|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00027568 ID=TCONS_00027568|Name=TCONS_00027568|organism=Clytia hemisphaerica|type=transcript|length=1918bp
GAGAAGATTTGGATTTGATTAATTGGCATAAAAAATAGAgaagatgaaaa
tgaagggACGAAAGCGATCGCTGTAGACACAGACTCACCTTTAGAAAAAG
GGAATGATGGATGGACGGCAAGCTTACATCCTATAGAGAGCATAAAGCAG
GCACAAGAAGATGATGTTGGTAAGGCACCAGATCTACCAAAACCAGAGAA
GATAGAAGAggataatgatgatgatgacagCCTGGAAACCACAGACAATG
AGAGCGAGGTAGCTGAAGTTGGAGCTAACAGAGTACACATAAGaaatcgg
aTGTCAATTCGGGAATTGGAAACTAGCGAACATGCTAAACACCGATATGC
ATTTTTGAGGGCGTTTGACGAAATCAAGAAGCTTTCTCATGATCATCCTA
CCTACGGGGCTGACTCCTTTTGGAGCATTGCATCAATCAATGGCCAGCCG
TTCACCTCCAAGAGATCGAAACCCCCTNTTTTGGAGCATTGCATCAATCA
ATGGCCAGCCGTTCACCTACAAGAGATCGAAACCCCCCCAATGCAAACAT
GGAAAAATGTGGAGAGGACACAGCCAGCATGAAAACGTTCTTTTTCTCCC
TTGGTACCGCGCTTATCTCTTGCGATTGGAAGATGCTTTGGTACGACATG
CTCCAGTCGACAATCTTAAAGTAGCGTTGCATTATTGGGATGAAACTTCA
CCAGAATCTTTGGCTAATGGTCTCCCACGCCTCTTAACAGATGagtttgt
tgaaattgataaaaatggaAACACCATTCCCAACCCTCTCTTAGGATTTA
CTCTACCAGAAGCAATACCTCTAAATAAAGCAACACAAAAATACACAAAA
GCAGCTCAATACACAACCTGCCGATATCCCTTCTCTGGCCTGATGAATCC
TCGAGACCCAACCAAATACACCGCAAATGCTGAGTTCCAGAACCATTATC
TTAACCTCATTCTTCGTGATCCAAAAGAGTACCTGAATCAAAATATCATC
CACTCTTTAAATGATTTGAAGGCTCCACTTGTACCCATCAAAGATATATA
CAAAGAATGCTTGGATATTGAAGACTACAACAAGTTTTCAAATATCTCGT
CAGCAGGATGCGGGAACATCTCTCTCGAGCACGCCAGTATTAGTATGCTT
CACACATTAGGTGGAAATAGTGAAGACAACTCTGTTCAACGCGAGTTGAT
AGCTGGCTCCCATGGTGATTTAGGATCAAAAGAAATGGCGGCTTTTgatc
ctttatttttcttgcaTATGTCAAATGTTGATCGTATGTTTTGGATTTGG
CAAGAGAAGTACCATCATACCACATCAACAATAGTCACGAATAAGAAAGG
TAGGGTCGTTTCAAAGCCTTTTAAGATAAAGGCCAGTGGTAACGGAATCA
AACCCAATCAAGGTCAAGGACCTTCCCCATCGCAACAGGGTGAAGAAATT
TTGGGTATGAGTACTTCACTACATCCATTTAAATTTGGAGCTCTCAAACA
ACCCACGGTTACCAATGACTTGATCGATATCAAAGGGGAATTGCATTATA
CATACACAAGAGGCTCATTTGATAAGAAAGACCCCTCACGTTAGGTGATT
TTCAAGGCTGTACCAAACCCCCTCAAGAAAAAGAGAGGGCATTCACATTT
TGTCGACAAACATTTTATTGGAACAATCAGTAATAGCTTTTCTAATTGAG
ctaattaatttcaatttttcttactTATTTTTAAACCTATTAAACGTCTA
TTTGTGTAATTTTGTAACCTACTATTAGCTTTTTGTTGAAACCCATATTT
AATTCATGATAGCACAATACAAAATCATTTGTGATTCactcttttttaat
aagaacaattttatagtGATGACTAGGCTTAAAATTACCGAAAGATAAGA
ATAATGCCGAGCCCGGAA Run BLAST on NCBI protein sequence of TCONS_00027568-protein >TCONS_00027568-protein ID=TCONS_00027568-protein|Name=TCONS_00027568-protein|organism=Clytia hemisphaerica|type=polypeptide|length=401bp
MIILPTGLTPFGALHQSMASRSPPRDRNPXFWSIASINGQPFTYKRSKPP
QCKHGKMWRGHSQHENVLFLPWYRAYLLRLEDALVRHAPVDNLKVALHYW
DETSPESLANGLPRLLTDEFVEIDKNGNTIPNPLLGFTLPEAIPLNKATQ
KYTKAAQYTTCRYPFSGLMNPRDPTKYTANAEFQNHYLNLILRDPKEYLN
QNIIHSLNDLKAPLVPIKDIYKECLDIEDYNKFSNISSAGCGNISLEHAS
ISMLHTLGGNSEDNSVQRELIAGSHGDLGSKEMAAFDPLFFLHMSNVDRM
FWIWQEKYHHTTSTIVTNKKGRVVSKPFKIKASGNGIKPNQGQGPSPSQQ
GEEILGMSTSLHPFKFGALKQPTVTNDLIDIKGELHYTYTRGSFDKKDPS
R Run BLAST on NCBI transcript from alignment at sc0000635:55896..68196+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00027568 ID=TCONS_00027568|Name=TCONS_00027568|organism=Clytia hemisphaerica|type=transcript|length=12301bp|location=Sequence derived from alignment at sc0000635:55896..68196+ (Clytia hemisphaerica)
GAGAAGATTTGGATTTGATTAATTGGCATAAAAAATAGAGTAAGTGTGAG
AGATTAATCTACTTTTAACTTTAAAGTCTAGATAAGATCACCTTTGCCAT
AGAAAACCGAGCGACTGCATACCGAATTCATCGGGAAACAAATTCTTGTT
CCTGCCTTGGAAGGAAGGAGCTATATTTTTGTTTATCCCTATTAATATTa
attaatattaatattattATTACTATTTCATTAATATTagttattgaaaa
attttgttttctattgAAATCTTCACCACACTTTAATCTTGACAAAGGGC
CTTTGAATTTGCTAAAAAATGACCATTTTACAGATCAAACGtatttggtc
tgtaaaataccaccCATACAAGTtatgtatttgaaaatttgcacacaAAT
GTGTTTTGTTATGATGTATGTTTTTGCAAAATTCCAAGTTGATTACATTA
ACGTTTCTATTGAAAAATTGtagttttgatgattttcgGACATTTTCTAT
TCTTGTCTGTAAAATGCACCAGTGTTCAAGAGAACCTTGTTCCTTCGata
ttgaaaatgttaaaaagaaaattgtaagAAAGAAGGATAATGTTGGCTAC
GGGCATAAGCTAcacgttgaccgcaaaaattccaaaattcgaGAGTTGAC
GGTTGATAACATTAGACAGGGTGGCCAGCGATACtggaaatacttgaaaa
tacttgaatatactggaaaaaaatattggtacttgattatactggagttt
ttgaaaaaatgcccaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNgagtttttgaaaaaatgcccat
ttttccagtatatacttgaaaatgataaattggaatacttgaaaatactt
gaatttcttttttcaatcaaatcttctagtgagagctacaatgttcttcg
tgtgcacagacttgttaaaagcaaactaacttttttaaatgttcaATTAG
GTCTATAAGATCACTAAAACaagtggtgagaaaaattttgaccattttgc
tggtcctcatgtgacgtcatcacttttacTGGggcttaaaaatgaaagtg
aaaattagaagctcatatatggctcaaatgaaagatatttatcaaaggat
tccaaaaaatatcacaacatatacctgaaaatcaatatttgagaagctat
gaaggaaaatagctcaaaaaatgacgtcatcgatgacgtcatcggcaatt
aaaaaatcgtcgaaatcgaaaaatttttgtttcatttgaaaGAGGACCTG
CttgggaacaaaaaatattactactgAAAACCTTGAATTTCACTTGATAG
GAAATTATTCTGTGAAATGCGTttgacttgactctcaagctttTTAAGAT
TCCTGGGCGTGCCCGAAGCTAACCTTTCACAggcaaatttaatgaattac
aaaTTTTCTGACAGGGGCTTTTAACGAgtaattcagatttttttgtagta
atattttttgttcactagaTGGTCCTCTTTCGAACGAAACaaaaatcttt
cgatttcgacgatttttttactgtcgatgacgtcatcgatgacgtcattt
ttcaagctattttccttcatagcttctcaaatattgattttcaggtatat
gttgtgatattttttggaatccttggataaatatctttcatttgagccat
aNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTtcggacccaaccatggtgggtcctcc
TGATAACAATGTATTGTACCCTATTTGTAAGGTTAGACATTCTTGGTTGG
TCTTATTCACTTAACCTATTTGATatggattttttaaaaaaaatgaacct
TATATGGgcatacaaaaaatgaaaaaaagtaaaagcagaATCTTAGATAT
TCTTCAGCTCAAGTTATTTACTGCAAGATAACCCTCATTGAGAATTTCGA
AAATCTAGCCTTTGGAgcatacaaaaaatgaaaaaaagtaaaagcagaAT
CTTAGATATTCTTCAGCTCAAGTTATTAACTGCAAGATAACCCTcattga
gaatttcaaaaatctagccTTTAGAGCATGTATTGAAAGAATATATTCAA
TGTGCACATTTCCACTCTTTTTCTGCTAAATGGATATCTGATATTTGCAA
ATCAAGCTACTGCTGAAAAATGGAGCCCATGGTAAATTAATTGTGCAGGC
TAATGCTAaagcggtcagggaaaacctggaaaaagggctatttttagaaa
aagtcaaaaacatggaaaagtcagggaacttttgtaaaattctgcaaaag
tcagggaaaagtcaGGAAATTTCTTTCTAGACCCTTGAAATTGATGGTTT
TAGCAAATCTTTGAatccctatttttcaaaattttctttgtcggACCCAA
CCATGATGGGTCCTCCAAGTAATCATGAAACCCACTAATATCAGGACCTA
TCTAAaattgttgttgttatttttgaaaagtttgaaaggtAGTGACATGA
AAAGTGCTACATGAAAAGTGCTCCCCAATTTTCTATGTTAAAAACTCTTG
CTAGAAAATAAACCTTATGGGAGCAGTGAGCCATAGGGAAATGATTCTAG
AAATAAGAagttgaaaattgggaaaatgtcaatttttcagcaaagttttt
gatttgactgaattgacTAAACTCTTAATTACACAGTTTCTTCGTCTGCT
CGAACTGGAAATGTCTTAAAAGTCTTGAAGTTtgatatttgaagaaaata
tttctgaTAATCTCTAGAAAACATTCTGGAAATATcggaaaatttcttcc
tactaCTTAGaattgcaaaagaaattctatcCATTTCGCTCGCAACCAAA
TCTTCTGATTTGACAACCTTGCTGCGTAAGCTGTTAGTAATAAAATTCTA
GAAACTAGACAACCGCTGTTGTACGCCATGGTGTCATAAATCCACTAGTA
TCTAGAGCACATTTTTATCTGTTgtttaatttgagaaaatgtcaaaataa
ttcTGGCATCAGTGACATTATTTTGTGCACACAATTTTGTcataatattt
ttaagaaagggaAGCCCATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNATAAAATTTCTGGCAAATTGAGGATCCGGATATCCCTATTCTAAC
GAAGCACCATACGTAAAGTTCAAAATATACTTGAATGTACTTGAATTTTG
CACCTCCATATGTACTTGAAAATAGCAAAGATAtacttgaaaataatcaa
aaatgctCCAAAAAGTACTTGAATATACTTGATTTTCAATGACTAAAATC
GCTGGCCACCCTGTTAGAGGTAAAGGGACCAAATGATGTCACAGTTTTGG
GAAAACTTCAAAATgtgatatctcgagtttgaacaGGAGTTGAGAGATCG
TTGACTCCTCATTGGATCTAAAATTCTatggggaataagatgggaggggt
GGGAAGCTTGAAAAtgacttttaaatttggctgaattttcaggctttttt
agttgatgacgtcaccaaaacGGAAAAATGAGATAACTaaagattggaaa
ggagttaggaAATGATAGACCCCTCATTCAATCGGAAATCGTTTTTAACC
ATTTCAAGTGGTAATGTTTTGTTCTTTGGGCTtaaaaatcaaatcttttt
accttccccaccatccaaagggcttatgatacaatcagcttatctactcc
tcggcgggtgcgacgccagTGACGGCTAGTATTAATCTATATTTTCAAGA
CAGATTCTACATTTTTTATTACTTACTTTTTATTACTGGTTACTCCCATA
CTTGGTAAAGTAGCTGAAATTGCTGCTTGAAAAGTCAATTTGTCTATCTC
CGACAGTGAAAGATACCTATCGGTAAACACACGCAGGAAGTTTAAGGTCG
TTACATTTTCATAACCTGTATTAATACTATTACTAATAATCGTATAACGT
AGGTTTGAAAACTAATGACTACTCTCATAGGAATTCATACACTATCACTT
TCAGAGAGAAATTTCCAAGAATTTGTGTTGGAACGATTGAAAactaaatt
tgattttattctaTTCAAGGTTCTATAAATTGTGCATTCTCCTTTTTAAA
CGACGTGAAATGATAATGCATTATTCGATTATAACTACTTGCTATCAAAA
GTTTATCATGAGAGATAAGAAGTTTTTAGTCAGTGGGAGACAAAATACCA
AAGGATTTTCAATAATTCTCCTTGTTTATGGAGAAAAGACAAGAGTACAA
AAGATAGTATAGATATTATAAGGGGGATGACAACAGAAATTTGAAGTAAA
ATCATAAACACAGATGGACAGGAAGCAAGTGGACAAAGAAGACTTATCGT
CGATAGCTAAAGTGATGCCAAGGCCTAGTTGGCCTAGATTGGATTCTTCA
GAGCAGGTCAGCTGTTCGAGAGCTTTTTATAGTCTTGTGAAAATTAATGC
Atctttagtagggggaaatttgttagggttcgtttttttgaggtcgctcg
acttttttagtcaaagcacttgttatacatttttggaaagctaaagggta
ggggaatcaaaataacttgggtgtcaatttttttcggacactttgttgtg
attttcggacaaatacgacggtctaagctcaatatctcgagttaggtact
gaaatcacatATAATcacaatatatcactaatcttaattttttgagagct
ttccaaaaatatacaacaggtcaccgttttctcaagctaaaattttcatt
aacttttcaccctatgattgtGGCCTgggaccgtcgtatttgtccgaaaa
tcacaccatagTGTCcgagaaaaaaattggcacccaagttattttgattg
acctaccccttagctttccaaaaatgtataacaagtactaaaaaaatcga
gcgattttacaaatttccccctactacttTTAGAAGAGGATTTTTTATCA
TGAGAGGATTTTGAAGGCATTTGTCTCTAGCCTAGATTTTCAAAACATGT
TCATaagcttttataaaaagttgtttttctgTTCTCCTAATAGTTGGGGA
GCTGGGGAAGGTCAACTATGACAGTCGTAGCAGCATGTGAAATATATATC
ATCATATAGCACTCTGTCTGATAGTTTCCAAATTTACTTGTTTGCTGTCC
GAAGTTTTCTTGTTGGTATCGATACTTTTACATGGATGTCCAATCGCTCC
TTTTTCTAAGTGAAAATTTCCGTTTTTGTCCTTATaggaagatgaaaatg
aagggACGAAAGCGATCGCTGTAGACACAGACTCACCTTTAGAAAAAGGG
AATGATGGATGGACGGCAAGCTTACATCCTATAGAGAGCATAAAGCAGGC
ACAAGAAGATGTAAGTTAGACACTTTACattcctgaaaatatttgggaAG
AGATTTTCGCGGGAAGGAAACTTTACGAAATGTTTCCATTTTGCGATAAG
TAATggagtttttcaaaatatttctcgaGAGAATTTTAATCTCGTTCTTG
TGCTTAAATTATCAGGATGTTGGTAAGGCACCAGATCTACCAAAACCAGA
GAAGATAGAAGAggataatgatgatgatgacagCCTGGAAACCACAGACA
ATGAGGTAAGTtgattttaaaaaaggggtcttgatatattataaaatata
ttgcCGGTTGTGGTTTTTTATACTTACtcttaggttccaaataaacggcc
ccccccccgcttgttaatttttcgaaaattttccaaccccccggacctta
ttaggaccccccgtttattaatctctaatcagctgtcaaagagaaggccc
cttaaattgctctaaatagcctgattttagcctatttgtgccttattttt
gggtttcagaagtacaatttccaacccccccggcaattaggtccccccgt
ttattaaaatctagaaaattttccaaccccccggaccttattaggacccc
ccgtcTATTCATCCCAaatcagctgtcaaagagaaggccccttaaaTTGC
TCTAagtagcctgattttagcctatttgtgccttatttttgggtttcaga
agtacaatttccaccccccccggcaattagggccccccgtttattaaaat
ctagaaaatttttcaacccccccacacccccccccccccccctcttattc
catcccccccccccctttttcccccccccccctttttcccccccccccct
ttttcccccccccccctttttcccccccccccctttttcccccccccccc
tttttcccccccccccctttttcccccccccccctttttccccccccccc
ctttttcccccccccccctttttcccccccccccctttttcccccccccc
cctttttcccccccccccctttttcccccccccccctttttccccccccc
ccctttttcccccccccccctttttcccccccccccctttttcccccccc
cccctttttcccccccccccctttttcccccccccccctttttccccccc
ccccctttttcccccccccccctttttcccccccccccctttttcccccc
cccccctttttcccccccccccctttttcccccccccccctttttccccc
ccccccctttttcccccccccccctttttcccccccccccctttttcccc
cccccccctttttcccccccccccctttttcccccccccccctttttccc
ccccccccctttttcccccccccccctttttcccccccccccctttttcc
cccccccccctttttcccccccccccctttttccaacccccccccccccc
gtttattcgaacgcccccgtttatttggaacctaagagtactaaGGGAAC
CTAAAAAACACCAATTTATATCTCTTCGGCTTTTCTCTCTCTTGTATTGC
CAGTTGCCACCTCattatagatcttatcggagtttttgatttttctaaaa
aagcgatgcattgtgggattgtttcaagagtattacaatagaattccctc
gagggattcctaagagatttccattgtaatactcccgaaacaatcccaca
atgcatcgcttttttagaaaaatcaaaatctccgataaggtctattacgg
agaaatggaaaattaaaaagattatTTTCTACGTCGAGCactctaattta
ttttaaatcttTGATCAGGATTTTCGTAACTTCCTCAGATATAAAGTTAC
AGTTAAAATGgctaaaatggccaaaaatgaCCAAGCATAGTGGAAACCTA
ATTTATAGGACTGTAACTTTTTTATCAGAGGAAAAATCAGAGCATAGAGC
GGACAAATTTGTatgtaaaataaaatcctcataattttTGCCAACTTTTA
TGACTTGTATACTTtatatttcaatctcaaaaacctTTTCACTCATCTtc
tattgattgaacagagaattttaatcttatttcaatAACTTTAAGCCTAG
TTTAGATAACGAGCTTTGAGGGTTTTActttatttaaatttaaaaatttg
tccgctttttttgggacacgcTGTTTAGTAATAATGATTGCTGAGAAGAT
GATATAAAAAGATACTCATGAGACAGACTTCAGTACGAACTTGTTTATTC
TTATTTAGAGCGAGGTAGCTGAAGTTGGAGCTAACAGAGTACACATAAGG
TAATTGGCTGTAAAGCTACTGTTATTTAGATTTCTTGAATTTCGATTAGT
TGAAATCATAGAAACGGCTggggttgtaggggttcgaaataccgaaAGAC
ACCGTCACACTGGTTTGTAGaggttataatttttttttttttttttttaa
aaaaaattttttttaaaaaaaaaaaaaggggggggttgtaggggttcgaa
ataccgaaAAACCCCGTCCCCCTGgtttttaaggttttaaaatttttttt
ttttttttttttttttttttgaatatagATTGATATTAGtagtaattaaa
tattaaattaaaacgttacaatatataaattgcttaaaatacgTACAGCT
AGGAaattcaaagttaaataaaaaattgaaatcacgacacaaacaaaact
gaaaactgaatcGAAATACTGTCGAAGTAGCACAACCTAGCGGGTCATGC
CAAACTCAAAAGCATAAGCAAAAGCAATGGAAAAtacggtgaaaaaatta
agtactaaaatctatgaaaagctaagatttcaaaatattgttaaaattta
ataaatcaatttcatcaaacctAAGGTTTGGTTTTAGTGTTCGTGTACTG
ATCTCGTTAAAGCAAACGAAATTTTAGTTCTAATCCAATTTTTGGTTTGA
GACGCGTGAGAATCTGTCTTATCAGCTAGTAGATTAGCTAGCGCTCCAAA
GAAGTGCTCAGCCTCTACACCCATTCCACNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATCAACTTTGAT
AATTCGTTCGTTgtagtttctctttttttcccgtTCGTTTGACGCAAAAG
CGCTTTTGAGACTTTGGGCTGTGTATCTCAGAGCATAGGCGTCGAATACC
TTTACATAAAAAAATGCTCGTTGTCCACGAACCCAAAAACCTCGCTCCAG
CACTGATGTCAGCTCTCGCGTTGTCAGTCGTAATCGCACCTTTGTTTAAA
TTCAGAGGTTTAAATACGGGTCAAGATAAACATTTTACAAGAActtttgt
cattggattggttttttattatgtttttctaaagaacgcgtcatttctat
tgttttgaataaccaattatgtgagcatcttataaatacTTCAACACAAT
TGGTAAATACTGGAATATTGACAAAAATAAggccgtcaccgtctgatttt
aaaatactgttttcccgtctcttttttcatcaaatcccTTAACCCGGTCT
agaaaagggccaatcccgtcacaccgtaaaaatACAAACCCGCCTCTGTA
GTCTGTATTTATAGAAGACTTTTACTGCGGTCTGAAAAATATTAATCATA
GTAAGTGGTCATAAAGTAACTACTAGAAGTGGGTAGAGGATTTTAGGTGG
GGGtccgaaaaatattttccacccCAAGGGGGGGAGGAGATCTGAAAATC
TGAGAGATCtagcttaaagggacataacagtaatTTGTAAACAGACTGTA
TGCagcagatacaaaatcaaaacaaatgtcacatgtcaaaataaaaaatc
aaaccaaatatggctaattttgattgttcaattgttttacaagtttgttt
tggacacgtgattttaattgttctctttaatgacacgtggtttgcgcaat
gtttacattttactactgtaatgtccctttaaaaccTTGTCTTTATTTCA
AGAATTTCACGGTTCGCACTAACGACATGTAGGGCCGAGGGGGGGGCATT
GTCCTTGCACTATCCGCACTGtagtgatttttcatttttatcttttagtG
TAGGCTTTTGAGAATGTTTTCAGAATAATCAGTTCAAAACAGAGTAGTTT
TAACTAAATAAAAGGGTCGAAAACTCAAACTCAAACTTATTGCTCCTCAG
TTATAACCGCgtgacaaaaataccatttccCAAAAAGGTAGAACACACAA
AATTCatagaatgaaaataaattgtGAAGCTCTGGAACAAGTACAGTGAG
GAAACAATGTTTTGAAACATCCTCCACCCCATCTGGAAGATACTTTATGA
CCACTCCCTAAAAAATATAgcctcaaaattttagaaaaatggagATCAAC
TCAACATACAAAAAATGCTCTGGTGCACCTAGAAAATAATGTCTGATACA
GTTTTTTGATACtgtctgtgagtgaaccctgGTCTACAGAAGTTCGAAAT
CTTCTTTTGAATTATATTAATAATTAGCTTGCTTCTTATTTTCCTTGGAC
CAGGAACGCAGGAACAGTGCTTGTATAGAGTTGTTATATAAAATAGATAA
ATTGCCATGGTAGACTGGTTTGGAAATGCAGAGCCCAATGCAAGCTTAAG
TTGCAACGAAATACAACGACACGctttataaaaactaaaaacaagGCTTA
TTTATACAGGGCTTTTTGGAAATGTTAAAAGATAGCTGCGAAATTTTCTG
GGTTTATATCGGGGGAGTCGgcgttttttaaagcaaaagtgGCTTTGTCA
ATTCTTATGCTGttaatatttttcagaaatcggaTGTCAATTCGGGAATT
GGAAACTAGCGAACATGCTAAACACCGATATGCATTTTTGAGGGCGTTTG
ACGAAATCAAGAAGCTTTCTCATGATCATCCTACCTACGGGGCTGACTCC
TTTTGGAGCATTGCATCAATCAATGGCCAGCCGTTCACCTCCAAGAGATC
GAAACCCCCTNTTTTGGAGCATTGCATCAATCAATGGCCAGCCGTTCACC
TACAAGAGATCGAAACCCCCCCAATGCAAACATGGAAAAATGTGGAGAGG
ACACAGCCAGCATGAAAACGTTCTTTTTCTCCCTTGGTACCGCGCTTATC
TCTTGCGATTGGAAGATGCTTTGGTACGACATGCTCCAGTCGACAATCTT
AAAGTAGCGTTGCATTATTGGGATGAAACTTCACCAGAATCTTTGGCTAA
TGGTCTCCCACGCCTCTTAACAGATGagtttgttgaaattgataaaaatg
gaAACACCATTCCCAACCCTCTCTTAGGATTTACTCTACCAGAAGCAATA
CCTCTAAATAAAGCAACACAAAAATACACAAAAGCAGCTCAATACACAAC
CTGCCGATATCCCTTCTCTGGCCTGATGAATCCTCGAGACCCAACCAAAT
ACACCGCAAATGCTGAGTTCCAGAACCATTATCTTAACCTCATTCTTCGT
GATCCAAAAGAGTACCTGAATCAAAATATCATCCACTCTTTAAATGATTT
GAAGGCTCCACTTGTACCCATCAAAGATATATACAAAGAATGCTTGGATA
TTGAAGACTACAACAAGTTTTCAAATATCTCGTCAGCAGGATGCGGGAAC
ATCTCTCTCGAGCACGCCAGTATTAGTATGCTTCACACATTAGGTGGAAA
TAGTGAAGACAACTCTGTTCAACGCGAGTTGATAGCTGGCTCCCATGGTG
ATTTAGGATCAAAAGAAATGGCGGCTTTTgatcctttatttttcttgcaT
ATGTCAAATGTTGATCGTATGTTTTGGATTTGGCAAGAGAAGTACCATCA
TACCACATCAACAATAGTCACGAATAAGAAAGGTAGGGTCGTTTCAAAGC
CTTTTAAGATAAAGGCCAGTGGTAACGGAATCAAACCCAATCAAGGTCAA
GGACCTTCCCCATCGCAACAGGGTGAAGAAATTTTGGGTATGAGTACTTC
ACTACATCCATTTAAATTTGGAGCTCTCAAACAACCCACGGTTACCAATG
ACTTGATCGATATCAAAGGGGAATTGCATTATACATACACAAGAGGCTCA
TTTGATAAGAAAGACCCCTCACGTTAGGTGATTTTCAAGGCTGTACCAAA
CCCCCTCAAGAAAAAGAGAGGGCATTCACATTTTGTCGACAAACATTTTA
TTGGAACAATCAGTAATAGCTTTTCTAATTGAGctaattaatttcaattt
ttcttactTATTTTTAAACCTATTAAACGTCTATTTGTGTAATTTTGTAA
CCTACTATTAGCTTTTTGTTGAAACCCATATTTAATTCATGATAGCACAA
TACAAAATCATTTGTGATTCactcttttttaataagaacaattttatagt
GATGACTAGGCTTAAAATTACCGAAAGATAAGAATAATGCCGAGCCCGGA
A Coding sequence (CDS) from alignment at sc0000635:55896..68196+ >TCONS_00027568 ID=TCONS_00027568|Name=TCONS_00027568|organism=Clytia hemisphaerica|type=CDS|length=1206bp|location=Sequence derived from alignment at sc0000635:55896..68196+ (Clytia hemisphaerica)
ATGATCATCCTACCTACGGGGCTGACTCCTTTTGGAGCATTGCATCAATC
AATGGCCAGCCGTTCACCTCCAAGAGATCGAAACCCCCTNTTTTGGAGCA
TTGCATCAATCAATGGCCAGCCGTTCACCTACAAGAGATCGAAACCCCCC
CAATGCAAACATGGAAAAATGTGGAGAGGACACAGCCAGCATGAAAACGT
TCTTTTTCTCCCTTGGTACCGCGCTTATCTCTTGCGATTGGAAGATGCTT
TGGTACGACATGCTCCAGTCGACAATCTTAAAGTAGCGTTGCATTATTGG
GATGAAACTTCACCAGAATCTTTGGCTAATGGTCTCCCACGCCTCTTAAC
AGATGagtttgttgaaattgataaaaatggaAACACCATTCCCAACCCTC
TCTTAGGATTTACTCTACCAGAAGCAATACCTCTAAATAAAGCAACACAA
AAATACACAAAAGCAGCTCAATACACAACCTGCCGATATCCCTTCTCTGG
CCTGATGAATCCTCGAGACCCAACCAAATACACCGCAAATGCTGAGTTCC
AGAACCATTATCTTAACCTCATTCTTCGTGATCCAAAAGAGTACCTGAAT
CAAAATATCATCCACTCTTTAAATGATTTGAAGGCTCCACTTGTACCCAT
CAAAGATATATACAAAGAATGCTTGGATATTGAAGACTACAACAAGTTTT
CAAATATCTCGTCAGCAGGATGCGGGAACATCTCTCTCGAGCACGCCAGT
ATTAGTATGCTTCACACATTAGGTGGAAATAGTGAAGACAACTCTGTTCA
ACGCGAGTTGATAGCTGGCTCCCATGGTGATTTAGGATCAAAAGAAATGG
CGGCTTTTgatcctttatttttcttgcaTATGTCAAATGTTGATCGTATG
TTTTGGATTTGGCAAGAGAAGTACCATCATACCACATCAACAATAGTCAC
GAATAAGAAAGGTAGGGTCGTTTCAAAGCCTTTTAAGATAAAGGCCAGTG
GTAACGGAATCAAACCCAATCAAGGTCAAGGACCTTCCCCATCGCAACAG
GGTGAAGAAATTTTGGGTATGAGTACTTCACTACATCCATTTAAATTTGG
AGCTCTCAAACAACCCACGGTTACCAATGACTTGATCGATATCAAAGGGG
AATTGCATTATACATACACAAGAGGCTCATTTGATAAGAAAGACCCCTCA
CGTTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00027568-exon-sc0000635-1491911889:55896..55934 | TCONS_00027568-exon-sc0000635-1491911889:55896..55934 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1510915933:55896..55934 | TCONS_00027568-exon-sc0000635-1510915933:55896..55934 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1575043694:55896..55934 | TCONS_00027568-exon-sc0000635-1575043694:55896..55934 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1491911889:61533..61655 | TCONS_00027568-exon-sc0000635-1491911889:61533..61655 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1510915933:61533..61655 | TCONS_00027568-exon-sc0000635-1510915933:61533..61655 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1575043694:61533..61655 | TCONS_00027568-exon-sc0000635-1575043694:61533..61655 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1491911889:61811..61900 | TCONS_00027568-exon-sc0000635-1491911889:61811..61900 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1510915933:61811..61900 | TCONS_00027568-exon-sc0000635-1510915933:61811..61900 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1575043694:61811..61900 | TCONS_00027568-exon-sc0000635-1575043694:61811..61900 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1491911889:63904..63944 | TCONS_00027568-exon-sc0000635-1491911889:63904..63944 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1510915933:63904..63944 | TCONS_00027568-exon-sc0000635-1510915933:63904..63944 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1575043694:63904..63944 | TCONS_00027568-exon-sc0000635-1575043694:63904..63944 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1491911889:66572..68196 | TCONS_00027568-exon-sc0000635-1491911889:66572..68196 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1510915933:66572..68196 | TCONS_00027568-exon-sc0000635-1510915933:66572..68196 | Clytia hemisphaerica | exon |
| TCONS_00027568-exon-sc0000635-1575043694:66572..68196 | TCONS_00027568-exon-sc0000635-1575043694:66572..68196 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| sc0000635 | supercontig | sc0000635:55896..68196 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR002227 | Tyrosinase_Cu-bd |
| IPR008922 | Unchr_di-copper_centre |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008152 | metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0008152 |
metabolic process |
| molecular_function |
GO:0016491 |
oxidoreductase activity |
Blast
The following BLAST results are available for this feature:
|
