGTCCCTTGAGTAAT
CAAGTGTTACTTGTATGAATCCTCTGGGAATCAACTACCATAGTgatatt
tgaaaacgaggtaagcgtttCTCGTGACCTAATTTCTGAAAAGGTCTTCA
AGCCAGACCTTTCATTTGTTAACTAGAACAGATACAAAAACTGAATGTAA
CCTAACTGAACCCCAACGGGAATTCCAAATTTACACTATAGATTTGTGTA
CTGAAGCAATCAGAAACCCTGTCTCATGGCCCCTATTGAATTTTAGATAA
ggataaaaaaagaggtcggATCCCACCggttctgtgacacaggggtgtac
tctaaggttccaaataaacggggggggggttggaaattgtgcttctaaaa
accccaaaataaggaaAATATAGACTAGAatctatttagagcaaaatacc
CTTCTCtttaacagctgaaaatattcttgaaaattaataaacg Run BLAST on NCBI transcript from alignment at sc0000628:76492..77934 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027477 ID=TCONS_00027477|Name=TCONS_00027477|organism=Clytia hemisphaerica|type=transcript|length=1443bp|location=Sequence derived from alignment at sc0000628:76492..77934 (Clytia hemisphaerica)
cgtttattaattttcaagaatattttcagctgttaaaGAGAAGggtattt
tgctctaaatagatTCTAGTCTATATTttccttattttggggtttttaga
agcacaatttccaaccccccccccgtttatttggaaccttagagtacacc
cctgtgtcacagaaccGGTGGGATccgacctctttttttatccTTATCTA
AAATTCAATAGGGGCCATGAGACAGGGTTTCTGATTGCTTCAGTACACAA
ATCTATAGTGTAAATTTGGAATTCCCGTTGGGGTTCAGTTAGGTTACATT
CAGTTTTTGTATCTGTTCTAGTTAACAAATGAAAGGTCTGGCTTGAAGAC
CTTTTCAGAAATTAGGTCACGAGaaacgcttacctcgttttcaaatatcA
CTATGGTAGTTGATTCCCAGAGGATTCATACAAGTAACACTTGATTACTC
AAGGGACTTAATCGCCTTAGTAACGGCTACAAAACGAGGTGGTCGTTCCA
CTCAAAATACCGTATTTTTGTTTAAGTTTCCACTTCACTTTCTAAGATTC
TCCTGACCTTTCCCGGATTTTTTTACTATTCTTTCTGGAATAaccggcat
gagattggaaTGAGTTTTTTCTACTAAAGGTAtggaaaattttgtgttaa
GTTGCGAAACTGCCAAACTttccgaagctcatttttcaaatatatggAGT
CCTGGCCTTATTTTAGCCTGGAGATCCTTGCaatgatttcttcttttata
tactGATGTCGAAATTAATAGCATGGTTtggaatttcccagatcctaatg
acGGTTGACAACACAGCcgatcaaattttgttattatttcaCTGGTTACC
CTTTATTAGAAAAAAACGgaagttccgaaatttggttttaacTTTGGTTC
caactgtaatttttttgaggcagaaatctaCCTCACAGCTCAAAGGGTCT
CCTGTCCAGGTCTTTTTCCGATAGACAAATGGAATATTAGTGCGGGAAGA
GGAATCTTATGTAAAACGACGGTATTTTCTGAAAAGACGTTTTATGGGTA
ATTTTATAAGGGCTGTTATATATTcaagatattttgtaatttttttaaat
ttaaaatttttaaattccacAATTGTTTTTTTACACGGCTACTGTAAAgt
tagaattttatttttcattttacagtACTATTTGTTAAACAGCATACCTT
TTTGCTCTATCGTTATTTTTATGTTGTTGTGTAATAATCCCTATCCTATT
ATTAGAATCCCAACCATATACTACCAGGTAGTCACCCCATTGATTAGTCG
GGTAACCTCTATATGGATGGCCAGAGCTTGGCATGCTCCCCAACCTAATT
ATATTAgtaattttcacaaattttaaattttagtttaaattatgcaggca
aataaatcatttttgaattgaattaaattaaaattgaaaccac
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027477-exon-sc0000628-1491911889:76492..77934 | TCONS_00027477-exon-sc0000628-1491911889:76492..77934 | Clytia hemisphaerica | exon |
| TCONS_00027477-exon-sc0000628-1510915933:76492..77934 | TCONS_00027477-exon-sc0000628-1510915933:76492..77934 | Clytia hemisphaerica | exon |
| TCONS_00027477-exon-sc0000628-1575043694:76492..77934 | TCONS_00027477-exon-sc0000628-1575043694:76492..77934 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000628 | supercontig | sc0000628:76492..77934 . |
Blast
The following BLAST results are available for this feature:
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