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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027482 ID=TCONS_00027482|Name=TCONS_00027482|organism=Clytia hemisphaerica|type=transcript|length=602bp
aaaagtaaaagtaaaggTGATAGAGTTACTGTTGTTCTCTTACTTGCAAT
CGCACATGGAATGGAAAGTAGACCAGCAATAGACGGTGATATAAAACCGT
CGCCGGCAATTCAGACAGTAGAAGTGTATTATACAGAACCAAAAGGATGT
TATGacgaaaattggaaattttatttACCAGGAGAAGTTATGAGTAAACA
TTATGATGAGAAAACAAATAGTTGTAGTGGTGTGAAATGCGGAGCCGACG
GTGTTGCTTATGCTTGGGATGGTGTCAATTGCAAAGATAAGAAAATTGTC
gatatgttttaattttttgaaatatttaggtTCTCTGGAAACTGcttatt
ttttgtccattttatcaTAGCTAAGAATTTCATTATTGTAAATAGTAATT
TATTGAAGTTTCTCTGTAGTTTTTTTGTTGTGTTATCCCGTCTGTAGTAA
AAGGTTGCTTAGGGTAGCAGTTTTTAATGAGAAATTTTGCTTAAGTGGTC
TTCCAACAGTAAGAATAAAACGTTCTCAttataaagttttcttttgacGA
TTTCTCACAGAATGTTTTAGAGAAATACTGCTGAATATCAAAAGATGATG
TT Run BLAST on NCBI transcript from alignment at sc0000630:167526..168534+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027482 ID=TCONS_00027482|Name=TCONS_00027482|organism=Clytia hemisphaerica|type=transcript|length=1009bp|location=Sequence derived from alignment at sc0000630:167526..168534+ (Clytia hemisphaerica)
aaaagtaaaagtaaaggTGATAGAGGTGACTAATTTGAAAATTCGGTCGG
GAGAAAATAAGTGATAATAAAATCCTGTCGAGGAAATGTGACTGAAGTTT
GGTTGggagaattaaaaaatgttggtcGCCTTTTTTCCACGATAACCACG
GTAACAAGCAGCACAATAAAGCAATGTAACatacaggttttttttttata
agaacatccaaaattttgaagccttttttagctttaagcctaaaaatatt
cttaacatattcttattatccccatttttttagtattcttgtccattttc
ttaaggaattgggtgttttagagtccacaaaaccttaaaatgttcttaac
attttgcccatcgaagccttatgtttttatatagtttccATTAACCATCC
ATCATCtaaaaaccataaaactctTTTTTTAGTTACTGTTGTTCTCTTAC
TTGCAATCGCACATGGAATGGAAAGTAGACCAGCAATAGACGGTGATATA
AAACCGTCGCCGGCAATTCAGACAGTAGAAGTGTATTATACAGAACCAAA
AGGATGTTATGacgaaaattggaaattttatttACCAGGAGAAGTTATGA
GTAAACATTATGATGAGAAAACAAATAGTTGTAGTGGTGTGAAATGCGGA
GCCGACGGTGTTGCTTATGCTTGGGATGGTGTCAATTGCAAAGATAAGAA
AATTGTCgatatgttttaattttttgaaatatttaggtTCTCTGGAAACT
GcttattttttgtccattttatcaTAGCTAAGAATTTCATTATTGTAAAT
AGTAATTTATTGAAGTTTCTCTGTAGTTTTTTTGTTGTGTTATCCCGTCT
GTAGTAAAAGGTTGCTTAGGGTAGCAGTTTTTAATGAGAAATTTTGCTTA
AGTGGTCTTCCAACAGTAAGAATAAAACGTTCTCAttataaagttttctt
ttgacGATTTCTCACAGAATGTTTTAGAGAAATACTGCTGAATATCAAAA
GATGATGTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027482-exon-sc0000630-1491911889:167526..167550 | TCONS_00027482-exon-sc0000630-1491911889:167526..167550 | Clytia hemisphaerica | exon |
| TCONS_00027482-exon-sc0000630-1510915933:167526..167550 | TCONS_00027482-exon-sc0000630-1510915933:167526..167550 | Clytia hemisphaerica | exon |
| TCONS_00027482-exon-sc0000630-1575043694:167526..167550 | TCONS_00027482-exon-sc0000630-1575043694:167526..167550 | Clytia hemisphaerica | exon |
| TCONS_00027482-exon-sc0000630-1491911889:167958..168534 | TCONS_00027482-exon-sc0000630-1491911889:167958..168534 | Clytia hemisphaerica | exon |
| TCONS_00027482-exon-sc0000630-1510915933:167958..168534 | TCONS_00027482-exon-sc0000630-1510915933:167958..168534 | Clytia hemisphaerica | exon |
| TCONS_00027482-exon-sc0000630-1575043694:167958..168534 | TCONS_00027482-exon-sc0000630-1575043694:167958..168534 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000630 | supercontig | sc0000630:167526..168534 + |
Blast
The following BLAST results are available for this feature:
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